Populus euphratica (Euphrates poplar): 105136014
Help
Entry
105136014 CDS
T05872
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105136014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peu03000
]
105136014
Transcription factors [BR:
peu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
105136014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105136014
NCBI-ProteinID:
XP_011039461
UniProt:
A0AAJ6V1N2
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MEIFSSGEDLVIKTRKPYTITKQRERWTEEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAVVKGVPIGQALDIDIPPPRPKRKPSNPYPRKLGVGPPASQVGAK
DGKLLTSASFPCCKQVLGMEKEPLPEKLNGDERPTNAKENQDDNCSEVFSLLQEPHCSSV
PSVNKNSVPTLEILKKASPFREFVSSPKEGNHDASNQSSVTVELGANQKLDNTDVKQDNS
TSEYPKSENFCSFSEKLFQQKKSDDFTGALRTDGMQTMQNYPRHVPVHVLDGSLGTCMQT
PPSDFSFQESMFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMHQSFPSFPPPFTPTH
HNQDDYRSFLHISSTFSSLIVSSLLQNPAAHAAASFASIFWPYGNVESSAVSPACAQGGF
QSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPLCAPLHTSFACPSASATAIQSVDTGQI
SATKTERKETAENPSLQGQIQNPEHTAALQAQNSASKSPKITSSDSEESGGPKLNTGPEI
TDHELTTTPHEVQDSSKTKNRKLIDRSSCGSNTPSSSEIETDALEKAEKGTEEPKEDDGN
HPASESSSRRSRSSSSMNDSWKEVSEEGRLAFQALFAREVLPQSFSPPHDLKSKMHQNED
AGEKKDADEKDGDASLINLNSKTWECCSGNQEGEKNALSRCENYGEEGLLTIGLGHGKLK
VRRTGFKPYKRCSLEAKESRTGTCSGQGEEKGPKRLRLEGEAPV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattctcttctggggaagacttggttattaagacaaggaaaccatatacaatt
accaagcaacgagaaagatggacagaggaggagcatagcaggttcctagaggccttgaag
ctctatggacgagcttggcagcgaattgaagaacatattggtacaaagactgccgttcag
atcagaagtcatgcacagaagttcttttcaaagttggagaaggaggctgttgttaaaggt
gttccaataggacaagcacttgacatagacattccaccaccacgtcccaaaaggaaacca
agcaatccttatccccgaaagttaggcgtgggtcctcccgcatcacaggtgggagcaaag
gatggaaagcttttaacttcagcttcttttccgtgttgtaagcaagttttaggcatggag
aaagaaccacttcctgagaaacttaatggagatgagaggccaaccaatgctaaggaaaat
caggatgacaattgctcagaagtattttcccttctccaagaacctcactgttcttctgta
ccttcagtcaacaagaattctgttccaacactagagattctcaaaaaggctagccctttc
agggagtttgtatcttcaccgaaggagggaaatcatgatgcaagtaatcaatcctctgtc
accgtcgagcttggagcaaatcaaaagttggacaacactgatgtcaaacaggataacagc
actagtgagtatccaaaatcagaaaacttttgctctttttctgagaaattgtttcagcaa
aagaaatcagatgattttactggagcattgcgaacagatgggatgcaaaccatgcagaac
tatccaaggcatgtccctgtacacgttctagatgggagcctgggaacatgtatgcaaact
cctccctcggatttttcgtttcaggaatccatgtttcatccaataggagaaatcccagca
tgtcctaatttatattcacatcctgctgcatccaaaaccactgatcatccaaatatttca
ccgagatcctctatgcatcaatcatttccaagttttcctcctccctttaccccaactcat
cataatcaagatgactacagatctttcctccacatatcctccacattttcaagcctcatt
gtatcttctctgctacaaaacccagcagcccatgctgcagcaagctttgcatctatcttt
tggccctatggaaatgtggagagttctgcggtttctccagcatgtgcccaaggaggtttc
caatccaggcaattgaactctgctcctagtatggcagctattgttgctgctacagtggcg
gcagcaaccgcatggtggacagcacatggactacttcccttgtgtgcccctcttcatacc
tcttttgcctgcccttctgcatctgcaactgcaattcagtctgtggatactggtcaaatt
tctgcaaccaagacagaaaggaaggaaacagctgaaaatccttctttgcagggacaaata
cagaacccagagcacactgcagctttgcaagctcaaaactcagcatctaaatcaccaaag
ataacatcatcagactctgaagagagcggaggcccaaagctaaatactggaccagaaatt
actgatcatgaattgactacaacacctcacgaggtccaggattcaagcaaaacaaagaac
agaaaactgattgaccgttcttcatgtggttcaaacacaccttctagcagtgaaattgag
acagatgcattagagaaggctgagaaaggaacggaagagccaaaagaagatgatggaaat
catccagcttccgagtctagctctcgccgcagcagaagcagcagcagcatgaatgattca
tggaaagaggtctccgaagaggggcggctggcatttcaagcactcttcgctagagaggta
ttgccccagagcttctcacctccacatgatctgaagagtaagatgcaccagaatgaagat
gctggagaaaagaaagatgcagatgagaaagatggagatgcatcactgataaatctcaac
agtaaaacgtgggagtgctgctctggtaatcaagaaggggagaaaaatgccttgtctaga
tgtgaaaactatggggaggaggggctgctgacgattgggcttggacacggaaagcttaag
gttcgtcgaaccggatttaaaccttacaaaaggtgttcactggaggctaaagaaagcaga
accggaacctgcagcggccagggcgaggagaaaggccccaagaggttacgtttggaagga
gaagctccagtttga
DBGET
integrated database retrieval system