Populus euphratica (Euphrates poplar): 105137333
Help
Entry
105137333 CDS
T05872
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105137333
03036 Chromosome and associated proteins [BR:
peu03036
]
105137333
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105137333
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105137333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
HHH_9
Tex_central_region
Spt6_S1
HHH_3
HTH_44
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
105137333
NCBI-ProteinID:
XP_011041349
UniProt:
A0AAJ6Y427
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MGKNVVSDEDEVEFEDEEREPVDGDRIDRHHDDEEEEEDEEGQDEYEKDDFIVDDVEEEE
EADEEEERADSDEERHKKKKKKKKREAEDVLDEDDYELLRDNNVYHHRPKDSKKFKRLKK
AQRDSDDDRYGLSDDEFDGSGKGGRTAEEKLKRSLFGDDEGIPLEDMPEEEEQEEVEEDG
DIGDEDEMADFIVDEDDEDGTLVRRKKLKKKKSRQASGASSSALQEAQEIFGDVDELIQM
RKQGLESSEWRERRLEDEFEPTVISEKYMTEKDDRIRMIDIPERMQVSEESTGPPPLDDF
SILEESNWLYSQIASGTVPLFAKNGLFINKDDVTQFLELHHIQKLDIPFIAMYRKEECLS
LLKDPDQHEDNENSDDTDKTPTFKWHKVLWALQDLDRKWLLLQKRKSALNSYYNKRFEEE
SRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHFPPGEVGVDEGQYKRPM
RRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETPEEMASNFTCAMFE
SPQTVLKGARHMAAVEISCEPCVRRYVRFIFMDNAVVSTSPTADGNAAIDSFHQFAGVKW
LREKPIKMFEDAQWLLIQKAEEEKLLQVTVKLPQKVMDQLIEDCNGRYLSVGVSKYAQLW
NEQRSLILKDALFGFLLPSMEKEARSLLTSRAKNWLLYEYGKVLWNKVSVGPYQRKESDV
SMDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQQ
RVLKFMTDHQPHVVVLGAAHLSCTKLKDDIYEIIFKMVEENPRDVGHEMDELSIVYGDES
LPRLYENSRISSDQLPGQSGIVKRAVALGRCLQNPLAMVATLCGPAREILSWKLNPLENF
LTPDEKYSVIEQVMVDATNQVGLDVNLATSHEWLFAPLQFISGLGPRKAASLQRSLVRTG
AIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDVLDDTRIHPESYGLAQEL
AKVVYEKDSGDANDDDDALEMAIEYVRERPNLLKTFAFDLYFKDNKRDNKKETFKDIKME
LIQGFQDWRKQYKEPTQDEEFYMISGETEDTLAEGRLVQATVRRVVGGKAICALETGLTG
ILTKEDYADDWRDIPELSDKLREDDILTCKIKSIQKNRYQVFLVCKDSEMRSNRYRQVLN
LDPYYHEDQSSMRSEQEKVRKERELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDPGES
IIRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDCFEDLDE
VMDRYVDPLVGHLKSMLNYRKFRSGTKAEVDELLRIEKSQQPARIVYSFGISHEHPGTFI
LTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQKHIDDPLHESAPSIRSVAAMV
PMRSPATRGSSWGGSTDEDGWRGQSFDRDRSSGPGSRTGRNDYRSGGSRDGHQNGPPRPY
SGRGRGRGSYNSTRGNNSGNERQDSGYDKPRWDSGTKDNDEGWGSFPGAKVQNSPGREAF
PGGWGTGGGGGGGNGGWGHGNGGGTDSGNAGWGNTSLKRDSAQGGWVAGGGGSGGGDSVH
GTSGGGTDNGNSGWGNSSKKGGAQSGWGSGGSGGDAQGSGGVIDDGKWGTASKRDSTQSQ
ADNGWSGGGGGW
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaacgtggtttctgatgaagatgaggtggagttcgaagacgaagagagagag
cctgttgatggagatagaattgaccgccaccacgacgacgaggaggaggaggaggatgaa
