Populus euphratica (Euphrates poplar): 105135339
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Entry
105135339 CDS
T05872
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peu03000
]
105135339
03036 Chromosome and associated proteins [BR:
peu03036
]
105135339
Transcription factors [BR:
peu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105135339
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105135339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
105135339
NCBI-ProteinID:
XP_011038465
UniProt:
A0AAJ6V0R6
LinkDB
All DBs
Position
Unknown
AA seq
1517 aa
AA seq
DB search
MEDKHEEVEDIESGLSDSFIDDDDSDNDDDNEPSTSGQDDGTRIQEPLTDQEVEELVAEF
LEVESKAAEAQEALEKESLAKVESDVREELAQSLQGDDLEAAVEDEMATFREEWENVLDE
LETESYHLLEQLDGTGIELPSLYKWIESQAPNSCCTEAWKSRAHWVGTQVTKETTDTVAD
AEKYLQIHRPVRRRHGKLLEEGASGFLQKKLAMDGSEAIAENGEVDWASMKKLFSTSSSE
DVASFGSKHWASVYLANTPQEAALMGLKFPGVNEVEEIEDIDGNSTDPFVAEAIANEKEL
VLSEEQRKNYRKVKEEDDAKIDQKLQLRLKQRRCLKRCKQGVSSVVQEMGTNMAESVPLD
DNYHEVKDLKKDVCENSGDLDMEQLMSESNSVFPESDASEPRSSKRSNESEDLNINNKKI
RTVIIDSDNEADILEDKSVQGIKIEDQSTLLENIGDPSAGCNPSQGSSEKFQCTACDKVA
VEVHSHPLLKVIVCKDCKFLMEEKMHVKDPDCSECYCGWCGRNNDLVSCKSCRTLFCTAC
IKRNIGEEYLYKDAVSGWQCCCCSPSLLQRLTSQLEKAMGSGDIMVSSSDSDSDSSDTND
DVTISSKRKKKKKIRRIIDDAELGEETKRKIAIEKERQERLKSLKVKFSDKSKMMKFASC
SGNLPEGASVEVIGDATTGYIVNVAREKGEEAVRIPPSLSSKLKAHQVAGIRFLWENIIQ
SIRKVKSGDNGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRK
EFMKWTPSEVKPLRVFMLEDVSRERRVELLAKWRAKGGVFLIGYSAFRNLSLGKNVKERN
MAREMCNALQDGPDILVCDEAHIIKNTRAETTQALKLVKCQRRIALTGSPLQNNLMEYYC
MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTVDDVKIMNQRSHILYEQLKGFVQRMDM
SVVKKDLPPKTVFVVAVKLSPLQRKLYKRFLDVHGFTNGRVSNEKMRKSFFAGYQALAQI
WNHPGILQLRKGREYVGNVENFLADDCSSDENVDYNTIVEEKSRNPNDFIQGKSDDGFFQ
KDWWNDLLLENNYKEVDYSGKMVLLLDILVMSSDVGDKTLVFTQSIPTLDLIELYLSRLP
RVGKKGKFWRKGKDWYRLDGRTESSERQRLVERFNDPENKRVKCTLISTRAGSLGINLYA
ANRVVIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR
VVDRQQVYRTISREEMLHLFEFGDDENSDTLIDIGQEYRQADTRNISCQTANSLKKNASR
SHGSCASGKVMESLLGKHRQRWIFDYHEHETLLQENEEEKLTKEEQDMAWEVYKRSLEWE
EVHRVSLDDSTFERKPPMSNGASSAPDASSIPVPSMARPASEASNGAPSESILRSRMVQR
KCTNLSHLLTLRSQGTKAGCTTICGECAQEISWEDLKREGKAARNCYGSCYRQECNSTNP
FKIWRYMFLCVLFKCAT
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaacacgaggaagttgaggacattgagagtggtttaagtgattcatttatt
gacgacgacgattctgataatgatgatgataatgagccttctacatctggacaagatgat
gggacccgtattcaggaacctttgaccgaccaagaagtagaggagttggttgctgagttc
ctggaagttgagagtaaggctgcagaggctcaagaagcactggaaaaggagtctcttgca
aaagtagagagtgatgtgagggaggagttggcacaaagtctccagggtgatgatctggag
gcagctgttgaagatgagatggctactttcagggaagaatgggaaaatgtgctcgatgag
cttgagactgagagttatcatttgttggaacaacttgatgggactggtattgagctgcca
agcctttataagtggattgagagccaggctccaaacagttgctgcactgaagcttggaaa
agcagggcacactgggtgggaactcaggtgaccaaggaaacgactgatacagtagctgat
gctgagaaatatcttcaaatccataggcctgttagacgacgacatggtaaattattggag
gagggagcaagtggatttctgcagaaaaaacttgcaatggatggaagtgaggctattgca
gaaaatggagaagtagattgggcctctatgaagaaactattctcaactagcagttctgag
gatgttgcttcatttggcagcaagcattgggcttctgtttaccttgccaacactcctcag
gaagctgcacttatgggacttaaatttcctggagtcaatgaggttgaggagattgaagac
attgatgggaattccactgatccatttgttgcagaggccatagcaaatgaaaaggaatta
gttctttctgaggaacagagaaaaaattacagaaaggtcaaagaggaagatgatgcaaaa
attgatcaaaaacttcaacttcgtttgaaacaaaggagatgtcttaagagatgtaaacag
ggtgtcagctcagtcgtccaggaaatgggaacaaacatggctgagtcagtgcctctggat
gacaattatcatgaggtcaaggatttgaagaaagacgtgtgtgaaaattctggagacctt
gacatggaacagttgatgagtgagagcaattcagttttcccagaatctgatgcctctgaa
