KEGG   Populus euphratica (Euphrates poplar): 105138652
Entry
105138652         CDS       T05872                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105138652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:peu03041]
    105138652
   03036 Chromosome and associated proteins [BR:peu03036]
    105138652
Spliceosome [BR:peu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105138652
 Complex B
    105138652
 Complex C
   U2 SnRNP specific factors
    105138652
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    105138652
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N Htt_N-HEAT_1 HEAT_2 HEAT_ECM29 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 105138652
NCBI-ProteinID: XP_011043105
UniProt: A0AAJ6V885
LinkDB
Position
Unknown
AA seq 1267 aa
MDPEIAKTQEERKKMEQQLASLTSLTFDRDLYGGVDRDAYETSIPATDDEEPDVGLNEVA
QKLASYTAPKSVLKEMPRGGDDSEEANGFRKPSRIIDREDDYRRRRLDRIISPERHDPFS
AGEKTPDPSVRTYSDIMKEESLKRQKEELLREIAKKKKEEEEARAEKGDKGEKEANSMAK
RRNRWDQSTEDGGNAAKKAKTGSDWDLPDATPGIGRWDATPTPGRIGDATPAAGRKNRWD
ETPTPGRVVDSDATPAGGVTPGATPAGVTWDSTPKGMVTPTPKRQKSRWDETPASMESAT
PALGGVTPSLGGATPGPTPLGAIDMATPTPNALAMRGAITPEQYNLLRWEKDIEERNRPL
TDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYSIPDENRGQQFDLGQ
EPPAGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQ
LTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVI
EPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASA
LGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDEN
QKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMD
AMYANYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRSDILPEFFKNF
WVRRMALDRRNYRQLVETTVEIANKVGVKDIVGRIVEDLKDESEPYRRMVMETIEKVVTN
MGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIK
WRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGAL
KAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMR
ICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIA
IVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDAL
MDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGM
RVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPILDDEQNNIYSR
PELMMFV
NT seq 3804 nt   +upstreamnt  +downstreamnt
atggaccccgaaatcgccaaaacccaagaagagcgcaagaaaatggaacaacaacttgcc
tctttaacctctttaaccttcgatcgtgacttgtatggtggagtcgaccgtgatgcttat
gaaacatcgatcccagctaccgatgatgaagaacccgacgtgggtcttaacgaggttgct
cagaaactagcttcttatactgccccgaaatcagttcttaaagaaatgcctcgtggcggt
gatgatagtgaagaggctaatgggtttaggaagccgtcgaggattattgatcgtgaggat
gattacaggaggaggagattggataggattatttcgcccgagaggcacgatcctttttct
gccggcgagaaaacgccggatcccagtgtgaggacttattcggatatcatgaaggaagag
tctttgaaaaggcaaaaggaggaacttctaagggaaatcgccaagaagaagaaggaagaa
gaggaagcgagggctgagaaaggtgacaagggtgaaaaggaggcgaattcgatggctaag
aggaggaacaggtgggaccaatcgacggaggatggtggaaatgcagctaaaaaggcgaag
acgggttcggattgggatttacctgatgctacaccggggattgggaggtgggatgcgaca
cctactccagggaggataggggatgcgacgccagctgctgggaggaagaataggtgggat
gagactcctacaccggggagagtggttgattcagatgccactcctgcgggtggggttaca
ccaggggcgactcctgctggtgttacttgggattctactcccaaaggaatggttacacct
acaccaaaaaggcaaaagtctcgttgggatgagactccagctagtatggagagtgcaact
