Populus euphratica (Euphrates poplar): 105137042
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Entry
105137042 CDS
T05872
Name
(RefSeq) LOW QUALITY PROTEIN: ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105137042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105137042
03110 Chaperones and folding catalysts [BR:
peu03110
]
105137042
03029 Mitochondrial biogenesis [BR:
peu03029
]
105137042
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105137042
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105137042
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105137042
Chaperones and folding catalysts [BR:
peu03110
]
Heat shock proteins
HSP60 / Chaperonin
105137042
Mitochondrial biogenesis [BR:
peu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105137042
Exosome [BR:
peu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105137042
Exosomal proteins of other body fluids (saliva and urine)
105137042
Exosomal proteins of breast cancer cells
105137042
Exosomal proteins of colorectal cancer cells
105137042
Exosomal proteins of bladder cancer cells
105137042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-GeneID:
105137042
NCBI-ProteinID:
XP_011040914
UniProt:
A0AAJ6Y3N0
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MATSNALSTASILCSPNQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQNSRAS
LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR
PVKGRDDIKAIASISAGNDELIGTMIADAINKVGPDGVLSIESSSSFETMVEVEEGMEID
RGYISPQFVTNPEKLICEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG
EALATLVVNKLRGILNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ
LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV
AVIKVGXTETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDAD
ERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVID
PAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPAADATQGQYAV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatctaatgcgctctccacagcttccattctttgctctcctaaccagggaggg
ctgaggaggagaggcaatcagcaaaacaactcaaggcttaattatgggctatcaagcaga
agattttctgtgcgagcaaatgccaaggatattgcatttgatcagaactccagggcttcc
ctccaatccggaattgataagcttgccgatgctgttggccttactcttggtcctcggggt
agaaatgttgtcttagatgaatttggaagtccaaaggtggttaatgatggggtaacaatt
gcgcgagctattgagctacctgatcccatggaaaatgctggtgcggctctcatcagagag
gtagcaagtaaaactaatgattcggctggtgatggaacaacaactgcatcagttcttgca
cgggaaataatcaaactagggcttttgagtgtcacctctggagcaaatccagtttctata
aaaaggggaattgataaaactgtgcagggcttggtagaagagctagagaagaaggccaga
cctgttaaaggtcgtgatgacattaaagccattgcatcaatttctgctggaaatgatgaa
ctcatcggcacaatgattgctgatgcaatcaacaaggttgggcctgatggtgttttatca
attgagtcttcatcttcctttgagaccatggttgaagtcgaagaaggaatggagatagat
agaggttacatctctcctcaatttgttacaaatccagagaagttaatttgtgaatttgag
aatgctagagtgctggttacagatcaaaagatttctgcaatcaaagacataattcccttg
ctagaaaaaactactcaattgagatctcctttgcttataattgctgaggatgtgacaggt
gaggctttggctacccttgtggtgaacaagctacgtggtatactcaacgttgctgctatc
aaggctcctggttttggcgaaaggaggaaagctatgcttcaagatattgccattttaaca
ggagctgaatttcaagctagtgatcttggtttgagcattgaaaacacatcaattgagcag
cttggtttggccaggaaggttacaatcagcaaggattccacaaccatcattgctgatgct
gcatcgaaagatgaattgcaagctaggattgcacaattgaaaaaagagttgtctgagact
gattctgtttatgactcagagaaactggctgaaagaattgccaaattgtctggtggagtt
gctgttatcaaagtgggtncaacggagactgagcttgaggatcgaaaactacgcattgag
gatgccaagaatgcaacttttgctgccatagaggaaggaattgtgcctggtggtggtgct
gctttggttcatctctcaacttgtgttcctgcaatcaaggacaaaattgaagatgcagat
gagcggttaggtgccgacattgtgcagaaggccctggtatcaccagcatcattgattgct
caaaatgctggaattgagggtgaggtggttgtggagaagctgaaggctagtgaatgggag
attggctataatgccatgacagacaagtacgagaatttgatggaggctggagtcattgat
ccggcaaaggtgacaagatgtgctctgcagaattctgcatctgttgctggaatggtcttg
accacccaggccattgttgtagaaaagcccaagcccaagacacctgcagctgatgctaca
caaggccaatatgctgtgtaa
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