Populus euphratica (Euphrates poplar): 105137427
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Entry
105137427 CDS
T05872
Name
(RefSeq) pre-mRNA-processing factor 17-like isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105137427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105137427
Spliceosome [BR:
peu03041
]
Complex C
Other components
Step II factors
105137427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_IFT140_1st
PAN2_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
105137427
NCBI-ProteinID:
XP_011041458
UniProt:
A0AAJ6V5A1
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MDLLQNYQNDGELDQNTNSSPDASPPRLLPSKSAAPKVDDTMLALTAAYQMLSKPIDPVQ
HVVAFNPTYDQLWAPVLGPAHPYAKDGIAQGMRNHKLGFVEDAAIDSFVFDEQYNTFHKY
GYAADPSASEGNNYIGDLDVLETNNGISVYNIPQHEQKKRKIEKKTEAVEDEDDGMDKEE
VENPATDAWLMKNRKSPWAGKKEGLQTELTEEQKKYAEEHARKKEEKAGGEKGELVADKT
TFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLIL
SAGIDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGYDKNIKYWDTETGQ
VISSFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTIT
FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNMNWLAAQSLDNQI
LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRT
LKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccaaaactaccaaaacgacggagaattagaccaaaacactaattcctct
ccggatgcatcccctccacgtctcctcccttccaaatccgccgctcccaaggtggacgac
accatgctagccctaacagcagcctatcaaatgctctctaaacctatcgaccccgtacag
cacgtcgtcgctttcaaccctacctacgaccagctgtgggctccggttttaggccccgcc
catccctacgccaaggacggcattgcccagggcatgcgcaaccacaagctcggcttcgtc
gaggacgccgccattgattccttcgtcttcgacgagcagtacaacactttccacaagtat
ggctacgcggctgacccctctgcttctgaaggtaataattatattggtgatttggatgtt
ttagaaacaaataatgggatttctgtttataatattccgcaacacgaacaaaagaagcga
aagattgagaagaaaacggaagctgttgaggatgaagatgatggaatggacaaggaagag
gttgagaatccggctacggatgcgtggttgatgaagaataggaagagcccttgggctggt
aagaaggaggggttacaaactgagttgactgaagagcagaaaaaatatgcggaagagcac
gcgaggaagaaggaggagaaagctggtggtgaaaaaggtgagcttgttgctgataagact
acttttcatggtaaagaagagagggattatcaagggaggtcgtggattgcgccacctaaa
gatgctaaagctagtaatgatcattgttatatacccaagagattggtgcatacatggagt
ggccatactaaaggagtttctgctataaggtttttccctaaacatggccatttgatactt
tctgcgggtattgatacgaaggtgaagatatgggatgtgtttaattcgggaaagtgtatg
agaacttatatgggtcattctaaggctgtcagggatatttcattttgtaacgatggctcc
aagtttttaactgctggttatgataagaatattaagtactgggacacagagacgggccag
gttatctcttcgttttcgactgggaagattccatatgttgttaagctcaatcctgatgat
gataagcagaatatattgttggcgggtatgagtgataagaagattgtgcagtgggatatg
aacacagggcagattactcaggagtatgaccagcatttgggggcagtgaataccatcaca
tttgtggataataacaggagatttgttacttcaagtgatgataaatcactccgtgtatgg
gaatttgggatccctgttgttattaagtatattagtgagcctcacatgcattctatgcca
tcgatctctcttcatcccaatatgaattggcttgctgcgcagagtttggataaccagatc
cttatttatagtaccagggaaagattccagttgaataagaagaagaggttcgctggtcac
attgtggctggttatgcttgtcaagtcaatttctcaccggatggaagatttgtaatgtca
ggagatggtgagggtaaatgctggttttgggactggaagagttgtaaagttttcaggacc
ctcaaatgtcacgagggagtctgcattggggctgagtggcatccgctggagcaaagtaaa
gtggccacttgtggctgggatggattgatcaaatactgggactag
DBGET
integrated database retrieval system
