KEGG   Populus euphratica (Euphrates poplar): 105136461
Entry
105136461         CDS       T05872                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4 isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03020  RNA polymerase
peu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105136461
  09124 Replication and repair
   03420 Nucleotide excision repair
    105136461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peu03021]
    105136461
   03400 DNA repair and recombination proteins [BR:peu03400]
    105136461
Transcription machinery [BR:peu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105136461
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105136461
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 105136461
NCBI-ProteinID: XP_011040120
UniProt: A0AAJ6V2K3
LinkDB
Position
Unknown
AA seq 222 aa
MVFKITQQTGDRREENRKHTTLSCKMEKGGGKGFSLPSKEPKSSLKSSSTKGKDDSNKGR
KIHFESEGNLSKGGKGGKIANGGKSPMTKEPPPLELKIESELPQNAKPLMDCEAAQILQG
IQDQMVLLSQDPTIKLPVSFDKGLQYAKNGARYTNPQSVRRVLEALRKYGVSDGEISLIA
NVFPENADEAFALVPSLKSKASTLREPLKDILGELAKFKQPA
NT seq 669 nt   +upstreamnt  +downstreamnt
atggtgttcaaaatcactcaacagacaggggataggagagaagagaacagaaagcataca
actttaagctgcaaaatggagaaaggaggaggaaaagggttctctctcccatccaaagag
cctaagtcttctctcaagtcctcatcgactaaaggaaaggatgattcaaataaaggaagg
aaaatccattttgagtctgaaggtaatttgagcaagggggggaaaggaggcaagattgca
aatggtgggaaaagtccaatgactaaagaaccacctccacttgagctaaaaattgagtca
gaactcccacagaatgccaaacccctgatggattgtgaggctgcacaaatcttacaagga
atccaggaccagatggttctgctgtctcaggatccaaccatcaaacttcctgtgtcattt
gataaggggttgcagtatgctaagaatggtgcccgttatacaaaccctcagtctgttaga
cgagttcttgaggcgttgagaaaatatggtgtctctgatggagagatatctctaatcgcc
aatgtctttcctgaaaatgctgatgaagcttttgcacttgtcccatctttgaagtctaag
gctagcacacttagagaacccctgaaggacattttaggcgagctagcgaagtttaaacag
ccagcatga

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