Populus euphratica (Euphrates poplar): 105136898
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Entry
105136898 CDS
T05872
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105136898
03036 Chromosome and associated proteins [BR:
peu03036
]
105136898
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105136898
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105136898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
Tex_central_region
HHH_9
HTH_44
HHH_3
Tex_N
MRP-S34
Motif
Other DBs
NCBI-GeneID:
105136898
NCBI-ProteinID:
XP_011040704
UniProt:
A0AAJ6Y3F9
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MGKNVVSDEEDEVELEDEDEREPVDGDKIGRDDEEEEEDEEGQDEYEKDDFIVDDVEEEE
EVEEEEDRADSDEERHKKKKKKKKREAEDVLDEDDYELLRDNNVYHHRPKDSKKFKRLKK
AQRDSDEDRYGLSDDEFDRSGKGGRTAEEKLKRSLFGDDEGVPLEDMPEEEEQEEVEEDV
DIGDEDEMADFIVDEDDDDGTLVRRKKLKKKKSQQASGVSSYALQEAQEIFGDVDELIQI
RRQGLESSEWRERRLEDEFEPTVLSEKYMTEKDDQIRMTDIPERMQVSEGSTGPPPLDDF
SIMEESNWIYSQIASGTLPLFAESGLLINKDDVTRFLELHHIQKLDIPFIAMYRKEECLS
LLKDPEQCEDDENPYDTGRIPTFKWHKVLWAIQDLDRKWLLLQKRKSALNAYYNKRFEEE
SRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHFPPGEVGVDEGQYKRPM
RRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETPEEMASNFTCAMFE
SPQAVLKGARHMAAVEISCEPCVRRYVRLIFMDKAVVSTSPTSDGKAAIDSFHQFAGIKW
LREKPVKKFEDAQWLLIQKAEEEKLLQVTIKLPQKVMDQLIDDCNGRYLSIGVSKYAQLW
NEQRSLILKDALFAFLLPSMEKEARSLLTSRAKNRLLWEYGKVFWNKVSVGPYQRKESDI
SMDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYAGSLTLRSQHANDQQRKKNDQQ
RVLKFMTDHQPHVVVLGAVHLSCTKLKDDIYEIIFKMVEENPRDVGHEMDELSIVYGDES
LPRLYENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMVATLCGPSKEILSWKLNPLENF
LTPDDKYMVIEQVMVDATNQVGLDINLATSHEWLFAPLQFISGLGPRKAASLQRSLVRTG
AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDVLDDTRIHPESYGLAQEL
AKVIYEKDSGDVNDDDDALEMAIEHVKERPNLLKTFVFDKYLEDKKRENKKETFMDIRRE
LIQGFQDWRKQYKEPTQDEEFYMISGETEDTLAEGIIVQATVRRVQGGKAICALESGLTG
ILTKEDYADDWRDIPELSDKLHEDDILTCKIKSIQKNRYQVFLVCKDSEMRNNRYQQARN
LDRYYHEDQSSLRSEQEKVRKERELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDPGES
IIHPSSRGPSYLTLTLKVYNGVYAHKDIVEGGKEHKDITSVLRIGKTLKIGEDTFEDLDE
VMDRYVDPLVSYLKAMLSYRKFRSGTKAEVDELLRIEKSQQPTRIVYAFGICHEHPGTFI
LTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQKHIDDSLHESAPSIRSVAAMV
PMRSPATGGSSWGGSNYEGGRRGQSFDRDRSSGPGSRTGRNDYRSGGSRDGHQSGAPRPY
SGRGRGRGSYNNGGGSNNGNERRDSGYDKPRWDSGTKDGDEGWGSFPGAKVQNSPGREAF
PGGWGTGASSGGNGWGGGASGGDNSGWGPGTGGGTDSGNSGRGTTSLKRDSAQRGWGAAG
GGNGNGSDSGHGSRGVGTNDENSGWGQ
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaacgtggtttctgacgaagaagatgaggtggagttagaagacgaagatgag
