Populus euphratica (Euphrates poplar): 105132712
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Entry
105132712 CDS
T05872
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105132712
03036 Chromosome and associated proteins [BR:
peu03036
]
105132712
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105132712
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105132712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HHH_9
SPT6_acidic
Spt6_S1
Tex_central_region
HTH_44
S1
Tex_N
Motif
Other DBs
NCBI-GeneID:
105132712
NCBI-ProteinID:
XP_011034668
UniProt:
A0AAJ6URB3
LinkDB
All DBs
Position
Unknown
AA seq
1626 aa
AA seq
DB search
MKKAKRKLPFTLFDEDDEEEEVAVKEKRAQNVSVDDDEDGLDKFETDGFIVDYNEEEVEG
DCDGKDEQMKKKMRKKKSLKNLVLVDDDHLELLRENQKPGLFQTKRVGNKKFKRLKKAKG
CALRKDSGLSDDDVSLYDDSAEENEAMYDDINDMTDFIVDDDERYKKRAPMRLWELKEKK
SRLVTMASSSSLEEAGYVFGDADELLKRQVLAKIVKPDDYENFELDHFMAGRDDHVKKTD
LPERMQMSEEITCTALVGETRRQEESSWILNQLITNMHPLLCNKKAQEGNGVGLLKKINK
EDIARFLEMHDLEKYDIPFIAMYRKEKCLGMLEDPGEDGIQNECSNDTEGKPRVKWHKIL
WAIIELDRKWLLLQKRKSMLEESYKKRYEEECNNIDDMARLSLINLHFDTIMKSLMLAET
EKDIDDVSMKFSLHFPPTEEVMEGKFKRRERRSAYSDYIKAGLWQLAIKFVYSSKQFCLH
LHQEKMGMDFWEDLNESPEVIASKFTCASLETPEAVLKGARHIAALEISCEPSVRKHARG
FFTDEALVSTRPTPKGAKEIDFCHQFSSVKWLRDKPLGKFQDAQWLLIQKAEEEKLLEVN
IKLPEDSLNKLISYSHKIYLAGGDDGHTQLWDEQRKLILQDVISNCLLPSLEKETRALLT
TRAKCLVLMEYGEQLWNRASVAPYPHKQNVAGLEEGTGPRVMACCWGPGKPPTTFVMLDS
CGQLLDVLQSGSISLQSQNVTGLQRKKHDQLRVHKFIISHQPDVIVLGAANASCPRLKDD
IKEIVLRIEESSIDADQVLNGIGVIYGDETLPQLYEKSEVSLRHFPGQEGIVKRAVALGR
YLQNPLAMIATLCGVQKEIVSWKLTSLDHFLTPEEKYGMIEMLMVDITNQVGVDINAAVS
QDWLSAPLQFVSGLGSQKAAFLQRGLAAGKIVSNRKELAICGLTEKKIFFNAVGFLRVCC
GEILSSRSEYDMLDGTRIHPESYGLAEKLVKDVYDDVAEAHPLKHVRDNPQLLKDFDINA
YADNFEVERGENKKLTLCDIKTELLHGFLDPRRPYEEPTQDEEFCLISGKNEDAFAEGRI
VQAIICRVLSQRAFCALDSGLTGMITKDDYSDEAADYSLTKRLREGDILTCKIKQIDKSR
HQVLLTCKESELKSSRDQNLHELEPYYCGGQSSLVSHREIACKEDLKNKHFISRMIIHPH
YENMTQNQAVEFLADKDVGERVFRPSSRGLHYLTLTVKVFNGLYVHKDIIEDGKNLKDIS
SMLDLGKTLKIGDDIYKDLDEVISQYVDPLVTHLKAILSFRKFKKGSKAEVDELLKSEKS
DYPMRIPYCFGVSYEHPGTFILFYIRTNLHHEYIGLHPKGFKFRKQTFRKVEQLVAYFQK
HIDDLKHQPVQMTRPVTGSCARASTECGNEGGWKGQLNSSKDELATHVFAGKKDCTRDDG
GTGGHGSGRGHGHPSGLPRPDCVRGCGNRGGLGNGRGGNNRNGSDSGNNTSYWHDSDGNS
DAGSSYSWGNKTSGNASSWGNNVGGNASSSSWGGNGHPVNAGGHNSGGSGDDCQGIPGSG
PPNVSDWMGSNKEGGNNFCGTEGSSGGNLGGFNTNSESGNTGWGAGSRKSSLHPAGEDGW
SGGGGW
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcaaagagaaaattgcccttcactttattcgatgaagatgatgaagaggaa
gaagtggcagttaaggagaaaagggcccaaaatgttagtgtagacgatgatgaagatggt
