Populus euphratica (Euphrates poplar): 105132475
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Entry
105132475 CDS
T05872
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105132475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105132475
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105132475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
BioT2
Motif
Other DBs
NCBI-GeneID:
105132475
NCBI-ProteinID:
XP_011034310
UniProt:
A0AAJ6USU2
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MTQNDADMDETEEEESPKEPQTLQTVTATQLSSSVSNLSASSRAIPSNKDFHFYYNFDEF
KIPIQEIAEKSQSLLESIGSSSSNHIFKDRLQFPTDVDIDEAYDWLVNVNDEIFERFDAS
IDEFRRVREETDRVVGVDSEDGFQLVLGKKNKKSMKKTVSHDSVSRAGGDSGVKVADNKK
WILGNKAKVPFHIPTIRRPQEEHNILVNNSNRAFDHVWLERSEDGLRVIHPLERLSVLDF
MDKSTGDVEPAPPLPIESTTFKLVEEVKDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTC
LMQISTRTEDFIVDTLKLRIHVGPYLREVFKDPAKRKVMHGADRDVVWLQRDFGIYICNL
FDTGQASRVLKLERNSLEHLLHHFCGVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLH
IYDLMKALLLSKPIDNENADPPLLEVYKRSYDVCMQLYEKELFTENSYLNMYGLPSAGFN
AQQLAIVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMPVTTSKLRQLLKSKHSYVE
RHLSSVVSINRHSMQTSAAFEAAVQHLKERHMEIASQEETEANDGSEAQSIPGGNGMNSG
VAACHETSAQLEKGLLKQGSSIVELGRGGQGSSAKHRGENVEVNTGSSSYISDTSTTAKV
AGATVQVLKKPTGAFGALLGGAVAKRTLDTDKKIEEKIKLEKIRSSVNLPFHSFMGINEP
PKLVVEEPIGVSEISHPEESLDVPATGSSLQDIILLDNDSDMEQNTHIAEPDRDDSKTTN
VNGDDKSSGSALETDGEEPVSLADLSMSFQHCFPSGNQNKKTSEVKKSGEPSGGLKLKPF
DYTTALRSEEDPAGRLKVGSAKNQRGVLDSVGTIKSSPGAKMQKDDETGEYRQGRRRQAF
PATGNRSATFR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaacgacgcggatatggacgaaacggaagaagaagaatcccccaaagaacct
caaactttacaaaccgtaacagctacccaattatctagctcagtttcaaacctctccgcc
tcctctcgcgcgattccatcgaacaaagacttccatttctactacaatttcgacgaattc
aagatcccgattcaagaaatcgcagagaagtcgcaatcgctactcgaatcaatcgggtct
tcctcttcaaatcatattttcaaagacaggttacagttccctactgatgtcgacatcgat
gaggcgtatgattggctggtgaatgtaaacgacgagatttttgagcgtttcgatgcttca
attgatgaatttaggagagtccgagaggaaacggatcgggtcgtgggtgtagatagtgag
gatggttttcaattggtgctagggaagaagaataaaaagtcaatgaagaaaacggtgagt
catgactcagtgagtcgtgctggtggtgactcaggagtgaaagtggcggataacaagaag
tggattttgggaaataaggccaaggttccgtttcatataccgacgataaggaggccgcaa
gaggaacataatatattggttaataattcgaatagggcttttgatcatgtttggttggag
agaagcgaagatgggctgagggttattcatccactggaaaggctatctgttcttgatttc
atggataaaagtactggagatgttgagcctgcaccacctcttccaatagagagtactaca
tttaagcttgtggaagaagtcaaggatttgaaggagttggcagctaaattgcgtggtgta
aatgaatttgcggttgatttggagcacaatcaatatcgatcttttcaaggattgacatgc
ttaatgcaaatttctaccagaactgaggattttattgtagatactttaaaacttcgaata
catgtcggcccatatcttagagaagttttcaaggatcctgccaagagaaaggtcatgcat
ggagcagatcgagatgttgtgtggcttcaacgggactttggcatatatatctgcaatctt
tttgataccggacaggcctcaagagtgctgaaattggaaagaaatagtttggagcacctc
ttacatcacttctgtggggttactgccaataaagaataccagaatgcagattggagacta
cgccctcttcctgatgagatgataagatatgccagagaagatacccactatctgctgcat
atatatgatctgatgaaagctctgttactctcaaagcctattgacaatgaaaatgctgat
cctcctttgttagaggtctacaaacgcagttatgatgtctgcatgcagctgtatgagaag
gagcttttcactgaaaactcgtatctcaacatgtatgggttgcctagtgctggtttcaat
gctcagcagcttgccattgttgcagggctttatgagtggagagatgccattgctcgtgca
gaagatgagagcacaggttatatattgcctaacaaaactcttcttgaaattgccaaagag
atgcctgttacaactagcaaattacgtcaactgctgaaatcaaagcactcatatgttgaa
cggcaccttagttctgttgttagcatcaataggcactccatgcaaacctctgctgcattt
gaagctgctgttcaacatttaaaggagagacacatggaaatagcctcacaagaagagaca
gaagctaatgatggatctgaagcgcaaagcattcctggtggcaatggaatgaacagcggt
gtggctgcctgccatgaaacttctgcgcagctggaaaaggggcttctgaagcagggaagc
agtattgttgaacttggcagaggtggacaaggaagctctgccaagcaccgtggtgaaaat
gttgaagtgaatactgggtccagtagttatatttcagatacatctactacagctaaggtt
gctggagcaactgttcaggttctcaagaagccaactggtgcttttggagcacttcttggg
ggtgcagttgcaaaaaggacacttgatactgataaaaagatcgaggaaaagatcaagtta
gaaaagataagatcctcagtaaaccttccattccattcatttatgggcatcaatgaacct
ccaaaactagtagtagaagagcccattggagtttctgaaatttcacatcctgaagaatct
ttggatgtcccagctactggttctagtttgcaagatataatactgttggacaatgattca
gacatggaacaaaacactcatattgcagaaccagatagagacgattccaaaactacaaat
gtcaacggggatgacaaatcttcaggatctgctttggaaacagatggagaggaacctgtt
tctctagctgatttgtctatgagtttccaacactgtttcccatccggtaatcaaaataaa
aaaacttcagaagttaagaaatctggagaaccaagtggcggtttgaagctgaagccattt
gattatactactgcactaagatctgaagaagatccggcaggtaggttgaaagtagggagt
gccaaaaatcagaggggcgtgcttgactctgtggggacgataaaaagttcaccgggagct
aaaatgcaaaaggatgacgagacaggagaatatcgccaaggcagaagacgtcaggccttt
ccagcaactgggaatcggagtgcaaccttccgatga
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