Populus euphratica (Euphrates poplar): 105136040
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Entry
105136040 CDS
T05872
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105136040
03041 Spliceosome [BR:
peu03041
]
105136040
03036 Chromosome and associated proteins [BR:
peu03036
]
105136040
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105136040
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105136040
mRNA cycle factors
Common to processing body (P body) and stress granule
105136040
Spliceosome [BR:
peu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105136040
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105136040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105136040
NCBI-ProteinID:
XP_011039505
UniProt:
A0AAJ6V1E4
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MRTSWSDSVANSASENAAASGSSGPRPTRATYIPPHLRNQPPSSDSLAQPPAAPSLGNDR
VGYSGPVGGSRWGGGDGGLRPDHGRSGYGSGGRGGGRGVGGWNNRSGGWDRGREREVNPF
GDDGDVEPAFGEQENTGINFDAYEDIPVETSGHNVPPPVNTFADIDLGEAVNQNIRRCKY
VKPTPVQRNAIPILLAGRDLMACAQTGSGKTAAFCFPIIAGIMREQYVQRPYEGRTMYPL
ALILSPTRELSSQIHDEAKKFSYQTGVKVVVVYGGAPINQQLRELERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPCGMRQTMLFSATFPKE
IQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQEIDKRSHLMDLLHAQRETEVNSKHS
LTLVFVETKKGADSLEHLLHVNGFHATSIHGDRTQQEREMALRSFKSGKTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNMSLARPLADLMQE
ANQVVPAWLTRYASRVLHSGGKNRRSGGARFGGRDFRREGSINKGTEYYGGNSNGGYGVP
AGFGGGYNPSVASAWD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcatggtcagattctgtggccaactctgcatccgagaatgcagcagcttct
ggttcgtctggtccgcgtcctacccgtgctacttacattcctccacaccttcgtaaccag
ccgccatcttctgattctctagctcaaccacctgctgctccctcactaggaaatgatcgt
gtaggttatagtgggcctgtgggtggttctcgatggggtggtggtgatggtggtttgaga
ccggatcatgggcgttccggttatggttctggtggtagaggaggtggtagaggagttggt
ggttggaataatagaagtggtgggtgggaccgcgggagggagcgtgaggtgaatccgttt
ggtgatgatggtgatgtagagccggcttttggtgaacaagagaatacgggaattaacttt
gacgcgtatgaggatattccggtggagacgagtgggcacaatgtgccaccgcctgtgaat
acatttgcggatatagacttgggtgaggcagtgaatcagaatattcggaggtgtaagtat
gtgaagccgactccagttcagcgtaatgctatcccaattttgcttgctgggagggacttg
atggcttgtgctcagacgggttcagggaagacagctgccttttgctttccaattattgct
ggaattatgcgggagcagtatgtacagagaccgtatgaagggaggacaatgtaccctctg
gctcttattctttctcctactagggagctttcgagtcagatacatgatgaagccaaaaag
ttttcctatcaaactggtgtcaaggtggtggttgtttatggaggcgcaccaatcaaccaa
cagctccgagaacttgagagaggggttgatattcttgtggccactcctggacggttagtg
gatttgcttgagagggccagggtatcattgcagatgattagatatttggctcttgatgag
gcagacaggatgctggatatggggtttgagcctcagattagaaagatagtggaacaaatg
gacatgcccccatgtggcatgaggcagacaatgctgtttagtgccacttttcctaaagaa
atacagagacttgcatctgattttctttcaaattacatatttttggctgttggaagggtc
ggatcaagcactgatttaattgttcaaagagttgaatatgttcaagagattgacaagaga
agtcatctcatggaccttcttcatgctcaaagagaaactgaagttaatagcaagcattct
ctgacattagtttttgtggagacaaagaagggagctgactcactggaacatttgttacat
gtcaatggatttcatgctacatcaattcatggtgatagaacacaacaggaaagagaaatg
gcacttagatcattcaagagtgggaagacgccaattctagtagcgacagatgtggcagca
cggggtcttgatataccccatgtggctcatgtggtgaattttgatcttccaaatgacatt
gatgattatgttcacaggataggacgaacaggacgagctggaaaaacagggcttgctact
gctttctttaacgaaaataatatgtcattagcaagacctttagctgatctaatgcaagaa
gcaaatcaagtagtacctgcgtggctcactcgttatgcttcacgggttttgcatagtggt
ggcaagaatcggcgctctggaggagcccgatttggtggtcgtgatttcagaagagagggt
tctattaacaagggtacagaatattatggagggaacagtaacggtggatatggggttcct
gctggttttggtggggggtacaatccatccgtggctagtgcttgggattag
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