Populus euphratica (Euphrates poplar): 105134541
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Entry
105134541 CDS
T05872
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03030
DNA replication
peu03410
Base excision repair
peu03420
Nucleotide excision repair
peu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105134541
03410 Base excision repair
105134541
03420 Nucleotide excision repair
105134541
03430 Mismatch repair
105134541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peu03032
]
105134541
03400 DNA repair and recombination proteins [BR:
peu03400
]
105134541
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105134541
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105134541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RCF1-5-like_lid
Rad17
AAA_22
AAA_30
AAA_19
AAA_assoc_2
RuvB_N
BRCT_2
RNA_helicase
nSTAND3
Sigma54_activ_2
AAA_18
AAA_24
AAA_5
AAA_14
AAA_6
Zeta_toxin
AAA_17
AAA_16
NTPase_1
DNAX_ATPase_lid
TsaE
Motif
Other DBs
NCBI-GeneID:
105134541
NCBI-ProteinID:
XP_011037296
UniProt:
A0AAJ6UXN7
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MQRDIRKWFMKAHDKGNDNAEKKPPPTEPKTETPVCGGQEGSGRRKTSKYFVANKQKQKE
DKEVEDLPVKRKAQNDDFQSVKPPPSKKVHKFDDEEEDDDDFSLPKKKNAASPSKKLKSS
SGRGIAQKPVHVNESDEDDAKDTESPLKSGGRGRGGRGVSGAPSGGRGRGGGRGGFMNFG
ERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTS
YLLCDEDIEGRKSSKAKELGTPFLTEDGLFDKIRSSKNSKAPAREDSKVSVEKVASLPKK
SPQKADLKSKSLMSNAAHKDLGAGSQQAKQKDQAIQCSSLIWTEKYRPKVPNEMIGNQSL
VTQLHNWLKNWNEQFHDTGNKGKGKKQNDSTAKKAVLLSGPPGIGKTTSAKLVSKMLGFQ
AIEVNASDNRGKADAKIFKGISGSNANCIKELISNESLGFEMDRSKHLKTVLIMDEVDGM
SAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLNQ
VAGAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDVRQRLQGSAKDEDI
SPFTAVDKLFGFSGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSIGKDDNGMKRMS
LIARAAESIADGDIINVQIRRYRQWQLSQTGSLSSCIIPAALLHGSRETLEQGERNFNRF
GGWLGKNSTAGKNLRLLEDLHVHLLASRESNMGRETLRLDYLTVLLKQLTDPLRVLPKDE
AVEKVVEFMNIYSISQDDMDTIVELSKFQGHGNPLDGIPSTVKAALTRAYKGESKSRMVR
AADLVTLPGKKKAPKKRVAAILEPSDDGLREENGDALAESEEENSSDTEDMEGTGNGEKL
QSELQSLNSKGIQVEVELKCGKESSKSKKTPTGRGKGGSASTEKKPAGRGRGGSGSSEKP
GAKRKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgagatattcgaaaatggtttatgaaggcacacgataaaggcaatgacaatgct
gagaagaaacctcctccaactgagccgaagaccgaaacacctgtgtgtggaggtcaagaa
ggttcaggaaggaggaaaacgagcaagtattttgtggcaaataaacagaagcaaaaagag
gataaagaagtagaggatcttcctgttaagagaaaagctcaaaatgatgatttccaatct
gtgaaacccccaccttctaaaaaggttcacaaatttgatgatgaagaagaagatgatgat
gacttttccttgcccaagaagaagaatgctgcttctcctagtaagaaattgaagagcagt
tcaggcaggggaattgctcagaaacctgtacatgttaacgaaagtgatgaagatgatgcg
