Populus euphratica (Euphrates poplar): 105136072
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Entry
105136072 CDS
T05872
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
peu03015
mRNA surveillance pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105136072
09122 Translation
03013 Nucleocytoplasmic transport
105136072
03015 mRNA surveillance pathway
105136072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105136072
03041 Spliceosome [BR:
peu03041
]
105136072
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105136072
Spliceosome [BR:
peu03041
]
Complex C
Other components
EJC/TREX
105136072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
YabA
Motif
Other DBs
NCBI-GeneID:
105136072
NCBI-ProteinID:
XP_011039562
UniProt:
A0AAJ6V0I0
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MSSQYPVLGNKLDLVQLKVTELKEELKRRKLKTSGLKDDLVKRLEEAIRIEREDEEIRRE
LVNAAEVAEDVDNGVDLENPHVVGVKNAQAVSAVTETVEVVVDDAANRDEKVDDVMVQVG
IDESVKATGSRELQEEVKMDGVNSSRVEEEELTIHATTMETRISVTESVVSEVALSVQDV
QNSGTQEANENSSIQLENEDSKPQLENESSKPSDENVVLESSAPDNQVSEVNPNLGFQVN
SDSISTDSVSINEKIELKDNIIADNVKLELDNVKPEMVEPSFSNVVPVGGESHPMDVEEP
QEKSPSVEKKDDSNGTNADMSKKNDSVDVGYSEKLNLDRSSGDDSMEEDVLESKLIDSKY
NTDEVGDKCKIKNEVPSVKEENLVNVTGKDLSTDQKEIHVQNRTCPVAPMEKRRLNDQEA
VGNAEPLKRQRRWNSESIKVPEQQSSNLTPTTTPKDGFQPAPLRRNFSRSDSSVGEEAPK
ERIVPPSQKPPTNSLRIDRFLRPFTLKAVQELLGKTGSVTSFWMDHIKTHCYVMYSSVEE
AVETRNTIYNLQWPPNGGRLLVAEFVDPQEVKIRVDAPPQSLAAPVTPSMAAPAPAPAPA
PPMLQPQPSPRQQVSRQQLPPPTSLPLPPALSNPPHARERVDLPPPPPLPEKHDPPIVTL
DDLFRKTKTAPRIYYLPLSEEQVAAKLAGHGKNTKQSAGVACKKELFQPSRGMWFVAGLG
FSEDCMMLKKLKFFLALETFQLRALYMSGSPDMWTYLVFLLNKNFNFPNLKQLVLNSLH
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacaatacccagttcttggaaataaactggacttagtccagttgaaggttact
gagttaaaagaagagcttaaaaggcgaaaattgaaaaccagtggtttgaaggatgatttg
gttaaacggttggaagaagcaattcgtattgagagggaagatgaagaaattcgcagagag
ttggtaaatgctgcagaggttgcggaggatgtggataatggtgttgatttggagaacccg
catgtagttggggtgaaaaatgcacaggcagtatcggctgttactgagacggttgaagtt
gttgtggatgatgctgctaacagagatgagaaggtggatgatgttatggttcaggttggc
attgatgagagtgtgaaagccacgggttcaagagaacttcaagaggaggtcaaaatggat
ggtgttaattcttctagggtagaagaagaggagctcactattcatgcaactaccatggag
accaggatttctgttactgagagtgtggtatctgaagtagcattaagtgtacaagatgtg
caaaattctggaacacaggaggcaaatgagaactcaagtatccagctggagaatgaagat
tcaaagccccagctggagaatgagagttcaaagccttcagacgagaatgtcgtgcttgag
tcttctgctccggacaaccaggtatctgaggtcaaccctaatttagggtttcaagtaaac
tctgattctatttctactgattctgtatcaattaatgaaaagattgaactaaaggataat
ataattgctgataatgtgaaattagaactagataatgttaagccagagatggtggaacca
tcattcagtaatgttgtcccagttggtggtgaatcacatccaatggatgttgaagagcca
caagaaaagagtccctctgttgaaaagaaagatgacagcaatggtacaaatgcagatatg
agcaagaaaaatgacagtgttgatgtggggtactcggaaaagttgaatttagacaggagt
tctggtgatgactccatggaggaagatgttctagagagtaagctaattgattcaaagtat
aatactgatgaagtgggcgataagtgtaaaataaaaaatgaagtgcccagtgtgaaggag
gaaaatctagttaatgttactgggaaggatttatctactgatcaaaaggagatccatgtt
cagaataggacttgtccagttgcacccatggaaaaaagaaggcttaatgatcaagaagct
gttgggaacgcagaacctttaaagcggcaacgaagatggaattctgagagcatcaaggtt
cctgaacagcaaagctctaatcttacacccaccaccacaccaaaggacgggtttcaaccg
gctcctctccgacgcaacttttctcgatctgactcctctgttggtgaggaggcacccaag
gagcgcatcgttccaccatcacaaaaacctcctaccaattctctcagaattgatcgtttt
ctgcgtccttttactctgaaagctgtccaagaactcctgggcaaaaccgggagtgtcacc
agtttttggatggatcatatcaaaacccattgctatgttatgtattcatctgtggaagaa
gctgtggagacacgaaatactatttataacctacaatggccgccaaatggtggacgtctt
ttagtggccgagtttgttgatcctcaggaagttaaaatccgggtggatgctcctcctcag
tctctagctgcacctgtcactcctagtatggctgcacctgcacctgcacctgcacctgcc
ccacccatgttgcagccacagccctctccccgtcaacaggtttctaggcagcagcttcca
cctccaacttcccttccacttccaccagcgctgtctaacccaccccatgccagggaacgg
gtagatcttcctccaccccctccacttcctgagaaacatgatcctccaattgtcaccctg
gatgacctctttcggaaaaccaaaacagctcctcggatctactatctaccattatcagag
gagcaagtcgcagcaaaacttgcaggacatggcaaaaacaccaagcagtctgcaggtgtt
gcttgtaagaaggaattgttccagccaagcagaggaatgtggttcgttgctggacttggt
ttttctgaagactgcatgatgttgaagaagcttaagttttttttagcattagaaactttt
caactaagagctctctatatgagtgggtcgcccgacatgtggacatatcttgttttcctg
ttgaacaagaattttaactttcccaatcttaagcagttggttctaaattccttgcattga
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