gaagggcaggatgaatatgagaaggatgattttatagtggatgatgttgaggaagaagag
gaggcggatgaagaagaggagagggcagatagtgatgaagagaggcacaagaagaagaag
aaaaagaagaaaagagaagctgaggatgtccttgatgaagatgattacgagcttctgcgg
gacaacaatgtgtaccatcatcggccaaaggatagcaaaaaattcaagcgtttgaagaaa
gctcagagggattcagatgatgaccgatatgggctttctgatgatgagtttgatggaagc
ggcaaaggtgggcgaactgctgaggagaaactgaagcgcagcttatttggtgatgatgaa
ggcattccactcgaggatatgcctgaagaggaagagcaagaagaagtggaagaggatgga
gacattggtgatgaggacgagatggctgattttattgtggatgaagatgacgaagatgga
actttagtgagacgcaagaagctaaagaaaaagaaatctcggcaggcatctggagcttca
tcttctgctttgcaagaagctcaagaaatatttggtgatgttgatgaactcatacaaatg
cgcaagcaaggtttagaatctagtgaatggagagaaaggagattggaagatgaatttgaa
ccaactgtcatctctgaaaaatacatgactgagaaagatgatcggattcggatgattgat
attccagaaagaatgcaggtatccgaggaaagcactggtcctcctccattggatgatttc
agcatactggaggagagcaactggttatatagtcagattgcaagcggaacagtacctttg
tttgccaagaatggactgtttataaacaaggatgatgttacccaatttttggaattacat
cacattcagaagttagatatacccttcattgccatgtatcggaaagaggaatgtttaagc
ctgttgaaagatcccgatcaacatgaagacaatgaaaattctgatgacactgataaaact
cccacgttcaagtggcacaaggttctttgggctctccaggacttggacaggaagtggctg
ctacttcagaaacgaaagagtgccctcaattcatactacaataagcgctttgaagaagaa
tctcgacggatatatgatgaaacaagacttaatttaaatcagcagctgtttgagtcaatt
cttaaatcactgaagactgctgaatcagaaagagaggttgatgatgttgatgcaaaattt
aacctgcattttccaccaggtgaggttggggtggatgaaggacagtacaagaggcccatg
cggagatcacaatacagtatctgtagtaaggctggtctatgggaagttgcaagcaaattt
ggttacagtgccgagcaactgggaatgcagttatctttattaaagatggaggacgagttg
caggatgccaaggaaacaccagaggagatggcttcgaattttacatgtgcgatgttcgaa
agtccacaaacagttcttaaaggggctaggcacatggctgcagttgagataagttgtgag
ccctgtgtcaggagatatgtccgtttcatttttatggacaatgctgttgtgtctacaagt
ccaacggcagatgggaatgctgctattgattccttccatcagtttgcaggtgtcaagtgg
ttgcgtgaaaagccaatcaagatgtttgaggatgcacaatggctccttatccaaaaggct
gaagaggagaaacttcttcaagtcactgttaagcttccgcaaaaagttatggatcaattg
attgaggactgtaatggtcgctacttgagtgttggtgtcagtaaatatgctcaactgtgg
aatgagcaaaggagtttgatactcaaggatgcactctttggttttttgttaccttcgatg
gagaaagaggctagatccttgttgactagcagagctaaaaactggttgctttatgaatat
ggaaaggttctgtggaataaagtctctgtgggaccatatcaaaggaaagaaagtgatgtt
tccatggacgatgaagctgcacctagggtgatggcctgctgttggggtcctggaaaacca
gcaactacttttgtgatgttagattcatctggggaggttttagatgtgctttacactggg
tcacttacattaagatctcaaaatgttaatgatcagcaacgcaagaaaaatgatcagcaa
cgtgttctgaaatttatgacagaccaccaacctcatgtggtggttctgggagctgcacac
ttgtcttgtactaaactgaaagacgatatttatgagattatctttaaaatggtggaggaa
aatcctagagatgttggacatgagatggatgaactgagtattgtgtatggggacgagtct
ctccctcgtctttatgaaaattctcggatttcttctgatcaactacctgggcagtcaggc
attgttaaacgggctgttgctcttggccgttgtctgcaaaatcctttggctatggttgca