aaggatactgaatctcctctgaaatctggtggcagaggtcgtggtggtaggggtgtatct
ggggcaccatctggtggaaggggcagaggtggtggacggggaggatttatgaactttggt
gagaggaaagatcctccacacaaaggagaaaaggaagtccctgaaggtgctcctaattgt
ttagctggtttaacttttgtgattagtggaacgcttgacagtttggaaagagaagaagca
gaagacttgattaaaaggcatggaggtcgtgttactggatctgtcagcaagaaaacgagt
tatcttttatgtgatgaggatattgagggacggaaatcttcaaaagccaaagaacttggc
acaccttttcttaccgaggatggactgtttgataagatccgctcctcaaagaattcaaaa
gccccggcacgagaagattcaaaggtgtctgtggagaaagtcgcatctctgccaaagaaa
agtcctcagaaagcagacttgaagagtaagtctttgatgtcaaatgcagcccacaaagat
ttgggtgcaggttcccagcaagcaaagcagaaagatcaagctatacaatgctcatcccta
atatggacagaaaaatataggccaaaggttccaaatgagatgataggaaatcagtcgctg
gttactcagctccataattggttgaagaactggaatgagcagttccatgacactggaaac
aagggaaagggaaagaaacaaaacgattctactgcaaaaaaagctgttctattgagtgga
ccacctggaatagggaaaacaacatcagcaaagctggtctctaaaatgctcggtttccag
gcaatcgaggtaaatgccagtgacaatcgtgggaaggcagatgccaagatttttaaagga
atcagtggaagcaatgcaaattgcataaaggaacttatcagcaatgaatccctgggtttt
gagatggataggtcaaagcatctgaaaacagttttgatcatggatgaggtagatggaatg
tctgctggagatagaggtggagttgctgatcttattgctagcataaagatttccaaaatt
cctatcatctgcatctgtaatgaccgttatagtcagaagctaaaaagtcttgtgaactat
tgcttgcttctcagtttccggaagcctacaaaacaacagatggcaaagaggttaaatcaa
gttgcaggtgcagaaggccttcaagttaatgagattgcacttgaggagcttgcagaaagg
gtgaatggagatatgcgcatggcattaaaccaattacaatatatgagcctctcaatgtca
gtcattaattatgatgatgtaagacagcgccttcaaggaagtgcaaaagatgaagatatt
tcaccattcactgctgtggataagctgtttggctttagtggaggaaagctgagaatggat
gagcggattgacctcagtatgagtgatcctgacttggtccctcttcttatccaggaaaac
tacattaactataggccaagttcaattggtaaagatgacaatgggatgaaacgtatgagc
ttgattgcacgtgctgctgagtctattgccgatggagatataataaatgtgcagattcga
agatatcgacagtggcagctctctcaaactggttctctgtcatcctgtatcattcctgct
gcattgttgcatggatcaagggagacacttgaacagggtgaacggaattttaatagattt
ggtgggtggctgggaaagaattctacagcgggcaaaaatttgaggcttttggaggatctg
catgttcatctccttgcttctcgtgaatctaatatggggagggagacgcttcgacttgac
taccttacagttcttctgaaacaactgacagatcctcttcgggtgctgcctaaggatgaa
gctgttgagaaggttgtggagttcatgaatatatactcaataagtcaggacgatatggat
accattgtggagttatcaaaatttcaggggcatgggaatccattggatggcataccatca
actgttaaagcagctctgacaagagcatataaaggagaaagcaaatcaaggatggtacga
gctgcagatttagtcacacttcctggaaagaaaaaggcccctaagaagcgtgttgcagcg
attttagaaccttctgatgatggtctaagagaggaaaatggtgacgcgttggctgaaagt
gaagaagaaaactcatctgacacagaggatatggaaggaactggtaatggcgagaagctg
cagtctgagcttcagagtttaaattcaaaaggaatccaagtagaggtggaactgaagtgc
gggaaggaaagttcaaagtctaagaagacgcctacaggaagaggaaaaggggggtctgca
tctaccgagaaaaaaccagcgggcagagggagaggcggttctggttcctcggagaaacct
ggagctaagagaaagagatga
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