Populus euphratica (Euphrates poplar): 105138063
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Entry
105138063 CDS
T05872
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
peu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105138063
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105138063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105138063
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105138063
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
105138063
NCBI-ProteinID:
XP_011042356
UniProt:
A0AAJ6Y4U6
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Position
Unknown
AA seq
639 aa
AA seq
DB search
MDYEEEEKMQYQGSGAIPALVEEELGEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG
NGGFQTRNAHESRVETGGSQVLTISGAGVAVEGKYSNAGAPFPEQKQAAIGVEANDVGSI
GYGDGSSVAQKGRFIEMGHDVHVRNMGFQKPASVPPGTGVDPSDMSRKIAKEPETLPNTG
SSGPRGVPQMQVNQMNMNADANRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVA
SQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQT
LKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGDGGRNYGRGGWGRGGQGVL
NRGPGGGPMRGRGGMGPKNMAGNVAGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMG
AGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGM
MASSGMEGPNPGKWPDTSMGGWGEEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGA
SREKERVSERDWSGNSDRRHRDEREQDWDRSEREHKYREEKDTYRGHRQRERDSGYEDDR
DRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggattacgaagaagaggagaagatgcaatatcagggaagcggtgccatacctgcactt
gtagaggaagagttgggagaagatgacgagtatgatgatctatataatgatgtcaatgtt
ggggagaatttcttgcagatgcatggctctgaagcgccagccccacctgctacagcaggg
aacggaggattccagactcgaaatgctcacgaatcaagagttgaaaccgggggttcacag
gtgcttactatctctggggctggggttgcagttgaagggaaatattctaatgctggggct
ccttttccagagcagaagcaggcagcgattggcgtcgaagcaaacgatgtagggtccatt
ggttatggtgatggatcttctgttgctcagaaagggaggtttattgagatgggtcatgat
gttcatgtcaggaacatgggatttcaaaaaccagcatcagtgcctcctggtacaggggtc
gatccttctgatatgagtagaaaaattgctaaagagcctgaaactttgccaaatactggc
agttctggtcctcgaggtgttccacagatgcaagttaatcaaatgaatatgaatgcagat
gctaatcgcccggtggttaatgaaaatcaggtccggccacctatagagaatggtccaacc
actctttatgtgggagaattacattggtggaccactgacgcagagcttgagagtgttgca
tctcaatatgggagggtgaaagagattaaattctttgatgagagggctagtggtaagtct
aaaggctattgccaagttgacttctatgaagctgctgctgcagctgcatgcaaagaggga
atgaatgagcatgttttcaatggacgaccttgtgttgtggcctttgcttctgcacaaaca
ctcaagcagatgggggcttcttacatgagcaaaacccagggtcagccccagccccagtct
cagggaagggggtctatgaatgatggtatgggaagaggcggtaatgcgaattatcaaagt
ggagatggaggaaggaactatggaagaggtgggtggggaaggggtgggcagggagttctc
aaccggggacctgggggtggaccaatgaggggaagaggtggcatgggtcccaagaatatg
gctgggaatgttgctggagttggaagcggtgctaatggtggagggtatggacaaggaatt
gcaggtcctgcatttggtggacctgctggtggaatgatgcatcaccagggtatgatgggt
gctggatttgatccattatatatggggcgagggggtggttatgggggttttgctggccct
ggttttcctggcatgcttccttcatttcctgctgttaattcaatgggacttgctggggtg
gctcctcatgtcaacccggctttctttgcccgaggaatggcacctaatgggatgggaatg
atggcctcctctggaatggaagggccgaatccaggaaagtggcctgacacaagcatggga
ggatggggagaagagcctggtcgaaggacaagggagtcaagctatgatggtgacgagggt
gcttctgaatatggatatggagaggggaatcatgaaaagggagctcggtcaagtggcgcc
tctagagaaaaagaacgggtttctgagcgtgactggtcgggtaattctgacaggcggcac
cgtgatgagagggaacaggactgggacagatctgaaagggagcacaagtacagggaagag
aaagatacttaccgtggacatcgtcaaagagagcgtgactcgggttatgaggatgatcgg
gatagagggcactcttcttcaagagctcggagcaggtcccgtgcggctccagaagaagat
tacaggtctcgatcaagggatgtagactatggcaaaaggaggcgcccgccatcagagtga
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