Populus euphratica (Euphrates poplar): 105134725
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Entry
105134725 CDS
T05872
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105134725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105134725
03036 Chromosome and associated proteins [BR:
peu03036
]
105134725
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105134725
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105134725
PBAF complex
105134725
GBAF(ncBAF) complex
105134725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Fungal_KA1
Motif
Other DBs
NCBI-GeneID:
105134725
NCBI-ProteinID:
XP_011037542
UniProt:
A0AAJ6Y008
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MEEKPAGSFADSPASFEPTTSRRRAGGHKRKANSHSNSLSSPLPSKRLTREKAGFSNLSI
HNGPLTRARQIPNILASSAPSAGVKIEQKVVAAVPDAAAVVEEERRSRVEELQAEIEAEF
EVIRSRDSNAHVVPSHCGWFSWTQIHSLEERLLPSFFNGKSQSRSPDTYLDIRNWIMKKF
HANPNTLIEVKDLSELEVSDSEARQEVLEFLDYWGLINFHPLQLDSVTNADGDGAAKKDL
SLEKLFRFEAIQTCPPVVTKPNFTAPTTPSRLFPESAIAEELAKLEGPSVEYHCNSCSAD
CSRKRYHCQKKADYDLCADCFNNRKFGSNMSSSDFILMEPAEAAGVSGGKWTDQETLLLL
EALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDCAIDMDGTSKETADADATND
DTSAPKDVHDTSESKTGADEDQHLTVPMEGSKPEDTTGVKVSQGGDVINGQETSKSEYVS
GVKAGEEMGENVALKALTEAFEAVGYSPTPENRLSFSEVGNPVMALALFLARLVGPDVAT
ASACSALKSLSSNSPGMQLASRHCFLLEDPPDERKKPSCSDCVATEMADQDALKDKQEGK
SQKGNSPTSGIDNKDLSDDYSDKKVEDSVPEEKKPLDSSKGEFPDKVDVVNGGEIVVTHE
EVEPGRSKESSNSELPQDHTPSIVNKSDEIPPKSGCPPSSGKEPLEVPSAEEHSQLTEVA
KDVDMVSNLKPPEKNGRSQSFTSMSVDEPSQAVDVSKDVDMVSDSLPADNNGSQQPVKSN
ATGEQSQTTEATADVDMLSSQPSEVNEPSDPKVETGATADEVPKDSKKEKPDSEVIKDDN
NIDKLKRAAVSAISAAAVKAKLLANQEEDQIRELAASLIEKQLHKLEAKLAFFNEMDSVI
MRVREQLDRSRQRLYQERAQIIAARLGLPPSSRAMPQALPSNRNAMNFANAFPRPPMNMA
TQRPPISTPPMNMATQRPPISTPMGTLANTPPGTFVSTTTTAGNSIRPSSQDKISSIGTK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaaccggcggggagctttgccgactcgccggcgtcatttgaaccgacaact
tcaaggcgccgggctggagggcacaaaaggaaagcaaattcacattcaaactctctctct
tcacctctaccatcgaaacggctcactcgcgagaaagctggattttctaatctctcgatc
cataacggtccgttgactagagcgagacaaatccctaacatcttggcttcttcggcgcct
tcagcaggcgtgaagatcgaacagaaggtagttgcggcggtgccggatgccgctgcggtg
gtggaggaggagaggaggagtagggtggaggaattgcaagcagaaattgaagcagagttt
gaggttattagatctcgtgattctaatgctcatgttgtgcctagtcattgtggttggttt
tcatggacacaaattcactcgcttgaggagcgtttgctgccttcattctttaatggaaag
tcccaaagccggtcacctgacacctatttagatatacgtaattggattatgaagaagttt
catgcaaatccaaacactcttattgaagtgaaagatttatcagaacttgaagtttcagac
tcggaagcgaggcaagaggtgttagagttcttggactattggggattaattaactttcat