agagagccagttgatggagataaaattggacgagacgacgaggaggaggaggaggatgaa
gaagggcaggatgaatatgagaaggatgattttatagtggatgatgtcgaggaggaagaa
gaggtggaagaagaagaggacagggcagatagcgacgaggagaggcacaagaagaagaag
aaaaagaagaaaagagaagctgaggatgtactcgatgaagatgactacgagctcctgcga
gacaacaacgtgtaccaccatcggccaaaggatagcaaaaaatttaagcgtttgaagaaa
gctcagagggattcagatgaggacagatatgggctttctgatgacgagtttgatagaagt
ggtaaaggtggtcgaactgctgaggagaaactgaagcgcagcttatttggtgatgatgaa
ggggttccacttgaggatatgcctgaagaggaggagcaagaagaagtggaagaggatgtg
gacattggtgacgaggatgagatggctgattttattgtggatgaagatgatgatgatgga
actcttgtgagacgcaagaagctaaagaaaaagaaatctcagcaggcatctggagtttca
tcttatgccttgcaagaagctcaagagatatttggtgatgttgatgaactcatacagata
cgcaggcaagggttagaatctagtgaatggagagaaaggagactggaagatgaatttgag
ccaactgtcctttctgaaaaatacatgactgagaaagatgatcagatccggatgactgat
attccagaaagaatgcaggtatctgagggaagcactggtcctcctccattggatgatttc
agcataatggaggagagcaactggatttatagtcagattgcaagtggaacattgcctttg
tttgcggagagtggactgcttataaacaaggatgatgtcacccgatttttggaattacat
cacattcagaagttagatattcccttcattgctatgtatcggaaggaagagtgtttaagc
ctgttgaaagatcccgagcaatgtgaagatgatgaaaatccttatgacactggtagaatt
cccacattcaagtggcacaaggtgctttgggccatccaggacttggacaggaagtggtta
cttcttcagaaacgaaagagtgccctcaatgcttactacaataagcgctttgaagaagaa
tctcgacggatatatgatgaaacaagacttaatttaaatcagcagctgtttgagtcaatt
cttaaatcactgaagactgctgaatcagaaagagaggttgatgatgttgatgcaaaattt
aacctgcattttccaccaggtgaggttggggtggatgaaggacagtacaagaggcccatg
cggagatcacaatacagtatctgtagtaaggctggtctatgggaagttgcaagcaaattt
ggttacagtgccgagcaactgggaatgcagttatctttattaaagatggaggacgagttg
caggatgccaaggaaacaccagaggagatggcttcaaattttacatgtgcaatgtttgaa
agtccccaagcagttcttaaaggggctaggcacatggctgcagttgagataagttgtgag
ccgtgtgtcaggagatatgtccgtttaatttttatggacaaggctgtagtgtctacgagt
ccaacatcagatgggaaagctgctatagattctttccatcagtttgcaggtatcaagtgg
ttgcgtgaaaagccagtcaagaagtttgaggatgcacagtggctccttatccagaaagct
gaagaggagaaacttcttcaagtcactattaagcttccacaaaaagttatggatcaattg
attgatgactgtaacggtcgctacctgagtattggtgttagtaaatatgctcaactgtgg
aatgagcaaaggagtttgatactgaaggatgcactctttgcttttttgttgccttcaatg
gagaaagaggctaggtcattgttgacaagtagagctaaaaaccggttgctttgggaatat
gggaaggttttttggaataaagtctctgtgggcccatatcaacgtaaagaaagtgatatt
tccatggatgatgaagctgcacctagggttatggcttgctgttggggtcctggaaagcca
gctactacttttgtgatgctagattcatctggggaggttttagatgtactttatgctggg
tcccttaccttacgatctcagcatgctaatgatcagcaacgcaagaaaaatgatcagcaa
cgtgttctgaaatttatgacagaccaccagccacacgtggttgttcttggagctgtgcac
ttgtcttgtactaaactgaaggatgacatttacgagattatttttaaaatggtggaggaa
aatcctagagatgttggacatgagatggatgagctgagtattgtgtatggggacgagtct
