Populus euphratica (Euphrates poplar): 105134091
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Entry
105134091 CDS
T05872
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105134091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105134091
03036 Chromosome and associated proteins [BR:
peu03036
]
105134091
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105134091
Coactivators
SAGA/TFTC/STAGA complex
105134091
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105134091
STAGA complex
105134091
TFTC complex
105134091
SAGA complex
105134091
SLIK complex
105134091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD_LRWD1
WD40_like
RAB3GAP2_N
Cytochrom_D1
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
105134091
NCBI-ProteinID:
XP_011036668
UniProt:
A0AAJ6XZ74
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MDEEAVVKFVETYLKKKGFKQAELAFHEEIQQQQQNNSNNAISIHSDPDLSSLLHSLSQP
EDSPARYQDEYSKLRSWAYGSLDLYKHELLRVLYPVFVHCYMDIVAKGHIQEARNFFNSF
REDHEMMHSRDLQKLEGVLSPSHLEEMEFAHTLRQSKVNIKICQYSNELLLQHLRKSKCA
IILGIVNEHINFQVSPGQPISISDDPDAVTLIGSSQDAANQINKKEIRWGLLEDSIEERL
EKTGGFLSDSKKTEGETKEGDMDENKKRSIDGGKQGASIKKSKKDKAASATTKIARPEAN
TVSAVPRVKPELPLPVISFRPTEVEQSILEDLRNRVQLSSVTLPSVSFYTFINTHNGLNC
SSISHDGSLIAGGFSDSSLKVWDMAKLGHQAGNSILQGENDASPSEPGQSTNSGKRSYTL
FQGHSGPVHSTTFSPAGDFILSSSADTTVRLWSTKLNANLVCYKGHNYPVWDVQFSPVGQ
YFASASHDRTARIWSMDRIQPLRIMAGHLSDVDCLQWHANCNYIATGSSDKTVRLWDVQS
GECVRIFIGHRSMILSLAMSPDGRYMASADEDGTIMMWDLSSGRCISPLIGHNSCVWALA
FSCEGSLLASGSADCTVKLWDVTTSTKAPRTEESKSGNTNRLRLLKTLPTKSTPVYTLRF
SRRNLLFAAGALAKSQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagcagtagtgaaatttgtggagacatatttaaagaagaaagggttcaag
caagcagagctcgctttccatgaagaaatccagcagcagcagcaaaacaacagcaataat
gctatcagtatccactcggatcctgatctctcttccctccttcactccctttctcaacca
gaggatagtccggcacgttaccaagatgagtatagtaaactaaggtcgtgggcttatggt
tcgcttgatctgtacaagcatgagctgcttcgtgtgctttatccagtatttgtccattgt
tatatggatattgttgctaaaggacatatccaagaggcaagaaattttttcaatagcttc
cgtgaagatcatgagatgatgcactcacgagaccttcaaaagttggaaggggttctttct
ccgtctcatctggaggaaatggaatttgctcatactcttaggcagagtaaagtcaacatt
aagatatgtcagtactccaacgagctcctgttgcagcatcttcggaagtcaaaatgcgct
ataattctggggattgtcaatgagcatattaacttccaagtttctcctggacaacccatc
tcaatttctgatgatcctgatgctgtaacattaattggaagcagccaggatgcagctaat
cagataaataaaaaagaaatacgttgggggttgcttgaagattctatagaagaacgattg
gagaagacgggaggttttctctcagattctaaaaagacagaaggagaaaccaaagagggg
gacatggatgagaataagaaaagatcaatagatggtggaaagcaaggagcttcaatcaaa
aagtcaaaaaaggataaagctgctagtgcaacaactaaaattgctcgtcctgaagctaat
acagtatctgcagtaccacgagtcaaacccgagcttcctttgccagtaatttccttcagg
ccaactgaggtggaacagtctattcttgaggacttgagaaaccgtgtacagttgagtagt
gtgacactgccatctgtcagcttttatacctttatcaacacgcataatggtttaaactgt
tcatcaatttcacatgatggatccttgattgctggtggattctcagactcctcactgaag
gtttgggacatggcaaagcttggacatcaagctggcaattctattttgcagggtgaaaat
gatgcttctccgagtgaaccaggccagagtacaaacagtggcaaaagatcttatacattg
tttcagggtcattcaggtccagttcattcaaccacttttagccctgctggggattttatt
ttgtcgtcttcagcagatacgacagttcgattatggagcacaaaactcaatgcaaatctt
gtttgctacaagggccataattaccctgtctgggatgttcagttcagtcctgtgggacaa
tattttgccagtgcttcacatgatcgcacagcaaggatttggtctatggataggatacag
cctttgaggataatggcaggtcatttgtctgatgttgattgcttgcaatggcatgccaac
tgcaactacatcgccactggctccagtgacaaaacagttagactgtgggatgtacaaagc
ggggagtgtgtccgcatttttattggtcataggagtatgattttatcattggccatgtca
cctgatggtcgatatatggcatctgctgatgaagatgggacaatcatgatgtgggacctc
tctagtggccgctgcatatcacctttgataggccacaattcatgcgtatgggcactcgcc
ttcagttgtgaaggatctcttctagcatctggttcagctgactgtactgtaaaattatgg
gatgttactacaagcacaaaggccccaaggacagaagaaagcaagagtggaaatacaaac
agattgagattgttaaaaactttgccgacgaagtctactccagtttacactttgaggttt
tcccgtaggaatctgcttttcgctgctggagccctcgctaaaagtcagtga
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