Populus euphratica (Euphrates poplar): 105138788
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Entry
105138788 CDS
T05872
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105138788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105138788
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105138788
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
105138788
NCBI-ProteinID:
XP_011043308
UniProt:
A0AAJ6V7K9
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MDSNPKMRKEFLDSTRSSPFPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVF
IGNCYSVSPEIVARRFPRIKSVTLKGKPRFSDFNLVPENWGADVHPWLVVFAAKYPFMEE
LRLKRMAVSDESLEFLALNFPNFKVLSLLSCDGFSTDGLAAIATHCKNLTQLDIQENGID
DKSGHWLSCFPENFTSLEVLNFANLNTDVNFDALERLVNRCKSLKVLKANKSISLEHLQR
LLVCAPQLTELGTGSFMPELTACQYAELRSSFNQLKNLNTLSGLWEATAPYLPVLYPACT
NLTFLNLSYAFLQSTELASLLCQCPRLRCLWVLDTVGDKGLEAVGSNCPLLEELRVFPAD
PFDEEVIHGVTEAGFLAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNP
GQPDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFQYIGQYAKNLETLSVAFAGSS
DRGMQCMLEGCPKLRKLEIRDCPFGNVALLSGLEKYESMRSLWMSACNVTMNGCRLLARE
MPRLNVEVMKEDGSDDSQADKVYVYRSVVGPRRDAPPCVLTLSGL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaatccaaagatgagaaaggaatttcttgactcaacaagatcatctccattt
ccagatgaagtactggaacgagttctttcactcttgaaatcacacaaagatcgtagcgca
gtctctttagtatgcaaggattggtacaacgcagagagctggtcaagaactcatgttttt
ataggaaactgttattcagtctctcctgaaattgttgcacgtagattcccaagaattaag
agtgtgactctcaaagggaagccgagattttctgattttaatctggtccctgaaaactgg
ggagctgatgttcatccttggcttgtagtttttgcagcaaagtatccgtttatggaagag
ttaaggcttaagagaatggctgttagcgatgaaagtttggagtttttggctcttaatttt
cctaatttcaaggttctttctcttttgagctgtgatgggtttagtactgatgggcttgct
gctattgccactcattgcaagaatttgactcagcttgatatacaagagaatggcattgat
gacaagagtggccactggttaagctgcttccctgaaaacttcacatcattggaagtacta
aactttgccaacttgaacactgatgtcaattttgatgcacttgagaggcttgtaaatcgg
tgcaaatcactgaaggttctgaaggccaacaaaagtatttccttggaacacctgcaaagg
ctgctggtttgtgctccacagttaacagaacttggtactggttcattcatgccagagctt
acagcttgccagtatgctgagcttcgaagttcatttaaccagttgaagaatttaaatacc
ctttctggtttatgggaggcaacagcaccatacttaccagttctctatcctgcctgtaca
aacttgactttcttaaacttgagctatgcttttctgcaaagtactgaacttgcgagtctt
ctttgtcaatgtccacgtcttcgatgcctctgggtcttggacactgtgggggacaaaggt
ttggaggctgttggatctaactgtccattgcttgaggagctccgtgtcttccctgcagat
ccctttgatgaggaagttatccatggggtgactgaagctgggtttcttgctgtgtcttac
ggatgtcggagactccactatgttctctacttttgcaggcagatgactaatgctgcagta
gccaccattgtgcagaactgccctgatttcacccacttccgtctctgcataatgaatcca
ggccaaccagattacttgacaaatgaacccatggatgaagcttttggggcggtagtgagg
acatgcactaaactacagaggctttctgtttcaggtctcttgactgacctgacattccag
tatattgggcagtatgccaaaaatctggaaactctgtcagtggcttttgctggcagtagt
gatagggggatgcagtgcatgctggaaggttgtccaaagttgaggaaacttgagataagg
gactgcccatttggaaatgtagcacttctttcaggtttggagaaatacgagtcaatgagg
tcactttggatgtcagcctgcaatgtgacaatgaatggctgtcggctattggcaagggag
atgcccagattgaatgtagaggtaatgaaagaggatgggagtgatgattctcaggctgat
aaagtttatgtttatcgttctgttgtgggaccaagaagagatgccccaccttgtgtactg
actctctcaggtttataa
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