Populus euphratica (Euphrates poplar): 105132454
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Entry
105132454 CDS
T05872
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105132454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105132454
03016 Transfer RNA biogenesis [BR:
peu03016
]
105132454
Enzymes [BR:
peu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
105132454
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
105132454
Transfer RNA biogenesis [BR:
peu03016
]
Prokaryotic type
tRNA degradation factors
105132454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
DUF6293_C
Motif
Other DBs
NCBI-GeneID:
105132454
NCBI-ProteinID:
XP_011034266
UniProt:
A0AAJ6URX6
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MLANPSTSTTLHYSPNSTHNPPFSHTNHRCKLSLSPNCPRFTNFANSKCSSLSLLLSRRK
RERLVTVVKAFEDTSAVNDGPQSLPQPISVKIPVGDRHIMVQTGHLGRQASGSVTVTDGE
TIIYTSVSLDDVPSEPSDFYPLSVNYQERFSAAGRTSGGFFKREGRLKDHEVLICRLIDR
PLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAITAAGIALALSEVPNTEVIAGVRVGLV
DNKFIVNPTTKEMEESKLDLLLAGTDSAIFMIEGYCNFLPEEKLLEAVQIGQDAVRTICN
EVNALVKKCGKPKMLDAIKLPPPELYKHMEEIAGDELVKVLQIRNKVPRRKALQSLEEKV
LRILTEKGYVSKDQSFGIPETVADLLEVEEEDEEVVVDGEVDEGDVHIKPNGRRSSPSLF
SEVDVKLVFKEVTSKFLRRRIVEGGKRSDGRTPEGIRPIDSSCGLLPRAHGSALFTRGET
QSLAVVTLGDKQMAQRVDNLVDEEEFKRFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLA
ERALEPILPSENDFPYTVRVESTITESNGSSSMASVCGGCLALQDAGVPVKCMIAGIAMG
MVLDTGEFGGDGTPLILSDITGSEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLPVMRT
ALLQARDGRKHILAEMLKCSPSPSKRLSKYAPLIHVMKVNPEKVNIIIGSGGKKVKSIIE
ETGVEAIDTQDDGIVKITAKDLSSIEKSISIISQLTMVPTVGDIYKNCEIKSVAPYGVFV
EIAPGHEGLCHISELSSNWLPKAEDAFKVGDRVDVKLIEVNGKGQLRLSRKALLPEATSE
KSSAEQQARDLTEGNTEQSKDKSRATKFVNPTKVDSVEDASLSKKKAYKRLTSSARDGPK
NSSTTVSSMASKDENSLVKGEA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgctagcaaaccctagcaccagcactactctccattacagtccgaattccacacacaac
cctccattttctcacactaatcatcgctgcaagctctctctctcccctaattgccctcgc
ttcaccaattttgcaaattccaagtgttcttcactttctctgcttctatcaagaagaaaa
cgtgaaaggttggttactgtagtcaaagctttcgaggacacttctgctgtaaatgacggc
cctcaatctttgcctcagcctatttctgtcaaaatccccgtcggtgacagacatataatg
gttcagacgggtcatcttgggagacaagctagtggttccgtcacagtcacagatggagaa
actattatctatacatctgtttctttggatgatgttcctagtgaaccttctgatttctat
cctctttctgtaaactatcaagagcgattttctgcagcaggtcgaactagtggaggattt
ttcaaacgagaagggaggttgaaagatcatgaggttcttatttgtagattgatagatagg
cctttgcgcccaactatgctcaagggattttaccatgaaactcagatactatcttgggtt
ttaagctatgatggcttgcattctccagattctttggctatcacagcagctgggatagcg
ttagctctttcggaagtgccaaatacagaagtgattgcaggagttcgagttggccttgtt
gacaacaaatttattgtgaatccaacaaccaaggagatggaagagtcaaaattagattta
ttgctggctggaacagacagtgcaatattcatgatagagggttattgcaattttcttccg
gaagaaaaattgcttgaagcagtacaaattggacaggatgcagtgaggacaatttgcaat
gaggtgaatgctttggtgaagaagtgtgggaaacctaaaatgcttgatgcaatcaaatta
cctcctcctgagctatataagcatatggaggaaatcgctggtgatgagttagtaaaagtg
ttgcaaattaggaataaagtaccaagaagaaaggcccttcaatcactggaagaaaaagtg
cttcgtatacttacagaaaagggatatgtgagcaaggatcaaagttttggaatccctgaa
acagttgcagacttgctagaggttgaagaggaggatgaggaagttgttgtagatggtgaa
gtagatgaaggtgatgtccacataaagccaaatggacgcagatcctctccttcgctgttt
tctgaggtggatgtgaagctggtatttaaagaagttacatccaaattcttgcggagacgt
attgtggagggaggaaaaagaagtgatgggagaactccagaagggatacgtccaattgat
tccagctgtggattactccctagagcacacggaagtgctcttttcacccgtggagaaaca
cagtcattggcggttgttacacttggtgataaacaaatggcacaaagagtagacaacctt
gtggatgaagaggaattcaagaggttttatctacagtactcatttcctccatcatgtgtt
ggagaagtaggccgcataggagcacctagtagaagagaaatcggtcatggaatgcttgct
gagagagctcttgaacctatattgccttctgaaaatgattttccttatactgtacgagtt
gagagtacaatcacagaaagcaatggctcctcaagcatggcctctgtttgtggaggctgc
ttggcattacaagatgctggtgttcctgtaaaatgcatgattgctggcatagcaatgggt
atggttctcgacactggggaatttgggggcgatggaacaccactcattctgtctgacata
accggatcagaagatgcttctggagatatggatttcaaggttgctggaaatgaagatgga
gtaactgcatttcagatggacataaaggttggaggaattactttacctgtcatgaggaca
gcattgctacaagcaagggatggccgaaagcatattcttgctgaaatgttgaaatgctca
ccttccccttctaaaaggctttctaagtatgccccattgattcatgttatgaaggtcaat
ccagagaaagttaacattatcattggttctggtgggaagaaggtgaagagtatcatagaa
gaaactggagtagaggctattgacacacaggatgatggaattgtaaaaattactgcgaag
gatttgtcaagtatagagaagtccatatcaattattagtcaactaactatggttccaact
gttggtgatatctacaagaactgcgagatcaaatcagtagctccttacggagtttttgtt
gagatagccccggggcatgagggactctgccacattagtgaactgagttctaactggttg
ccaaaggcagaagatgctttcaaagttggagatcgtgttgatgttaaactcattgaggta
aatggaaagggacaacttcgccttagtcgcaaagcattacttcctgaagcaacttcagag
aagtccagtgcagagcagcaggcaagggatttaactgaagggaatactgaacagtcaaag
gataaaagccgtgctacaaaatttgtaaatcccaccaaagttgattcagtagaggatgct
tcactttcaaaaaagaaggcttacaagagattaaccagttctgccagagatggaccaaag
aacagtagcacaactgtcagtagcatggcaagcaaagatgaaaatagtttagtgaaagga
gaagcttag
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