Populus euphratica (Euphrates poplar): 105138757
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Entry
105138757 CDS
T05872
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105138757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105138757
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105138757
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105138757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
ScoMcrA_N
Motif
Other DBs
NCBI-GeneID:
105138757
NCBI-ProteinID:
XP_011043248
UniProt:
A0AAJ6V7H1
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MEDSNDIVIREVWSYNLESEFELIRKLIIEFPYISMDTEFPGVVFRPPVDPTNNRNYFQQ
VKPLDHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFKDFDVERDAHAP
ASIELLRRQGIDFGRNREEGVDSARFAGLMMSSGLVCNESVSWVTFHSAYDFGYLVKILT
GRDLPSGLMEFLKVLRVFFGNKIYDVKHMMRFCKSLYGGLDHVARTLDVNRAVGKCHQAG
SDSLLTWHAFQKMRDVFFVKDGPEQHAGVLYGLEVLC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaagatagcaacgacattgtaattcgtgaagtttggtcgtataatttggagtcggaa
ttcgagctgattcgtaaattaatcatcgagttcccgtatatatcaatggacaccgagttt
cctggtgttgttttccgaccaccagtggaccccaccaataacaggaattatttccaacag
gtgaagccattggatcattacaagatccttaaatccaacgttgatgctttaaatcttatt
caggtgggtctcacgctttccgatgcagaggggaacttgcccgatctgggaactggaaac
cggtttatctgggagttcaatttcaaggattttgatgtggagcgtgatgctcacgctccg
gcctcgattgagttgctgaggcgacaagggattgattttgggaggaatagagaggagggg
gttgactcggcgaggtttgctgggctgatgatgtcgtctgggcttgtctgcaacgagtcg
gtgagttgggttactttccatagcgcatatgattttgggtacttggtgaagattctcacg
ggccgggacttgccgtctgggttgatggaattcttgaaggtgttgagggtgttttttgga
aataaaatttatgatgtcaagcacatgatgcggttttgtaagagtttgtatggtgggttg
gaccatgtagccaggacactagatgtaaaccgggcggttgggaaatgtcaccaggctggt
tcggatagtttgctgacatggcatgcttttcaaaagatgagggatgtgttttttgtgaaa
gatggaccggaacaacatgctggtgttttgtatggattagaggtgctttgctaa
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