ttggataaatttgagactgatgggtttatagtggattataacgaggaagaagtggaaggt
gactgtgatgggaaagatgagcaaatgaagaagaaaatgaggaagaagaaatctttaaag
aatcttgtccttgttgatgatgatcatcttgagttgctccgagaaaatcaaaagccaggc
ctgttccaaacaaagagagttggaaataaaaaatttaaacggctcaaaaaggccaagggc
tgtgctctgagaaaagactctggattgtctgatgatgatgtatcattatatgatgatagt
gctgaagaaaatgaagctatgtatgatgacataaatgacatgacagattttattgtagac
gatgatgaaagatacaagaaaagagcccccatgaggttgtgggagctgaaagaaaagaag
tcaaggctagtaacaatggcttcttcttcttccctagaggaagctggctacgtatttggt
gatgccgatgaactccttaagcgtcaagttctggctaagattgtcaagccagatgattac
gaaaactttgaactggatcattttatggctgggagggatgatcatgtgaagaagactgat
ttacccgagaggatgcagatgtcagaggaaatcacttgcactgctttagttggcgaaaca
agaagacaagaggagagttcttggatacttaatcagcttatcacaaacatgcatccattg
ctgtgtaataaaaaagctcaggaaggaaatggagtaggtctgcttaagaagattaataag
gaagatatagcaaggttcttggaaatgcatgatttggaaaagtatgatattccatttatt
gctatgtatcgaaaagagaaatgccttggtatgttggaagatccgggggaagatggtata
caaaatgaatgtagcaatgacacagagggaaaacctagagtgaagtggcataagattctc
tgggccatcattgaactggacagaaagtggttgcttctccagaaaagaaagagcatgctt
gaagaatcctataagaagcgttatgaagaggaatgcaataatattgatgacatggcaaga
ctttctttgatcaatcttcactttgacacaatcatgaagtctctgatgctggctgaaaca
gagaaggatattgatgatgtcagtatgaagtttagcttgcattttcctccaactgaagag
gtcatggaaggaaaatttaagagacgagagaggaggtcggcatacagtgactacattaag
gctggtttgtggcagcttgcaataaagtttgtctacagctccaagcaattctgcctgcat
ctccatcaagagaaaatgggaatggatttttgggaggatcttaatgaatctcccgaggtg
atagcttcaaagtttacatgtgcaagtttagaaactccagaagcagtgcttaaaggagcc
aggcacatcgctgctctggagattagctgtgagccttctgtcaggaaacatgcccggggt
tttttcactgacgaagctctagtctcaaccagaccaactcccaaaggagccaaggagatt
gatttctgccatcagttttcatctgttaagtggctacgtgataagccccttggtaaattt
caggatgcacagtggcttcttattcagaaagctgaagaagagaagctccttgaggtaaac
ataaaattgcctgaagattctctgaataagttgattagttactctcacaaaatatatctt
gcgggaggtgatgacgggcatacccaactctgggatgaacagcgaaagttaatacttcag
gatgtgatttcaaattgtctccttccttcattggagaaggaaactcgtgccttgttgacc
acaagagcaaaatgtttggtgcttatggaatatggagagcagttatggaacagagcatct
gttgccccatatccacacaagcagaatgttgctggcctggaggaaggtactggaccaagg
gtcatggcttgctgctggggtcctggaaagccaccaactacgtttgtaatgttagattca
tgtgggcaattgcttgatgtgttgcaatctggatccattagtctgcagtctcagaatgtt
actggcctacaacggaagaaacatgatcagctacgtgtccataagtttattataagtcat
cagcccgatgttattgtccttggtgcagcaaatgcatcctgtccacggttgaaggatgat
atcaaagagattgttttgaggatagaggaaagttctatagatgctgaccaagtgctaaat
gggattggtgttatttatggagatgaaaccttgccccagctttatgaaaaatcagaagtt
tcattgcgccattttcctggacaagaaggcattgtcaaacgagctgtggctctggggcgg