ccattacaattagattctgttacaaacgctgatggtgatggagcagcaaagaaagatttg
tcacttgaaaagttgtttcgctttgaagccattcaaacatgtccacctgttgttactaaa
cctaacttcacagctccaactacaccatctagattgtttcctgagtcggcaattgctgaa
gagttggctaagcttgaggggccatctgttgagtaccactgcaattcttgttcagctgat
tgctcgcgcaaacgctatcattgccagaagaaggcagattatgatttatgtgccgattgc
tttaataatagaaagtttggctcaaacatgtcctcatcagattttattctcatggagcct
gctgaggctgctggtgtaagtggtggaaagtggacagatcaagagactctacttcttctt
gaagcattggaactctataaagaaaactggaatgagattgcagaacatgttgccacaaaa
acgaaggctcagtgtatattgcactttgttcaaatgccaattgaggatgccttttttgac
tgcgccattgatatggatggtacttctaaagaaacagcagatgctgatgcaacaaatgat
gatacatctgcccctaaagatgtccatgatacaagtgagagcaaaacaggtgctgatgag
gatcaacacttgactgtgccaatggaaggttcaaaaccagaagatacgactggagtaaaa
gtttctcagggaggtgatgtgattaatggtcaggaaacttcaaaatctgaatatgtcagt
ggagtgaaagctggtgaggaaatgggtgaaaatgttgcactcaaggctcttacagaagca
tttgaagctgttggctattccccaactcctgaaaaccgactttcattttctgaagttgga
aatcctgtcatggctttggctttgtttctggcaagattggtgggacctgatgttgctact
gcttcagcctgcagtgctttgaaatccttgtctagcaattctcctggcatgcagctggca
tcaaggcattgctttctcctggaagatccaccagatgagagaaagaaaccatcttgcagt
gattgtgttgctactgaaatggctgatcaggatgctctaaaggacaagcaggagggaaaa
agccagaaagggaatagccctacctcaggtatagacaacaaagatttgtcagatgattac
agtgacaagaaagttgaagactccgttcctgaagagaagaaacctctggattcttcaaaa
ggtgaattcccagataaagtagatgttgtaaacggaggagagatagtggttactcatgag
gaagttgaacctggtagatcaaaggaatctagcaattcagagctacctcaggaccacaca
ccaagtattgtaaacaaatcagatgagataccacccaagtcagggtgtccaccaagctcc
gggaaggaaccactggaagtaccttcagctgaagagcattctcagcttacagaggtggct
aaggatgtggatatggtgtctaatttgaagcccccagaaaagaatgggcgttctcaatca
tttacatcaatgtcagttgatgaaccctctcaagctgttgatgtgtcaaaggatgtggac
atggtgtctgattctctgcctgcggacaacaatgggtcgcagcaaccagtgaagtcaaat
gcaacaggagagcagtctcaaactacagaggcaacagctgatgtagacatgttatcttca
cagccttcagaagtgaacgagccctcggatccaaaggttgaaactggagccaccgcagat
gaggttccaaaagacagcaagaaagagaagcctgatagtgaagtgattaaagatgacaat
aacattgataaactgaagcgtgctgcagtttcagctatctcagcagcagcagtgaaggca
aaacttcttgcaaaccaggaagaggaccaaattcgggaacttgctgcctcactgattgag
aagcagctacataagttggaagccaagctggctttctttaatgaaatggatagtgttata
atgagggtgagggagcaactggacaggtcaaggcagagactttaccaagaacgagctcag
ataattgcagcccgacttggtttaccaccttcatctagagcaatgccacaagcattacct
tccaacagaaatgcaatgaactttgcaaacgcatttccgagaccaccaatgaacatggct
acccaaaggccaccaatttcaacgccaccaatgaacatggctacccaaaggccaccaatt
tcaacgccgatgggtacattggctaatacccctcctggaacatttgtgtcaacaaccact
acagcaggaaattcaattcggccttctagtcaggacaaaatttcttcaattggaacaaag
tag
DBGET
integrated database retrieval system
