Populus euphratica (Euphrates poplar): 105136335
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Entry
105136335 CDS
T05872
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peu03009
]
105136335
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
90S particles
Other 90S particles
105136335
Pre-60S particles
Other pre-60S particles
105136335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
Nipped-B_C
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
105136335
NCBI-ProteinID:
XP_011039935
UniProt:
A0AAJ6V3J8
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MEGIEFDAPSLSFPENDFCDSILSRYSTSTQDDHQHLCAIIGTMSQELKDQNLPCTPIAY
FGAACSSLDRLSSSYSDTSPYVIDSLITILSLALPRISIPILKKKRESVSNVVVRVLKLN
YSVTAGAVVSGLKCVAHLLSIRDSFNWDDISQLFGVLLSFMTDSRIKVRRQSHSCIRDTL
LNFQGTPALAPASEAITNSFEKFLLLAGGSNAVASTDGPKGAQHVLYILDALKECLPLLS
VKCVTAILKYFKTLLELRQPVVTRRVTDSLKVVCLQPALEVPAEPLLDLLCSLALYASTN
ETSADNMTFTASLLDVGMKKVYSLNRQICVVKLPIIFNTLKDILASEHEEAIFAATQALK
NSINSCIDESLIKQGVDQITINKNAETRKCGPTVIEKVCAIIESLLDYHYSAVWDMVFQV
VSTLFDKLGNYSSYFMRGTLKNLADMQRLPDEDFPYRKQLHESLGSALGAMGPETFLSFL
PLKLEVDDLSEVNVWLFPILKQYTVGARLSFFTESVLSMIGLIKKKSRQLELDGRIISVR
SADALVYSLWSLLPSFCNYPLDTAESFQDLEKALCGALSEECDIRGIVCSALQVLIQQNK
RIMEEQDDLTGTEVGIAEQHAIARYTLQVATDNLRVLRSSARNLLTVLSGILLESPKDDG
GLLQSTIREFSSIADKEVVKRIYLKTMQKLLAVTQKATKAENSRDSNSMQIDDSSNDSRA
RLFDLAVSLLPGLDGEEINVLYSAVKPALQDMEGLIQKRAYKVLSIILQRYDGFITPRFG
ELLQLMIDVLPSCHFSAKRHRLDCIYCLLVHIPKDSEQRRHEILTSFLTEIVLALKEVNK
RTRNRAYDVLVQIGHTFGDEENGGKKENLYQFFNMVAGGLALESPHMISAAMKGVARLAY
EFSDLVSIAYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSQAEGLQMFLGSVVEGLLR
WQDDTKNHFKAKVKHILEMLVKKCGLDAVKAVMPEEHMKLLTNIRKIKERGERKHAASSD
EIKSHMSRATTSRISRWNHTKIFSDFSDGETENSDGEYMDTKTVSGRHSKFSSQLKRKAS
LRSKIIHRSDKSLPEDLFDQLEDEPLDLLDRYKTRSALRSTAHLKRKQESDDDPEIDCEG
RLIVREGGKPKKEKPSNPDSDARSEAGSFKSLNSKKTQKRRKTSNSGWAYTGSEYASKKA
GGDVKRKDKFEPYAYWPLDRKMMSRRPEHRAAARKGMASVVKLTKKLEGKSASTALSMKL
IKSNSQKKGSKRKSR
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatcgaatttgatgccccgtcactctccttccccgagaatgatttctgcgac
tccattctctcacggtactccacctccacccaagacgaccaccagcacctctgcgccata
atcggcaccatgtcacaagaactcaaagaccaaaacctcccttgcacacctatcgcttac
ttcggcgccgcatgctcctccctagaccgcctctcctcctcctactctgatacttcccct
tacgtgatcgattctcttattaccatcctctctctagctcttcctcgaatttcaattcca
atattgaagaaaaaaagagaatcggtttccaatgttgttgtgcgggttttgaaattaaat
tattctgttacagctggagctgttgtttcgggattgaaatgcgtggctcatttgttgagt
atcagagatagttttaactgggatgatatttctcaattattcggagtcttattaagtttc
atgaccgattctcgcataaaggtgagaaggcaatcccactcttgtatccgtgacaccttg
ctaaattttcaaggtacaccagcattagctccggcgagtgaagccatcaccaattctttc
gaaaagtttcttcttcttgccggtggatccaatgcagttgcttctactgatgggcctaaa
ggagcccaacacgttctatatattctcgatgccttaaaagaatgtcttcctcttttatca
gtcaagtgtgtgactgcaattcttaagtacttcaaaactctcctcgagctgcggcaacct
gttgttactaggcgtgtgactgatagtctgaaagtagtttgcttacaaccggctttagag
gttccggctgaaccattactcgacttgctttgttcactagctctttatgcttctacaaat
gagacgtctgcggataacatgacattcactgctagcttgttggatgttggaatgaaaaaa
gtttattccttaaataggcaaatttgcgttgttaagctaccaattatattcaatacactc
