Populus euphratica (Euphrates poplar): 105135898
Help
Entry
105135898 CDS
T05872
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105135898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105135898
Membrane trafficking [BR:
peu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105135898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
TPR_VPS8_2
Beta-prop_EML_2
WD40
Beta-prop_EML
ANAPC4_WD40
WDR55
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
zf_RING_Vps8
MinC_N
zf-RING_Vps41
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105135898
NCBI-ProteinID:
XP_011039285
UniProt:
A0AAJ6V0F6
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MTKKLTSTKLPMELDLDSFLNSHSTSDSDTDNTSVPHRTLDEILNDSDSSSPPSSPPSIK
QSDLPPSHLQHAVSLDSSTQSQILQDQLKPTSLTRITNSPWRLPPPSSRQLPSLFGGVRS
NAKPGAALAAAAAASRSVPTPHAAAIKSRRLSSGSGTFQTILDIAESASSGGGDHETVSN
SSNGDAIERFQSQSEEKMGGLFQSATEENAIPNTEEDLKISRESEGEPVFQIEGEVRLSD
DSGQDMLHNTGSTSNSDANLNLDDENAASVSKDKFVEVSDSSEVVIINLNNVDSFKDEAV
KGEGNSLEENMDEVKDDGVGVFTIGDGDDASSMSDISELVEERIEQLESEMISKRAEKKR
KSSLKPLELAEELEKKMAYTGLHWEEGAAAQPMRLEGVRRGSTTLGYFDVDSHNVITQTV
GSQTFRRDHGSPQVLAVHLNYIAVGMSKGVIVVVPSRYSSHNDDNMDAKMLMLGLQGDRS
HAPVTSMCFNQQGDMLLAGYGDGHITVWDVQRASAAKVINGEHTAPVVHAFFLGQDSQVT
RQFKAVTGDSKGLVLLHAFSVVPLLNRFSFKTQCLLDGQRTGTVLSASPLLDESCGGALP
ATQGNSSASSTSISSMMGGVVGGDAGWKLFNEGSSLVEEGVVIFVTHQTALVVRLSPSLQ
VYAQLSRPDGVREGSMPYTAWKCTTQPHSSSPDNVPEHVAERVSLLAIAWDRKVQVAKLV
KSELKVYGKWSLDSAAIGVAWLDDHMLVVLTLTGQLYLFAKDGTVIHQTSFAVDGPGGDD
LAAYHTHLINIYGNPEKAYHNCIGVRGASVYILGPTHLIVSRLLPWKERIQVLRRAGDWM
GALNMAMTLYDGQAHGVVDLPKSVDAVKEAIMPYLVELLMSYVDEVFSYISVAFCNQIGK
AEQQDDSKTGSNSVHSEIKEQFTRVGGVAVEFCVHIQRTDILFDEIFSKFVFVQHRDTFL
ELLEPYILRDMLGSLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCREH
GLYGALVYLFNKGLDDFRTPLEELLVVSRTSQQETAAALGYRMLVYLKYCFLGLAFPPGH
GALPVTRLSSLRTELVQFLLESSDASNPQAVSRGTYLNLYHLLQLDTEATLDVLRCAFLD
GENLKRELSMQDGADTSMEAEQENNIMAESQNLWIQNTINALVQITEKHISRADESAVDN
VDTRFVDAWPSKKDLGNLFEFIAYHVACRKAHVSKVVLGQILEYLTSESTVPPSVPAHII
ETSKEREKQVLALLEVVPETDWNESYVLQLCEKAHFHQVCGLIHTIRHQYLAALDSYMKD
IDEPIHTFAYINNMLEKLSDNDSGAFRSAVISRIPELLVLSREGTFFLVTDHFRADSPHI
LSELRSHPQSLFLYLKTVIEVHLSGTLDFSNLKKADDIDVADGRRVKDQSKGLTAYLERI
SDFPKFMRNNPVHVNDDMIELYFELLCQFERNSVLRFLGTFDSYRVEHCLRKCQEYGIID
AAAFLLERVGDAGSALLLTLSGLNENFSELESAVESVVSDMSVSASSDHYSTVLKMKEVD
NIRSILNACIGLCQRNTPRLQPEESEMLWFRLLDSFCMPLMDSYSDRRASKTKNYGGVQG
EVLGSQEDDGAWVIKWKISRSCKGAHFLRKLFSMFIKEIVEGMIGYIRLPTIMSKLLSDN
GSQEFGDFKITILGMLGTYGFERRILDTAKSLIEDDTFYTMSLLKKGASHGYAPRSTVCC
ICNCPLAKNSSFRIRVFSCGHATHLDCELENELSSRGHLSGCPVCMPKKNTQRGARNKSA
LPENGLVNKVSARPRRAHGTSILHPHEDLLENSYGLQQISRFEILSSLQKDKKLVQIESM
PQLRLAPPAVYHEKVKKGPDLLTGESSSALAEVEKPGKRRQLRELKLKGSSLRFPLKSSI
FGKEKTNKG
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaactaacgagtaccaaactccctatggaactcgaccttgactccttcctt
aattctcattccacctccgattctgacaccgataatacctccgtccctcaccgtactctc
gacgaaattctcaacgactccgattcctcttcccctccttcatccccaccctccatcaaa
