Populus euphratica (Euphrates poplar): 105132515
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Entry
105132515 CDS
T05872
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105132515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105132515
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
105132515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
DNA-PKcs_N
Motif
Other DBs
NCBI-GeneID:
105132515
NCBI-ProteinID:
XP_011034378
UniProt:
A0AAJ6URP1
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MARNKEGLVLLLDVGPTMHGVLPEIKKVCSLLIQKKLIYGKFDEVGVVVFGTQATDNELT
KEVGGYEHVVVLRNIKVVDGDLVDAFQELPRGNFDGDYLDAIVVGMDMLIKKYQATNKGK
KRLCLITNALCPIKDSCEGTKEDQVNTIAAQMSAHGMKMESVIVRGRLCGGGDQRIMAEN
DQLLNLFSEKTSARAVYVESPTALLGAVKTRNISPVTIFRGDLELGSKMKIKVWVYKKTS
EEKFPTLKKYSDKAPPSDRFATHEVKVDYEYKSVEDPNKVVPPEQRIKGYRYGPQVVPVS
SAEWDAVKFKPEKSVKLLGFTDASNIMRHYYMKDVNVFIPEPGNARAALAVSALARAMKE
MNKVAILRCVWRQGQGSVVVGVLTPNISEKDSTPDSFYFNVLPFAEDVREFQFPSFSSFP
VSWQPNEQQQEAADNLVKMLDLAPSAKQEALLPDFTPNPVLERFYRHLELKSKHPDAAVP
PLDETLKTITEADPDLLSEKKNVIDAFFKSFELKENPRLKKSSKRLLEKKPSGSDEDYQE
TTNALAINPVKVEKIGDSSPVQDFEAMMSRRDSPDWVSKAIQDMKNKIYSLVENSYDGDN
HGKALECLLALRKGCILEQEPKQFNDFLHHLFNVGQEKKLRNFCESLIPKGLTLISKSEA
IDSEVTDDEARNFLVKKELKFE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacaaggaaggattggtgctgctactcgatgtcggtccaacaatgcacggt
gttcttcctgaaatcaaaaaagtttgctccttgcttattcagaaaaagttgatttatgga
aaattcgatgaggttggagttgttgttttcgggactcaagcgactgacaatgagctgacg
aaagaagtaggtgggtacgagcatgttgtcgtcttacgaaatatcaaagttgttgacgga
gatcttgttgatgcatttcaagagctccctcgaggaaactttgatggagattatcttgat
gctattgttgttggaatggatatgctgataaagaagtatcaagcaacaaacaaaggaaaa
aagcgtctgtgtcttattacaaatgcactgtgccctattaaagattcatgtgaagggacc
aaggaagatcaagtgaacactattgcagctcaaatgagtgcacatggaatgaaaatggaa
agtgttattgtgaggggaagattatgcgggggtggagaccagagaataatggctgaaaat
gatcaactgctgaatcttttttcagagaaaacatctgccagggcagtgtatgttgagagt
ccaactgcattgttaggtgcggttaaaactcgaaatatatctccagtaacaatattcaga
ggtgatcttgaacttgggtccaagatgaagattaaggtgtgggtctacaaaaaaacctcg
gaggagaaatttcccactctgaagaaatattctgataaagcgcctccaagtgacagattt
gcgacgcatgaagtcaaagtagattatgagtacaaaagtgtggaagatcctaataaggtt
gttcctccagaacaaagaattaagggttacagatacggaccacaagttgttccagtatca
tctgctgagtgggatgctgtcaaattcaaaccagaaaaaagtgtgaagcttctaggattt
actgatgcttcaaacataatgcggcactactacatgaaagatgtcaacgtctttattcct
gaaccaggcaatgcaagggctgctcttgcagtttctgctttagctagagcaatgaaggaa
atgaataaggttgcaattttgcgatgtgtctggagacaaggacaagggagtgttgttgtg
ggggttttgacacccaacatatctgagaaagacagcactcctgattcattttacttcaat
gtgcttccttttgccgaggatgtccgggaatttcaatttccatctttcagcagtttccca
gtttcatggcagccgaatgagcagcagcaagaggccgcagataaccttgtaaagatgctt
gatcttgcaccatctgccaaacaggaagctctactgcctgatttcacaccaaatcctgtt
ttggagcggttttatcgtcatcttgaattaaagtcaaagcatccagatgcagctgtgcct
ccactggatgaaactctcaaaacaataactgaagctgatccagatcttctttctgaaaag
aaaaatgtaattgatgcattttttaagagctttgaactcaaggaaaatccaaggctaaag
aaatcaagcaagcggttattggagaaaaaaccctctggttctgatgaggattatcaagag
acaaccaatgctctagctatcaaccctgttaaggttgaaaaaattggggattcaagtcca
gttcaagattttgaagcaatgatgtcacgcagagatagtccagattgggttagtaaagca
attcaggatatgaaaaataaaatatatagcctggttgagaattcctatgatggggataat
cacggtaaagcattggaatgtctacttgcccttcgcaaaggttgcatccttgagcaagaa
cctaaacagttcaatgatttccttcaccatcttttcaatgtcggccaagagaaaaagctt
cgcaatttctgtgaatccctcatacccaaaggactcactttgatttcaaagtcagaagcc
atagacagtgaggttacagatgatgaagctagaaactttctggttaaaaaagagctgaaa
tttgagtga
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