cccagaagttccaagcgttcaaatgagagtgaggacctaaacatcaataataagaagatt
cgaactgttatcatagacagtgacaatgaagcagacattttggaggataaatcagtacaa
ggcattaaaattgaggatcaatcaactttgctagaaaacattggggacccttctgctggc
tgcaatccttcacagggttcaagtgagaagtttcagtgcactgcctgtgataaagttgct
gttgaagtgcactcacatccacttttgaaagtaattgtttgcaaagattgtaaattctta
atggaggaaaaaatgcatgtgaaggatcctgactgttctgagtgttactgtggatggtgt
ggaagaaacaatgacttggtgagttgtaagtcatgcagaacattattctgcactgcttgt
ataaaaaggaacatcggtgaagagtacttgtataaggatgcagtttctggttggcaatgt
tgttgttgctctccaagtctgctacaaagacttacatcacaattagagaaagccatgggg
tctggagatataatggtttcaagttctgatagtgattcagactcttcagatacaaatgat
gatgttacaatcagctctaagagaaagaagaaaaagaagattagaagaatcattgatgat
gctgaattaggagaagagaccaagagaaaaattgctattgaaaaggaacgtcaagaacgc
ttgaaatccctgaaagtcaagttttctgacaaatccaagatgatgaagtttgcaagctgt
agcggaaacttacctgaaggtgctagtgttgaagtgattggtgatgccacaactggttat
attgtgaatgttgcgagggaaaaaggtgaagaagctgtgaggattcctccaagcttatca
tctaaattgaaagcccatcaggtggcagggataagatttctatgggaaaatattatacag
tcaattagaaaagtgaagtctggggataatggtcttggttgtattttagcgcatacaatg
ggccttggtaaaacttttcaggtcatagcttttctgtacactgccatgagaagtgttgat
ctgggtttaagaacagcactcattgtgactcctgtgaatgtgctgcataactggcgcaag
gagttcatgaagtggacaccttcagaagtaaagccactccgtgttttcatgctggaggat
gtgtcgagggagagaagagtggaattgcttgcaaagtggagagctaaaggtggtgttttc
ttgataggctactctgcctttcggaacttatctcttggaaagaatgtgaaggaacgaaat
atggctagagaaatgtgtaatgccttgcaggatggacctgatatacttgtttgtgatgaa
gcccatatcatcaagaacaccagagctgaaacaacccaggcactgaaactggttaaatgc
cagagaaggatagcattaactggatcacctcttcagaacaatctaatggagtattattgt
atggttgattttgtaagagaaggttttcttggcagcagccacgagtttcggaaccgcttc
caaaatcctatagaaaatggacaacatactaattcaacggttgatgatgtaaagataatg
aaccaaagatctcatattctctatgaacaattgaaagggtttgttcaaagaatggacatg
agtgtggtgaagaaagacctgccacctaaaactgtatttgtagtggctgtaaagctctcg
ccattacagaggaaattgtacaagagattccttgatgtgcatgggttcacaaatggcagg
gtttcgaatgaaaagatgaggaagagcttttttgctggttaccaggcattggctcagata
tggaaccatcctggaattttgcaattgaggaaagggagagaatatgttggcaatgttgaa
aactttcttgcagatgactgctctagtgatgaaaatgtggactacaatacaattgtcgaa
gagaagtcaaggaatccaaatgattttattcaagggaaaagtgatgatggattctttcaa
aaggattggtggaatgatcttctacttgaaaataattataaagaggttgattacagcggc
aaaatggtattgctgcttgacattttagtcatgtcttctgatgtgggtgataagacgttg
gtttttacccagagcatacccactttagatctgatagagctttatctttcaagattacct
cgagttggaaaaaagggaaagttttggagaaaaggaaaagactggtataggctagatgga
agaacagagagctctgaaaggcaaaggttggttgagaggttcaatgatcccgagaataag
cgggtcaaatgtactttgatttctactagggctggttctcttgggattaatctctatgct
gctaaccgggtggttattgttgatggctcttggaatccaacgtatgatcttcaggccata
tatcgggcttggaggtatggccagactaagccagtgtttgcttacagattaatggcacat
ggaaccatggaagaaaaaatctataagcgtcaggtcacaaaggaaggacttgctgcaagg
gtggttgatagacaacaagtatataggactatctccagagaagaaatgttgcatcttttt
gaatttggtgatgatgagaactcagacacactgattgacattggccaagagtatagacag
gcagataccaggaatatttcttgccaaaccgcaaattctttgaaaaagaatgcgtctcgt
tctcatggaagctgtgcttctggtaaggtgatggaaagcttgcttggcaagcaccgtcag
aggtggatttttgattaccatgaacatgagactcttttgcaagagaatgaagaggaaaaa
ctaacaaaggaggagcaagacatggcttgggaagtatataagagatcattagaatgggaa
gaagtgcatcgagtttcccttgatgattccacttttgagcgaaagccacccatgtcaaat
ggggcatcttctgccccagatgcaagcagcatacctgtgccaagcatggcccgtcctgca
tctgaggcttccaatggagcaccttccgagagcattttaaggagtcgtatggtgcagcgg
aaatgtactaatctctctcatttgctgacccttagaagtcagggaacgaaagctgggtgc
actactatatgtggggaatgtgcccaggagataagctgggaagatctgaaacgggagggt
aaggcagcacgtaattgttatggaagctgttatcgtcaagaatgtaattccactaatcct
ttcaagatatggagatacatgttcctttgtgttcttttcaaatgcgcaacttag
DBGET
integrated database retrieval system
