Populus euphratica (Euphrates poplar): 105132289
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Entry
105132289 CDS
T05872
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105132289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105132289
Enzymes [BR:
peu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
105132289
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105132289
Multi subunit type E3
ERAD complex
105132289
LMBR1L-GP78-UBAC2 complex
105132289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
CUE
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-RING_16
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
PHD
zf-HC5HC2H
RINGv
Motif
Other DBs
NCBI-GeneID:
105132289
NCBI-ProteinID:
XP_011033991
UniProt:
A0AAJ6URL4
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MGASYLAISAVCTVLSFSVLTGVSLDILRSDGLIFENLTNFEDANHALELLFGSYATIAL
VVNFVFNVFILLNLCLKTIFFGELYPSETQKLVERLINYALYKGTLLPLVIPPTISQIGL
WSIWLTVLCSLKMFQALARDRLERLNASPSATPWAYFRPYSALLLVLSVDFFWIHMCYVI
YRSTGSSMLLLLFFEPFSIAFETMQAMLVHGFQLLEIWLHHSTGNSANCQRLKFFDAIRA
GSLLEWKGILIRDMGFSLDMAALLMALGHYVHMWWLHGVALHLVDAVLFFNIHALLSTII
KRIKGFIKLRMALDALHAALSDATSEELRAYDDECAICREPMAKAKRLLCSHLFHLACLR
SWLDQGLNEIYSCPTCRKPLFVGRPENEANTHTGEALADEQLAHQINEGFDRQNTPGRAL
LDGAFPTQIRNSTESSPWRSAGLDSSWLPPWSGQGADGVGPSTAMRSVGLGGVQMMMRHL
ASVGETYAQSALEDAAWSLWPMSPSQATPSASSTPPAAGGRHPGGTGGLHIRTGSHSTSD
FIANILAMAETVREVLPHVPDELILQDLQRTNSATVTVNNLLHM
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccagttatttagcgatttcagcagtgtgtacggttttgagtttttcggttcta
acaggagtgtcgttagatatattgagatcagatggtttgatttttgagaatcttaccaac
tttgaggatgccaaccatgcacttgagcttctgtttggttcatatgccaccattgcattg
gtggtcaattttgtattcaatgtatttatactactcaatctttgtctcaagactattttc
tttggagagttgtatccttctgaaactcaaaaactagtggaacgtctcattaattatgct
ctttacaagggaacacttttaccactggttattccaccaacaatttctcaaataggtctt
tggtcaatttggctgactgtactatgttctttaaagatgtttcaagcattagctagagat
cgacttgaacgtttgaatgcatctccttctgcaacgccatgggcatattttcgtccatat
tcagcgttgttgctggtcctctctgttgactttttctggatacatatgtgttatgtaata
tacagaagcacaggttcatccatgcttctgttgttgttctttgagcctttcagtattgct
tttgagaccatgcaagctatgctggttcatggatttcagttgcttgagatttggctccat
cattcgactgggaatagtgcaaattgccaaagattaaaattttttgatgcaataagagca
ggttcattgttggagtggaaaggcattcttatccgggatatgggcttttcgctagacatg
gcagccttgttaatggcccttggtcattatgtgcatatgtggtggctccatggtgtggca
cttcatcttgtggatgcggtcctcttttttaatatacatgctttgctaagcactatcata
aagcgtataaaaggatttatcaagcttagaatggctttagatgcccttcatgcagcactt
tctgatgcaacatctgaagagctacgagcatatgatgatgaatgtgctatctgtagggaa
cctatggctaaggccaaaaggctactttgcagtcacctttttcatcttgcttgcttgaga
tcttggttggatcagggtttaaatgagatatactcatgtcccacttgtcggaagccactt
tttgtaggcaggcctgaaaatgaagcaaatacacatactggagaagctctggctgatgag
cagcttgctcatcaaataaatgaaggatttgatcggcaaaacactccaggtcgtgcactg
cttgatggggcattccctacccagattcggaactctacagagagcagcccttggagaagt
gcagggttggattcaagttggctacctccttggtccggccagggtgcggatggggttggt
ccctcaacggctatgagatcagttggactggggggagttcagatgatgatgaggcatcta
gcatctgtgggagaaacttacgcacaatctgctctcgaggatgctgcctggagcctttgg
ccaatgagtccatctcaggctactccatctgcctcttccacccctcctgccgctggtgga
agacaccctggtggcactggtggtttacatataaggactggatcacactccacaagtgat
ttcatagcaaacatacttgctatggctgagacagtgcgggaggttttgccccatgttcca
gatgagttgatactccaggacttgcagcgaacaaattctgctactgttactgtaaataat
cttctgcacatgtga
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