Populus euphratica (Euphrates poplar): 105133684
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Entry
105133684 CDS
T05872
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105133684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105133684
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105133684
mRNA degradation factors
5'-3' decay
Decapping complex
105133684
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
105133684
NCBI-ProteinID:
XP_011036076
UniProt:
A0AAJ6UVL2
LinkDB
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Position
Unknown
AA seq
789 aa
AA seq
DB search
MERSDGKDFKEFTDSSSGALFDASRYEFFGQHDVEEVELGGLEDEGDNPVLGPADDEYRL
FDRDEGVSLGSLSEIDDLASTFAKLNRVVTGPRNPGVIGDRGSGSFSRESSSATDWAQDG
EFAGWLDQQMFCAENAQDSKRWSSQPQPSSARFSESKPLYRTSSYPQQPLQQPHFSSEPI
HLPKSNFTSFPPPGASPHQLNVASRAGGLQSHLSAPNLSPLSNSNLHLAGLQHGLHYGGN
LPQIMSPGLSFNNRPQKHWLNHAGLLHVDQSRLLESILQQQLSHQNGLMSAHLMSPQQQL
QQQRLQSSLQPSLPHFAAMQSHFFNSHPSSLHIRDQKHKSSSQRNRRFSQGSDTSSQKSD
SGWVQFRSKHMTADEIESILKMQHAATHSTDPYIDDYYHQASLAKKSTGSRIKHNFCPSH
MKELPSRSRNSADQHSHLHFDALGKIPLPPIRKPRPLLEVDYPSSGDGNSEQISERPLEQ
EPMLAARITIEDSLSLLLDVDDIDRFLQCNQSQDGGAQLRRRRQNLLEGLAASLQLVDPL
GQTGQSVGLASKDDIVFLRLVSLPKGQKLICKFLQLLFPGNELTRVVCMAIFRHLRFLFG
GIPSDTDAADTTTNLTKTVSACVNGMDLHALSACLVAVVCSSEQPPFRPLGSPAGDGATV
ILKCLLERASKLLHGPQASANCAMPNFALWQASFDEFFDLLTKYCLIKYDTILHSVYAKT
PPSTEGIDLEVRAATKQEMPVELLRACLPHTNDRQMELLRHFGQQRKTSTGLSAHPGNSG
LINSESVRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagcgatctgatggcaaagatttcaaggaattcactgactcttcttcgggtgcactc
tttgatgcttcacggtatgaattttttggtcaacatgatgtggaagaagtggagttgggt
ggtttagaagatgaaggtgacaatcctgtgcttggacctgccgatgatgagtatcgtttg
tttgatagagatgaaggtgtaagtttaggatctttatctgaaattgatgatctggcaagt
acttttgcgaagttgaacagagttgtaaccggaccaagaaatccaggagttattggtgac
agaggatctggatcattttcaagggaaagttcatctgctactgattgggcacaagatgga
gagtttgctggctggttagatcaacaaatgttttgtgcagaaaatgctcaggacagcaag
agatggtcatcacagccccagccttcttcggctcgtttctcagaatctaaaccattgtac
agaacttcctcatatccccagcagccactgcagcagcctcacttctcaagtgaaccaatt
catttacccaaatcaaatttcacatctttccccccacctggtgcttcgccacaccaactc
aatgttgcttctcgtgctggtggactgcagtcgcacttgtctgctccaaacctctctcct
ttgtccaactctaatcttcatctggctggtttacagcatgggttgcattatggtggaaat
ctgccccagatcatgtctcctggcctttcttttaataataggccacaaaaacattggctt
aatcatgctggtctgttacatgtagatcagtctaggctcttagagagtatcttgcaacaa
caactatcgcatcaaaatggcctaatgtctgcccatttgatgtcaccacagcagcaatta
caacagcagcgactgcagtcttcacttcaaccatcactgcctcattttgcagcaatgcaa
tctcatttctttaattcccatccttcatcattgcatatcagggatcaaaaacataaatca
tcctctcaaagaaaccggcgcttttcgcagggatctgacactagtagtcagaaaagtgat
agtggctgggtgcaattccgatccaagcatatgacagctgatgaaatagagagtattctg
aaaatgcagcatgctgccactcatagcactgacccatatatagatgattactaccaccaa
gcttctcttgccaagaaatctactgggtcaagaattaaacacaatttctgcccatctcac
atgaaggagctcccttctcgatctcgtaacagtgcagatcagcattctcatctccatttt
gatgctctcgggaagattcctctcccacccatacggaaacctcgcccccttcttgaagtt
gattatcctagttctggtgatggaaactctgaacaaatctctgagaggcctttggaacag
gaacctatgcttgcagctagaatcactattgaagatagcttatctcttcttcttgatgta
gatgatattgatcgtttcctgcagtgtaatcagtcccaggatggtggggctcagctcagg
cgtaggcggcagaacttgcttgaaggcttggcagcatcactccagcttgttgacccactt
ggccaaactggccaatctgttggactggcctcgaaggatgacattgtgttcctgcggtta
gtatctcttcccaagggtcaaaagcttatctgcaagtttcttcagcttctattccctggc
aatgaactcacccgtgttgtctgcatggctattttccgtcacttgagatttttgtttggt
ggcattccctcggatacagatgcagctgacacaactacaaatctcacaaagacagtttct
gcatgtgtaaatggcatggatcttcatgcattgagtgcttgcctggttgcagtagtttgt
tcttcggagcagccaccttttcggcctcttggcagtcctgctggggatggggccacagtt
attttgaaatgtcttcttgaaagagctagtaaactattacatggtcctcaggcttctgcc
aactgtgctatgcccaattttgctctttggcaggcatcatttgatgagttctttgatctt
cttacgaagtactgcctgattaaatatgacaccatactgcattcagtctatgcaaagaca
ccacctagtacagaaggtattgatttggaggtgcgtgcagctacaaaacaagaaatgcct
gttgagcttttacgagcttgccttcctcatacgaatgaccgccagatggagctcttaaga
cattttgggcagcaacgcaaaaccagcactgggctgagtgcacatccagggaatagtggc
ctcataaactctgaatcagtgaggagttga
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