Populus euphratica (Euphrates poplar): 105135057
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Entry
105135057 CDS
T05872
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105135057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105135057
03036 Chromosome and associated proteins [BR:
peu03036
]
105135057
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105135057
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105135057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
105135057
NCBI-ProteinID:
XP_011038039
UniProt:
A0AAJ6Y0M7
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MFGASNPFGQSSNSPFGTTQPVFGQASNVSSSPFALKPFGSPTTPFGAQTGSSIFGGTST
GMFGAPQTSSFSATNAFGSSTPAFGASTTPAFGSSSSSAFGAGSSVFGQKPFGGFGSTTQ
TSPFGNTNQQPQPGFGSTTQTSPFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASTP
AFGTTTAPAFGATSTTPAFGSTSTTSAFGAPSTTPAFGAPSTTPAFGSTATPGFGSTGAS
FTSAPLFGAGGAFGASTSVFGSSATTPAFGSLTGSGFGTPTTSAFGAATTSAFGATSSPS
FMFSSSPGFGQSTSTFGSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGFAQPGFGGHRPG
TRAAPYAETAEAEGGAQAGKLVSISAMPAYKDKSHEELRWEDYQLGDKGGPLPPGQSPGG
AGYSMSTPQANPFAPSTGLGQTSTNMFSSTATNLFAPKTQTSTPSFTTASPFGPSTSSNL
FQPSTPAFSVGSSPSLFGSTSMPNFSTTPSLFSSTTGQGNASPFGSNMFNNTQSSLSFPS
TTPSMGQTTAFPQSNPFGPSTTSSLFSSPATGGLFSSTQSQITPNLGGFNQMTPSQPAQN
AGIFALNFSQTQAAGNSGYAGVSSNFGQPFTTQNAVAVQPVPITNPFGTLPAMPQVSFGR
AGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKYYPKHDGPKVPFFSD
EEETPSTPKADALFIPRENPRALVIRPMDQWPSREIAEKASPLNASAPVHENGEFSVSED
ASPSNDSAAGDKNKNSAENGVIKEQVKVNQKPNGVHEDHATLREESYMTLSGHRAGEAAI
VYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHVKDFVVGRHGYGSIKFLV
ETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCIDKKSGRQFTE
GPKIERYKEMLKRKAEDQGAEFVSYDPVKGEWKFKVNHFSKYMLEDEEEEEWDVQATCNK
VDDCLVLKA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgctagcaatccttttgggcagtcttctaatagcccgtttgggacaacacag
ccggtttttggtcaggctagtaatgtaagtagtagtccttttgctctgaaaccctttggt
agtccaacaaccccttttggtgcacaaacagggagttccatatttgggggcacttctact
ggtatgtttggtgcaccccaaacttcttcattctctgcgacaaatgcttttggtagctca
acacccgcttttggagcatctactacccctgcatttggtagttcgtcatcatcagcattt
ggtgcaggttcttctgtttttggtcagaagccctttggaggctttgggtctaccactcaa
acaagtccatttggaaacacaaatcaacagccacagccaggctttgggtctaccactcaa
acaagtccgtttggaaacacaaatcagcagccacagccagggtttggaaacaatagttta
tttggttcaacaccttttggtgctccatctcagtctgcatttggtgctgctagtacccca
gcctttggtacgacaactgccccagcctttggtgccacaagcaccacgccagcctttggt
tccacaagcaccacttcagcctttggcgccccaagcaccaccccagcatttggcgcccca
agcaccactccagcctttggctcaacagcaactccaggttttggtagcacaggagcttca
tttaccagtgcgccactgtttggagctggtggagcttttggagcttccacttcagttttt
ggatcttcagctactacacctgcttttgggagtttgactggttctggctttggcactcca
accacttctgcctttggggctgcaactacttctgcctttggggctacatcttccccatcc
tttatgttttcatcaagtccaggttttggccaatcaacttctacttttgggagcagccca
tttggaagtactacatctacttttcctgcccagccttctccttttggagctcagcctaca
acatcagcatttggaaacactggctttgcccagccagggtttggggggcaccgtcctgga
actagagcagcaccttatgcagaaactgctgaggcggaaggtggtgcacaggctggaaaa
ttagtgtcaatatcagccatgcctgcctacaaagataaaagccatgaagagctaaggtgg
gaggactatcaattgggggacaaaggtggaccgcttcctcctggtcaatcccctggtggg
gctggatatagcatgtctaccccacaggcgaatccttttgctccttcaactggacttggt
caaacatctacaaatatgttttcttcaacagccacaaacctgtttgctccaaaaactcaa
acatctacaccttcattcaccactgcctccccttttggcccttcaacgtcatccaacctc
tttcagccatcaacacctgctttctcagttggttcatctccatctctttttggatcaaca
agcatgcctaattttagtacaacaccatccttgtttagttctactacaggccaaggaaat
gcttcaccatttggttccaatatgtttaataacactcaatcatctctctcattcccatct
accacaccttcaatggggcagacgactgcatttccacagtccaatccatttggaccaagt
accaccagttccttgttcagtagccctgctactggcggccttttctcaagcactcaatct
cagataaccccaaaccttggggggtttaatcaaatgactccatctcaaccagctcagaat
gcaggtatttttgccttgaacttcagtcagacacaagcagctggtaacagtggctatgct
ggtgtatcaagtaattttggacaaccgtttacgacacaaaatgctgttgctgtacaacca
gtgcccattacaaatccatttggaacacttcctgcaatgcctcaagtgtcctttggtcga
gctggaactacaccttcagttcaatatggaatctctaccatgcctgttgttgagaaaccc
tctcccattagaatatcatctttattgacttctaggcacttgtcacaaaggaggatcagg
ttgcccatgaggaaatattatcctaagcatgatggaccaaaggttccatttttcagtgat
gaagaagaaacacccagcacaccgaaggcagatgctcttttcattccaagggaaaaccca
agagctctagtcattcgtcctatggaccagtggccttcaagggaaattgcagagaaagca
tctccattgaatgcatcagcacctgtacatgagaacggagaattttcagtatcagaagat
gcttctccctcaaatgattccgctgctggtgataaaaataaaaattcagctgagaatggt
gtaatcaaggagcaagttaaagtcaaccagaaacctaatggagtccatgaggatcatgcg
actctgagagaggagtcctacatgacacttagtggtcacagagctggtgaagctgcaatt
gtgtatgagcatggagcggatattgaggcactaatgccaaaactccgacgttctgactat
ttcaccgagcctcgtatccaggaactggcggccaaggaaagggctaggccgggattctgc
cgacatgttaaggattttgtggttggaaggcatggctatggaagcatcaagttcctggtt
gaaacagatgttcgaaggcttgatcttgagtcccttgttcagtttaataaccgcgaagtt
atcgtgtacatggatgatagcaagaaaccacctgtcggacagggtctcaacaagcctgct
gaggtaacacttctcaacataaaatgcatagataaaaagagtggacgccagttcacagaa
ggaccaaagatcgagagatacaaggagatgctcaaaagaaaagctgaagaccaaggcgcc
gaatttgtttcttatgaccctgttaaaggagagtggaagttcaaggtcaaccatttcagc
aagtacatgctggaggatgaagaggaggaggaatgggatgtgcaagctacctgtaataaa
gtcgatgactgcttggtactgaaggcgtga
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