acactgtgtggtccagccagggagattttatcctggaaactaaaccctctggagaacttt
cttacccctgatgagaaatactcggtgattgaacaagttatggtagatgccacaaaccag
gtgggccttgatgttaatttggccacaagccatgaatggttatttgctcctttacaattc
atttctgggcttggacccagaaaggcagcatctttgcagagatctctggtaagaactgga
gcgattttcactcgcaaggacttcgttacagctcatggtcttggtaaaaaggtgtttgtc
aatgcagttggttttttgcgtgtccggaggagtggccttgctgctagcagcagccagttc
attgatgtgttagatgatacaaggatacatccagaatcctatggtctcgcacaggagttg
gcaaaagttgtttatgaaaaggacagtggtgatgcaaatgacgatgacgatgcattagag
atggcaatagaatatgttagagagcggcctaatttattgaaaacatttgcttttgacttg
tattttaaagacaataagcgggacaacaagaaggagactttcaaagatataaaaatggaa
ctgatacaaggtttccaggactggcgtaaacagtataaggaaccaacccaggacgaggaa
ttttatatgatttcaggtgaaactgaggatacccttgctgaagggagacttgtacaagcc
acggttcgcagggtggttggtggaaaggcaatatgtgcactggaaactggtctgactggg
attcttacaaaggaggactatgctgatgattggagggatatacctgagttgtctgacaag
ctgcgcgaagatgatatactgacttgcaagatcaaatcaattcaaaagaatagatatcaa
gtgttcttggtttgcaaagacagtgagatgagaagtaaccgatatcggcaggtactgaac
cttgatccctattatcatgaagaccaaagcagtatgaggagtgagcaagagaaggttcgc
aaagagagggagctcgcaaagaaacattttaagcctaggatgattgttcatccacgcttc
cagaatataactgctgatgaagccatggagttcttatccgacaaggatcccggagaaagt
attattcgtcctagttctcgtggaccttcgtatttaactttaactcttaaagtttatgat
ggagtttatgctcacaaagatatagttgaaggggggaaggaacacaaagatatcacaagt
ttacttcgtattgggaagacattgaaaataggggaggattgttttgaggatttggatgag
gtaatggaccgctatgttgatcccttggtgggccatctaaagtcaatgctaaattatcgc
aagttcagaagtggtactaaagcagaagttgatgagctcctaaggattgagaaatcacaa
cagcctgctaggatagtttattcgtttggcatttctcatgaacacccagggactttcatt
cttacttatataaggagtacaaatccacatcacgagtatgttggtctgtatcctaaggga
ttcaagtttcgaaagcgcatgtttgaggacattgaccggcttgtggcatattttcaaaag
catatagatgatcccttgcatgaatcagcaccatcaatcaggtcagttgctgccatggtc
ccaatgcgaagccctgcaacaaggggttcttcctggggtggttcaacggatgaagatggc
tggagagggcagtcttttgacagagatcgttcttctggtccaggttccaggacaggtcga
aatgattatagaagtggtggtagtcgagatggtcatcagaatgggccaccaagaccatat
agtgggcgaggacgtggtcgtggatcgtataacagcaccagaggaaataatagtggcaat
gagaggcaggattctggttatgacaagcccaggtgggattcaggtaccaaggataacgat
gaaggttggggcagtttcccaggtgccaaagtccaaaactctcctggcagggaagccttt
cctggtggctggggaactggtggtggaggtggtggtggaaatggtggctggggccatgga
aatggtggcggcactgatagtgggaatgctggctggggtaatactagcttgaaaagagat
tcagcacaagggggctgggttgctggtggaggtggaagtggtggtggtgactctgttcat
ggaactagtggtggaggcactgataatgggaattctgggtggggtaatagctctaaaaaa
ggtggggcacaaagtggctggggttctggtggaagtggcggcgatgcgcaaggaagtggt
ggagtcattgacgatgggaaatggggtacggcctctaagagagattctacacaatcacaa
gccgacaatggatggtcaggaggtggtggtggttggtga
DBGET
integrated database retrieval system