cctgctcttgggggggttactcctagtctaggtggtgcgactcctggacctactcctctt
ggtgcaattgatatggctactccaactccgaatgcacttgccatgcgcggggcaataacg
cctgagcagtataatctgctgaggtgggagaaggatattgaggagaggaataggccattg
actgatgaggagttggatgctatgtttcctcaagaagggtacaagattttggagccacca
gcttcttatgtgcctattaggacaccagcaaggaagttgttggctaccccaacaccaatg
ggcactcctctttattctattcctgatgagaacagagggcaacagtttgatctagggcag
gagcctcctgctgggttgccatttatgaaacctgaggattatcagtattttggtgctttg
ttgaatgaggaagatgaggaggagttgtccccagaggagcagaaagagaggaagattatg
aaactgctacttaaagtgaaaaatgggacacctccacagaggaagactgctttaaggcaa
ttgactgataaggctagagagtttggcgctgggccattgtttaacagaattttaccgctg
cttatgcagcctaccttggaggatcaggaaaggcatcttctggttaaggtgattgatagg
gttttgtataaattggatgagttagttaggccttatgttcataagattcttgttgttatt
gaaccactcttgattgatgaggattattatgcccgtgtggaggggagagaaattatttct
aatttgagtaaagcagctggtttggccactatgattgctgctatgcgtcctgatattgat
aatattgatgagtatgttaggaacacaactgcaagagctttcagtgttgttgcttctgct
ctcgggattcctgcactgttgcccttcttgaaagctgtgtgccagagtaagaaatcttgg
caagctcgccacactggaatcaaaattgttcaacagattgctattttgattggctgtgct
gttcttccccatttgaggtctcttgtggaaatcatagaacatggtctgaatgatgagaat
cagaaggtgaggactatcactgccttgtccttggctgctcttgctgaggctgctgcccca
tatggcattgaaagctttgattctgttctgaagccattgtggaagggcattaggtcacac
cgtggcaaggtcttggctgccttcttgaaagcaattggttttattattcctctcatggat
gctatgtatgccaattactacaccaaggaagtcatgtttattctgatacgtgagtttcaa
tcacctgatgaagaaatgaagaagattgtgttgaaggtggttaagcaatgtgtgagtaca
gagggtgtggaagctgaatacatacgttctgatattctacctgagttctttaagaacttc
tgggttagaagaatggcgttggataggagaaattacaggcaacttgtagaaacgactgtt
gagattgctaacaaggttggtgttaaagatattgttggcagaattgttgaggatctgaaa
gatgagagtgaaccttacaggcgaatggtcatggaaacgattgagaaggttgtgacgaac
atgggttcatctgatatcgatgctaggttggaagagcttttgattgatggtattctctat
gctttccaagagcagaccagtgatgatgctaatgtgatgcttaatgggtttggtgcagtt
gtcaattctcttggacagagggtgaaaccttaccttccccagatttgtggaaccattaag
tggcgcttgaacaacaagagtgctaaagtgagacagcaagctgctgatcttatatctaga
attgctgttgtcatgaagcagtgccaggaagaacaactgatgggccatcttggtgtagtg
ttgtacgagtatttgggagaagaataccctgaagttcttggatcgattctaggagctctc
aaagcaattgtcaatgtcattggtatgaccaaaatgactcctcctattaaggacttgctt
ccaagattaacaccaattctgaagaataggcatgagaaagtccaggaaaactgtattgat
cttgttggtcgtattgctgatcgtggagctgagtttgttcctgccagggagtggatgagg
atttgttttgagcttcttgagatgcttaaggcccacaagaagggtattcggcgtgctact
gttaacacttttggttacattgctaaggccattgggcctcaggatgttttggctacatta
ttaaataacctcaaggtccaggagcgccaaaatcgtgtttgcacaactgttgccattgct
atagttgcagaaacctgttcaccttttacagtcttgcctgccttgatgaatgaatatcgt
gtcccggagcttaatgtgcagaatggtgtcttgaaatccctctcattcctgtttgagtac
attggcgaaatgggtaaagactatatctatgcagtgactccattacttgaggatgccctc
atggacagagatctagttcacaggcagactgcagcttccgctgttaagcatatggctttg
ggtgtggctggtttgggttgcgaggatgcattggtccacttgcttaactatgtttggccc
aacatttttgagacgtcccctcatgtgataaatgctgtcatggaagccattgaaggaatg
agggtggccttaggcgctgctgttgtgttgaattactgtctccaggggctgttccatcct
gcccggaaggtcagggaagtatactggaagatctacaattctctgtatattggatctcag
gatgcccttgtggcagcttatcctatactggacgatgagcagaataacatatatagtaga
cccgagttgatgatgtttgtttaa

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