Populus euphratica (Euphrates poplar): 105137414
Help
Entry
105137414 CDS
T05872
Name
(RefSeq) pre-mRNA-processing factor 19 homolog 2-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
peu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105137414
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105137414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105137414
04121 Ubiquitin system [BR:
peu04121
]
105137414
03400 DNA repair and recombination proteins [BR:
peu03400
]
105137414
Enzymes [BR:
peu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105137414
Spliceosome [BR:
peu03041
]
Complex B
Other components
Prp19 complex
105137414
Complex C
Prp19-CDC5 complex
105137414
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
U-box type E3
105137414
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
105137414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_like
U-box
Beta-prop_DCAF12
PAS_11
Beta-prop_DCAF4
WDR54
KNTC1_N
zf-Nse
B-prop_COPA_B_2nd
PUMA_CC
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
105137414
NCBI-ProteinID:
XP_011041438
UniProt:
A0AAJ6Y3R7
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MHCSISGEVPGEPVVSKRSGLLYEKRLIERHVSEYGKCPITGEPLTMDDVVPVETGKIVK
PRTVQTASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAQAERQIPMFTSEAVTANASVLSNGKRAAKDDDLGQPGKRVRPGISASIIT
ELTDCNAALSQQRKKRQVPPTWAPIDALERYTQLSSHPLHRTSKPGILSIDIQYSKDIIA
TGGADATAVIFDRSSGQIASALSGHSKKVTSVKFVAEGEFFLTGSADKTVRVWQGSEDGN
YDCRHILKDHTAEVQAVTVHSTNNYFVTASLDNTWCFYDLSSGLCLTQVADTSKTDGYTS
AAFHPDGLILGTGTSEAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLATAAHDSV
KLWDLRKLKNFRTLNLYDSDTPTNSVEFDHSGSYLGISGSDIRVYQVGSVKAEWNCIKTL
PDLSGTGRATCVKFGPESKYIAVGSMDHNLRIFGLPEDEAPLES
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcattgctcaatttccggcgaggttccgggagagcccgtcgtctcgaagaggtctggg
cttttatacgagaaacgcttaatcgagagacacgtatcggaatatggaaaatgccccatt
actggggaaccgcttaccatggatgatgttgttccagtcgaaacaggaaaaattgtgaag
ccgagaactgtacagaccgcaagcatccctgggatgcttggaatgtttcagaatgaatgg
gatggcctaatgttgtccaactttgcactggagcagcaattacatacagctaggcaagag
ctaagtcatgcattataccagcatgatgctgcttgccgtgtgattgcaagacttaaaaag
gaaagagatgaagcaaggtcattgcttgcgcaagcagagaggcagatacccatgtttaca
tcagaagctgttacagcaaatgcttcagttcttagcaatggaaaacgagctgccaaggat
gatgatttgggccaacctgggaagagagtacgacctggaatttctgctagcatcattact
gagcttacagactgtaatgcagctctttcgcaacagcggaaaaagcggcaggttcctcca
acatgggctcctattgatgctctagagaggtacactcaactttctagccatccacttcac
agaactagcaagccgggcatcttatctatcgatatacaatattcgaaggatatcattgct
actggcggggctgatgcaactgctgtcatctttgatcggtcttcagggcagattgcatct
gcacttagtggtcactcaaagaaggtaacaagtgtgaaatttgtggctgagggtgaattt
ttcttaactggatcagcagataagacagttcgagtgtggcaaggatctgaagatgggaac
tatgattgtagacacatcctgaaggatcatactgcagaggttcaagctgtcactgttcat
tccacgaataattacttcgtgactgcttctcttgacaatacatggtgtttctatgatctc
tcctctggtttatgcttgactcaggttgctgacacctccaaaactgatggctatacatct
gctgcctttcatcctgatggtctcatccttggaacaggaacttcagaagcagttgttaaa
atttgggatgtaaaaagtcaggcaaatgttgcaaaatttgaaggccatgttggaccagtg
acagcaatatctttctctgaaaatggatactttctggctactgctgcccatgatagtgtt
aagctgtgggatctgaggaaattgaaaaacttccggacgctcaatctctatgattctgac
acacctacaaactctgtggagttcgaccacagtggatcttaccttggaatttcaggatca
gatataagagtttaccaagttggcagtgttaaagcagagtggaattgtatcaaaactctt
cctgatttgtctggcacagggagagcaacttgtgtaaaatttggccctgaatcaaagtac
atagctgtgggatctatggatcacaacctccggatatttggcttgcctgaggatgaagct
ccattggaatcataa
DBGET
integrated database retrieval system