ctcccccgtctttatgaaaattctcggatttcttctgatcaactacctgggcagtcaggc
attgttaaacgggctgttgctcttggccgttatctacaaaatcccttggctatggttgca
acgctatgtggaccatctaaggagattctatcttggaaactaaatcctttggagaacttt
ctcactcctgatgataaatacatggtgattgaacaagtcatggtagatgccacaaaccag
gtgggcttagacattaatttggccacaagccatgaatggttatttgctcctttacaattc
atttctgggcttggacccagaaaggcagcatctttgcagagatctctggtaagaactgga
gcgattttcactcgcaaggacttcgttacagctcatggtcttggtaaaaaggtgtttgtc
aatgcagttggttttttgcgtgtccggaggagtggccttgctgctagcagcagccagttc
attgatgtgttagatgatacaaggatacatccagaatcctatggtctcgcacaggagttg
gcaaaagtcatttatgaaaaggacagtggtgatgtaaatgatgatgatgatgcactcgag
atggcaattgagcatgttaaagagcggcctaatttattgaaaacatttgttttcgataag
tatctcgaagacaagaagcgggaaaacaagaaggagactttcatggatataagaagggaa
ttaatacaaggtttccaagattggcgtaaacagtataaagaaccaacccaggatgaggaa
ttttatatgatttcaggtgaaaccgaggatacccttgctgaagggataattgtacaagcc
acagttcgcagggtgcaaggtggaaaggcaatatgtgcattggaatctggtctgactggg
attcttacaaaggaggactacgctgatgattggagggatattcctgagttgtccgacaag
ctgcatgaagatgatatactgacttgcaagataaaatcaattcagaagaatagatatcaa
gtgtttcttgtttgcaaagacagtgagatgagaaataaccgatatcagcaggcccgaaac
cttgatcgctattatcatgaagaccagagcagtctgaggagtgagcaggagaaggttcgc
aaagagagggaacttgcaaagaaacatttcaagcctaggatgattgttcatccacgcttc
cagaatataacggctgatgaagcaatggagttcttatctgacaaggatcctggagaaagt
attattcatcctagttctcgtgggccgtcgtatttaactctaacccttaaagtttacaac
ggagtttatgctcacaaagacatagttgaaggtgggaaggaacacaaagatatcacgagt
gtacttcgtattgggaagacattgaaaattggggaggacacatttgaggatttggatgag
gtaatggaccgctatgttgatcccttggtgagctacctaaaggcaatgctaagttatcgc
aagttcagaagtggcaccaaagcagaagttgatgagctccttaggattgagaaatcacaa
cagcctactaggatagtttatgcatttggcatttgtcatgaacacccaggcacattcatt
ctcacttatataaggagtacaaatccccatcacgagtatgttggtctatatcccaaggga
ttcaagttccgaaagcgtatgtttgaggacattgatcggctggtggcatattttcaaaag
catatagatgattccttgcatgaatcagcaccatcaattaggtcagttgctgctatggtc
ccaatgcgaagccctgcaactgggggctcgtcctggggcggttcaaactatgaaggtggt
cggagagggcagtcttttgacagagatcgttcttctggtccaggttccaggacaggtcga
aatgattatagaagtggtggtagtcgagatggtcaccagagtggggcaccaagaccatac
agtggacgaggacgtggtcgtggctcatataacaatggcggaggaagtaataatggcaat
gaaaggcgggattctggttatgataagcccagatgggattcaggaaccaaggatggtgat
gaaggctggggcagtttcccaggagccaaagtccaaaactcacctggcagggaagctttt
cctggtggctggggaactggtgcaagcagtggtggaaatggttggggtggtggagctagt
ggtggtgataatagtggttggggccctggaactggtggtgggactgatagtgggaattct
gggcggggtactaccagcttgaagagagattcagcacaaagggggtggggtgctgctgga
ggtggaaatggcaatggtagtgactctggtcatggaagtcgtggtgtaggcactaacgat
gagaattctgggtgggggcaataa
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integrated database retrieval system