caatcagatctccctccctcccacctccaacacgccgtctcactagattcctccacacaa
tcacaaattctccaggatcaattaaaacccacttcacttactcgaattactaattcaccg
tggcgccttcctcctccgtcttcaagacagttgccatcgcttttcggtggagtgagatcg
aatgcgaagccaggggcagcccttgcagcggcagctgctgcctctcgttctgttccgaca
ccgcatgccgccgcgatcaagtccaggagattgagcagcgggagcggaaccttccagacg
attctcgatatagcagaatcagcctccagtggtggtggcgatcatgaaactgtgtcaaat
tcatcgaacggagacgcaattgaaagattccagtcccagtcagaggagaagatgggtgga
ttatttcaatctgctacagaagagaatgcgattccgaatacagaagaggatttgaagatt
tcacgtgaaagtgaaggagagccagtttttcaaatcgagggggaagtacggctaagtgat
gatagtggtcaagatatgttgcataatactggttcgacctcgaattctgatgctaactta
aatttggatgatgaaaatgcagcttctgtttctaaagataaatttgtggaagtgagtgat
tcgagtgaagtagttattattaacttgaataatgttgattcctttaaagacgaggcggtg
aaaggagagggaaatagtttggaagaaaatatggacgaggttaaagatgatggggtaggt
gtttttactattggtgatggtgatgatgcaagttcaatgagtgatatttcggagcttgta
gaggagagaatcgagcaactggagagtgagatgattagtaaaagggcggagaagaaacgg
aagtctagtctgaagccgcttgaattggcagaagaactcgagaagaaaatggcctatact
ggattgcattgggaggagggtgcggctgctcagcctatgagacttgagggtgttcggagg
gggtcaactactttaggatattttgatgttgattctcataatgttattacacaaactgtt
ggttctcaaacatttaggagagatcatggttcacctcaagttttggctgttcatcttaac
tacattgcagtgggaatgtcaaaaggtgtcattgttgttgtccctagtagatactcttct
cataatgatgataacatggatgcaaagatgctaatgcttggtttgcaaggtgatcgatct
catgccccagtgacttccatgtgctttaatcaacaaggagacatgctcttggctggttac
ggagatggtcacattactgtttgggatgtccagagggcatcagcagcaaaagttattaat
ggggagcatactgcaccagttgtgcatgcattctttctgggccaggattctcaagttact
cgtcagtttaaagcggttactggtgatagcaagggtctggttctgctacatgctttctca
gtggttcccttgcttaacaggttctcgttcaaaacacagtgtcttcttgatggacaaaga
acgggcactgtgttatcagcttcaccccttcttgatgaatcttgtggaggtgctttgcca
gccacacagggaaattcttcagcatcatccaccagcattagtagcatgatgggtggtgta
gttgggggagatgcaggttggaaactattcaatgagggctcttctttggttgaagaaggt
gtggtcatatttgtcactcatcaaactgccttggtggttaggctcagtcccagtttacag
gtatatgcacaactttctaggccagatggagttcgagagggttccatgccttacactgca
tggaaatgtaccacacaaccacatagttcatcacctgacaatgttccagaacatgtggca
gagagagtctcattgctcgcaattgcctgggatcgaaaagtgcaagtggcaaaattggtc
aaatctgagttaaaagtttatggaaaatggtcccttgacagtgcagccataggtgtggct
tggttggatgatcatatgctggtggttctcacgttaacaggacaactatatttgttcgcg
aaggatggcactgtgattcaccaaactagttttgctgttgatggtcctgggggagatgat
ctagctgcatatcatacacacttgatcaatatctatgggaaccctgagaaagcttatcac
aattgtataggtgtaaggggagcttctgtgtacatacttggaccaacacatcttattgtt
tcccgccttctcccgtggaaagagcgtattcaggttctgcgaagagcaggggactggatg
ggtgccctgaacatggcaatgacactttatgatggccaagctcatggtgttgttgacctt
cctaaatcagtagatgctgtaaaggaagccataatgccatatctggtagaattgcttatg
tcatatgtagatgaagtattttcttatatctcagtggctttttgcaatcaaattggaaaa
gcggaacagcaagatgactcaaagactggaagcaactcagtgcactctgaaataaaagaa
cagttcacacgtgtcggtggtgttgctgtagaattctgtgtccatatacagcggactgac
atcctttttgatgaaattttctctaaatttgtctttgttcaacatagagatacatttttg
gagcttttggagccatatatattgagggatatgctggggtctctaccccctgagattatg
caagccctagtagagcattacagtagcaaagggtggttgcagcgagttgagcaatgtgtc