tacctgcaaaatccattggctatgattgctacactgtgtggtgtccagaaagagattgtt
tcttggaagcttacctccttagaccactttctaacacctgaagagaagtatgggatgatt
gaaatgctgatggtggatattaccaatcaggttggtgtggacataaatgctgctgtaagc
caagactggctctctgctcctcttcagtttgtatctgggcttgggtctcagaaggcagcc
tttctacagagggggttggctgctggtaaaatagttagtaatcgaaaagagttggcaatt
tgtggattgacagaaaagaaaattttctttaatgcagttggctttttgcgtgtctgttgt
ggggaaattctctcttctcgaagtgaatatgatatgttggatggaacaagaattcatcct
gaatcatatggtcttgcagagaaattggttaaggatgtctatgatgatgttgctgaggca
catcccttaaaacatgttagggacaatccgcagctgctgaaagattttgatattaatgct
tacgctgataattttgaagtagagcgaggagaaaataagaaactgactctttgtgacatc
aaaactgaacttttgcatggatttcttgaccctcgtcgtccatacgaagaacctactcag
gatgaggaattctgtttgatatctggcaaaaatgaggatgcatttgctgaaggaagaatt
gtacaggctattatttgcagagttctgtcccaacgagcattttgtgcacttgactctggc
ttgactggcatgatcacgaaggatgattattcagatgaggccgctgattattccttgaca
aagaggctacgagaaggtgatattcttacctgtaagataaaacaaattgacaagagcaga
caccaggtgcttttaacttgtaaagaaagtgaactgaagagttcgagagaccagaacttg
catgagcttgaaccttattattgtggaggtcagagcagtttagtaagtcatcgggagata
gcctgcaaggaagacctcaaaaataaacatttcatttcaaggatgattattcatcctcat
tatgaaaatatgacgcagaatcaggcagtggagttcctggcagacaaggatgttggcgag
cgtgtttttcgtccaagttcaaggggattgcattatttgactctaaccgtgaaagtcttt
aatggactttatgttcacaaagacataatcgaagatgggaagaacctcaaagacatctca
agcatgcttgatcttgggaaaacattaaagattggagatgacatttataaggatttagat
gaggttattagtcaatatgttgacccgttggtgacccacctgaaagcaattctaagtttc
cgaaaatttaagaagggctcaaaagcagaggttgatgagctcttaaaatctgagaaatca
gattatccaatgaggataccttactgctttggcgtttcgtatgagcatcctggaactttc
atcttgttttacataagaacaaatctacatcatgagtatataggtctgcatcctaagggg
ttcaaatttaggaagcagacattcaggaaggttgagcagctcgttgcatatttccagaaa
catattgatgatctaaagcatcaaccagtacagatgacaagacccgttactggttcttgt
gctagagcatccactgagtgcggtaatgaaggtggttggaaaggccagctaaactcaagc
aaagatgaactggcaacacatgtctttgcaggcaaaaaagattgtactcgagatgatggt
ggcacaggtggtcatggtagtggtcggggacatggacatcctagtgggttacctcggcct
gattgtgttcgtggatgtgggaacagaggtggcttaggtaatggaaggggtggtaacaac
cgcaatggaagtgactctggaaacaatacctcttactggcatgatagtgatggaaattca
gatgctggctctagctacagttggggcaacaaaaccagtggaaatgctagcagctgggga
aacaatgttggtggaaatgctagcagttccagttggggtggcaatgggcatcctgtgaat
gctggtggtcacaattcgggcggaagcggtgatgattgtcaagggatccctggaagtggt
cctccaaatgttagtgattggatgggtagtaacaaagagggagggaataatttttgtggt
actgagggcagcagtggtggaaatcttggagggtttaatactaattctgagtctgggaat
actggatggggcgctggttctagaaagagttccttacaccctgctggtgaggatggatgg
tcaggaggtggtggttggtga
DBGET
integrated database retrieval system