aaagatattttggcgtctgaacatgaggaggccatctttgcggccacacaggcattgaag
aactcaataaatagttgtattgatgaaagcttgatcaagcagggagtagatcagattact
atcaacaaaaatgctgaaactagaaagtgtgggcctacagttatagaaaaagtgtgcgca
atcattgaaagcttacttgattatcattacagtgcagtctgggacatggtattccaagtg
gtttcgaccttgtttgataaattaggaaactattcttcttattttatgagaggaaccctt
aagaacttggcagatatgcagagattacccgatgaagattttccttaccggaaacagttg
catgaatcccttggatctgctcttggtgcaatgggtcctgagacatttttaagcttccta
cctcttaaattagaggtcgatgacctatctgaagttaatgtttggctctttcctattctg
aagcagtatactgttggtgcccgtttaagcttttttacagagtcagttctgagtatgatt
ggtctgataaagaaaaaatctcgacagctggagctagatggaaggatcatctcagtgagg
agtgctgatgctcttgtatactccttgtggtccttattaccttccttttgcaactatcct
ttggatactgcagaaagtttccaggatctggagaaagctttgtgtggtgcacttagtgaa
gaatgtgatattcgtggaatagtttgttctgccctgcaggttcttattcaacagaataag
agaataatggaggagcaagatgatctaactggtacagaagttggtatagctgaacagcat
gctattgcccgctataccctgcaggttgcaacagataatttgagggtgcttaggtcttct
gctcgtaacttgttgactgttttgtctgggatcctcctggaatctccaaaagacgatggt
ggtcttctgcagtctacaattcgtgagttttcctcaatagcggataaagaagtagttaag
aggatctacttaaagacaatgcagaagcttttggctgtcacacaaaaggccacaaaagct
gagaattctagagattccaactccatgcagattgatgattcatcaaatgactcgagagca
cggctatttgacctggcagtttcacttttgccaggattggatggtgaagagatcaatgtt
ttatatagtgcagtaaagcctgcattacaggatatggaaggtctgatccaaaagagggca
tacaaagttctttcaattattctccagaggtacgatggatttattacaccacgatttggg
gaactgcttcagctcatgattgatgtgctaccctcatgccatttctctgccaaacggcac
agacttgattgtatttactgtctactagttcatatccccaaggactcagagcagaggaga
catgaaatccttacttctttccttactgagatagtacttgctctgaaagaggttaacaaa
agaacgagaaatagagcttacgatgtgcttgtccaaattggtcatacctttggagatgaa
gagaatggcggaaagaaagaaaacttgtatcaattttttaacatggttgctggaggcctt
gctcttgaaagtcctcatatgatcagtgcagcaatgaaaggtgtagctcgtctggcatac
gagttttcagacctggtttctattgcttacaagttgcttccatccacatttctccttctg
cagagaaagaacagggagatcatcaaagctaatttaggtttgctgaaggtgctagtggcc
aaatcacaagctgaagggctgcaaatgttcctggggagtgtggtggaaggcttgctgaga
tggcaagatgacaccaaaaaccacttcaaagctaaggttaagcacatcctggaaatgcta
gtcaagaaatgtggtctggatgctgtgaaggcagtgatgcctgaagaacatatgaaactc
cttactaacatacggaagataaaggagcggggagagaggaagcatgcagcaagctctgat
gaaattaaatctcatatgtcaagagctactacatccaggataagcagatggaaccatact
aagatcttctctgattttagtgatggggagacagagaacagtgatggtgaatacatggat
acgaagacagtttcaggtcggcatagcaagttttcctcccagctcaaacgcaaagcttca
ctaaggtctaaaataatacacaggtcagacaagagcttgccagaagacttatttgaccag
ttagaagatgagccacttgacttacttgatcggtacaaaacacgatcagccctccgatca
accgcgcatcttaaaagaaagcaggaatcagatgatgatccagagattgactgcgaaggg
cggctgatagttcgtgaaggaggtaaacctaagaaggagaagccctccaaccccgattca
gatgcgaggagtgaagcaggcagtttcaagtcactgaactccaagaaaactcagaagcgc
aggaaaacttcaaattctgggtgggcctacactggaagtgaatatgccagcaagaaagct
ggtggggatgtgaagaggaaggacaagtttgagccatatgcatattggcccttggatcgc
aagatgatgagtcggagaccagagcatcgtgcagctgctaggaaaggtatggctagtgtt
gtaaaattgaccaagaagcttgagggcaagagtgcctcaactgcactgtctatgaagctc
atcaaatctaacagtcagaagaaaggcagcaagagaaagagcaggtga
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integrated database retrieval system