Populus euphratica (Euphrates poplar): 105137185
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Entry
105137185 CDS
T05872
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105137185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105137185
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105137185
Spliceosome [BR:
peu03041
]
Complex A
U2 snRNP components
U2 related factors
105137185
Complex B
105137185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
105137185
NCBI-ProteinID:
XP_011041135
UniProt:
A0AAJ6V5W4
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MEDVKPKPRKNDYLARKEEKEDSKRIHRDRDRERNGERHRDREKRERENSRCSERDKSSD
SDDKEREKEKHRVRGRDDRATRRRVDDRERVKDRKRDREERDRERDIAKEEKRERERERE
KDRERESGKREREREKDRERERRERDREERERERGREKRERRTREREKHRELSSDSDDDS
GERDSKVQRRDNDDSKERVHEQSISRSNRHVDNSEESLRKKSGKEDGDKNESKTREDELE
EEQKKLDEEMEKRRRRVQEWQELRRKKEETESEKGGEEANVDESKSGKTWTLEGESDDEE
APPTGKSEMDMDQEENAIPDKEAGDAMMVDTEDDISAPQSEVDAVNVDEEIDPLDAFMNS
MVLPEVEMLNNVVVTQIADDNKADSKKKDKKDEGINGGQRKKGSHKSLGRIIPGEDSDSD
HGDLENSEVLLEDEDDDEFMKRVKKTKAEKLSLVDHSKIDYSPFRKNFYIEVKEILRMIP
EEVTAYRKLLELKIHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMTIQAQALPIIMS
GRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVEAGEGPIGLIMAPTRELVQQIHSDIRKF
TKALGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVM
DEADRMFDMGFEPQITRIVQNIRPDHQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV
VNKDINQLVEVRPEGQRWFRLLELLGVWSEKGKILVFVQSQDKCDALFRDLLKFGHPCLS
LHGGKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKDLELVINYDVPNHYEDYVHRVG
RTGRAGRKGCAITFFSEDDARYAPDLVKALELSEQVVPQDLKALADGFLVKVNQGLEQAH
GTGYGGSGFKFNEEEDEKRMAAKKAQAKEYGYEDEKSDSEDEDEVVRKAGGDISQQTALA
QQIAALAAVSKIPAPVAPTPHSVTQLLSNGSLPVPLNQGQAVASVTGLPFAHNNEAAARA
AAMAAAMNLQHNLARIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAIT
TRGQFFPPGKVPGPGDRKLYLFIEGPTEQSVKRAKADLKHVLEDITNQTYQLPGGAQPGK
YSVV
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtgaaacctaaacctagaaaaaatgattatttggcacggaaggaggagaaa
gaggattctaaaaggattcatcgagatagagacagggagaggaatggagagaggcataga
gacagagagaagagagaacgcgaaaacagtaggtgttccgagagagacaagagtagtgat
tctgatgacaaggaaagggagaaagagaagcacagagtcagaggcagggatgatagggca
acaaggaggagggttgatgatagagagagagttaaggacaggaagagagacagagaagag
agagacagggagagggacatagcaaaagaggagaagagggagagggagagggagagggag
aaagatagagaaagagaaagtgggaagagggaacgtgagagggagaaagacagagaaagg
gagaggagggagcgtgatagagaagagcgagaaagggagaggggcagggagaagagggag
aggaggactagggaaagggagaagcacagggaattgagtagtgacagtgatgatgactcc
ggggagcgtgatagtaaagtgcaaaggagagacaatgacgactccaaggagagagtgcat
gagcagagcattagcaggtcaaacaggcacgtggataacagtgaagagagcctaaggaaa
aagagtggcaaggaggacggtgataagaatgagagtaaaacccgagaagatgaattagag
gaggagcagaagaaattggacgaggagatggagaagaggaggagaagagtccaggaatgg
caagaactgagaaggaagaaggaagaaactgagagtgaaaagggtggggaagaagccaat