cttcacatggacatttcctccttggattttaatcaggttgtcaggctatgccgggagcat
gggttatatggtgccttggtgtatcttttcaataaaggattggatgatttcaggacacct
ttagaggagctattggttgtttcaagaactagtcaacaagagactgctgctgcccttggg
tacaggatgcttgtttatctgaagtactgctttttaggtcttgcctttccaccaggacat
ggggctcttcctgtcacacgtctgtcatctcttaggaccgaacttgtgcagtttttgctg
gagagttccgatgcctctaatccacaggcagtgtcaagaggaacatacctgaacttgtat
catctcttgcagttagatactgaagcaactttagatgttttgaggtgtgcttttttagat
ggtgaaaatctgaaacgtgagttatctatgcaagatggtgctgacacaagtatggaggct
gagcaagaaaacaatattatggctgaaagtcagaatttatggattcagaatactataaat
gctcttgttcaaattaccgaaaaacatatatcccgagcagatgagtctgctgttgataat
gttgatactcgatttgtggatgcatggccctcaaagaaagacttaggaaatctgtttgaa
ttcattgcataccatgttgcatgtaggaaagctcatgtttcaaaagttgtgctgggtcaa
attttggagtacttgacatcagaaagtactgtcccaccaagtgttcctgcacacatcatt
gaaacctcaaaggagagagagaaacaggtgcttgcacttctggaagtggtgcctgagact
gattggaatgagtcttatgtgttacagctatgtgagaaagcacactttcaccaggtttgt
ggcttaattcataccatcaggcatcagtatcttgctgccttggatagctatatgaaagac
atagatgaacccattcatacttttgcgtacattaacaatatgttagaaaagctgagtgac
aatgatagtggtgcttttcgatcagctgtgatttctaggattcctgagttgcttgtctta
agcagagagggaacattcttcttggtcactgaccattttcgtgctgacagtccacatatc
ctctctgaattacgctctcatccacagagtctttttctgtatttaaagactgtcatcgag
gttcatttgtctggaaccttagacttttctaatttaaaaaaagctgatgatatagatgtt
gctgatggaagaagggtgaaagatcagtcaaaaggactcacagcttatctggaaaggatc
tctgattttcctaagttcatgcggaataatcctgttcatgtgaatgatgatatgattgag
ctttattttgagctattatgtcagtttgagcgcaattcagttctcagattcttagggact
tttgatagctatcgggtggaacattgtttacgcaagtgccaggaatatgggataatagat
gctgctgcctttttgttggaaagggttggtgatgctggaagtgctcttttactcacactt
tctggtctcaatgaaaatttttcagagctagagtcagctgtggaaagtgtggtttcagat
atgagtgtttctgcgagtagtgatcattacagcaccgttttaaaaatgaaagaggtggac
aacatacgcagtatattaaatgcctgtattggattatgccagcggaacacccctcgttta
caacctgaggaatctgagatgctctggttcagattacttgactcgttctgtatgcctttg
atggattcctattctgatagaagggcatcaaaaacaaagaattacggtggagtgcaaggt
gaagttctgggctcccaagaggatgatggggcatgggtaatcaagtggaaaatctccaga
tcttgcaaaggtgctcacttcttgaggaaattgttttctatgttcatcaaagagattgtc
gaggggatgattggatacattcgccttccaactatcatgtcaaaactcctctctgataat
ggtagccaggaatttggtgatttcaaaattacaattctggggatgcttggaacatatggc
tttgaaagaagaattctggatactgccaaatccttgatagaggatgacacattttacacc
atgagcttgctaaagaagggggcgtctcatggctatgctccccgaagtactgtatgttgt
atatgcaactgcccacttgcaaagaattccagtttccgtattcgagttttcagttgtggt
catgcaactcatcttgattgcgaacttgaaaatgagttatcaagtaggggccacttatcc
ggatgtcctgtttgcatgcctaagaagaatactcagaggggggctagaaacaaatcagca
cttcctgagaatggtttagtgaataaggtttccgcgagaccacggagagcacatggaact
agcattttacacccacatgaagatttgttagagaattcctatgggcttcagcaaatatca
cggtttgagatcttatctagtctccaaaaagataagaaattagtacagatagaaagcatg
cctcagctgaggctagcaccacctgcagtttatcatgaaaaggtgaagaaaggacctgat
cttttaacaggagagagtagcagtgctcttgcagaagtcgagaaaccaggcaaaaggagg
caactcagagagctaaaactgaaagggtcatctctccggttcccactaaaatcaagcata
ttcggcaaggagaagacaaacaaaggctga
DBGET
integrated database retrieval system