gttgatgaatctaagagtggtaaaacctggactcttgaaggagaatctgatgatgaagaa
gcacctcccactggcaaatccgagatggacatggaccaggaggaaaacgcaatacctgat
aaagaagctggagatgcaatgatggtggacactgaggatgacatttctgctccacaaagt
gaggttgatgctgttaatgtggatgaggaaattgatccattggatgctttcatgaattct
atggtcttacctgaggttgagatgctaaacaatgttgtggttactcaaattgctgatgat
aataaagcagactcaaagaagaaagataagaaggatgaaggaataaatggaggacagcgg
aagaaaggctcacataaatctctagggagaattattcctggagaagattctgattcagac
catggggaccttgaaaatagtgaagttcttttagaagatgaggatgatgacgagttcatg
aagagggtgaagaaaacaaaagctgagaaactgtcccttgttgaccactcaaagattgat
tacagtcctttccgcaagaatttctatattgaagtgaaggagatcttgaggatgattcct
gaggaggttactgcttataggaaactactggagttgaaaatacatggaaaggatgtgccg
aaaccaattaaaacttggcaccagacaggactcacaagtaaaattttggagacaataaag
aaacttaattatgagaaaccgatgacaattcaagctcaggcactgcctataattatgagt
ggacgggactgcataggcattgcaaaaactggttctggtaaaacccttgcatttgtgctg
ccaatgctgaggcatatcaaggaccagcctcctgttgaagctggagaaggaccaattggg
cttataatggcgcccacaagggagcttgtgcagcagatccacagtgatattaggaagttc
actaaggccctaggtataagatgtgtgcctgtttatggaggttctggtgttgcccagcaa
attagtgaattgaaacgggggacagagatagttgtctgtactccaggcaggatgattgac
attctttgcactagtggagggaaaatcactaatcttcgtagagttacatatctggttatg
gatgaagccgatcggatgtttgacatgggattcgaacctcaaatcactagaattgtccaa
aatattcgaccagatcatcaaactgtgctcttttctgccactttccctcggcaggttgaa
actttggctcgtaaagtactgaacaaacctgtggaaatacaggtaggtgggaggagtgtg
gtgaataaggacatcaatcagctggttgaggtaagaccagaaggtcaaaggtggtttagg
ttgttagaactacttggtgtatggagcgagaagggaaaaattttggtatttgtccaatca
caggacaaatgtgatgcgttgtttagggacttgctgaagtttggtcatccttgcctctca
cttcatgggggtaaggatcagacggaccgtgaatccaccatttcggattttaagagcaac
gtctgcaatttgttgattgcaacaagtgttgcagccagaggtttagacgtgaaggatcta
gaattggtgatcaattatgatgttccaaaccactatgaggattatgttcaccgtgttggt
cggactggccgagctggtcgcaaaggctgtgccatcacttttttctctgaggatgatgca
agatatgcaccggatcttgtaaaagcattagaactctctgagcaagttgttccacaagac
ttgaaagcccttgctgatggtttcttggtgaaagtgaaccagggtctggagcaagcccat
ggaactggttatggtggaagtggttttaaattcaatgaagaggaggatgaaaagagaatg
gcggcaaagaaagcacaggcaaaagaatatggctatgaggatgagaagtctgattcagaa
gatgaagatgaagttgttcggaaggcaggtggtgacatctcacagcagactgcccttgct
cagcagatagctgctcttgctgctgtctcaaaaatccctgcacctgtggcaccaactcct
cactctgttactcaattgctttctaatggtagtttacctgttcctctcaatcaaggtcaa
gcagtcgcatctgtgactgggctgccttttgctcataataatgaagctgcagccagggca
gcagcaatggcagccgccatgaatttgcaacacaaccttgcaaggatccaggctgatgca
atgcctgaacattatgaagcagagctggaaatcaatgattttccccaaaatgctaggtgg
aaggttacccacaaggaaactttgggcccaatttcagattggactggtgctgccattacc
accaggggacagtttttcccaccaggcaaggtgccaggaccaggagatcgcaagctgtac
ctgttcattgagggccctactgagcagtctgttaagagagctaaagctgatctaaaacat
gttttggaagacatcacgaaccaaacatatcaacttcctggtggagctcaaccaggcaaa
tactctgttgtataa
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