Populus euphratica (Euphrates poplar): 105138960
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Entry
105138960 CDS
T05872
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105138960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peu03032
]
105138960
Enzymes [BR:
peu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105138960
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
105138960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
DUF1744
TAF4
CENP-N
Motif
Other DBs
NCBI-GeneID:
105138960
NCBI-ProteinID:
XP_011043524
UniProt:
A0AAJ6Y653
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MADEQPEVLNGKRRRGAEATARSEALERLKALRRGGRRSENGGGYAIKMEDPIYDSVPED
EYNSLVARRREEAQGFIVDDNGLGYGDEGEEEDWSQAGLPPSSDESDGEGLNKSRSRKKK
SEKKEKEKEKEKDVKKGNASLTAAAAAIMGKTKISAMFTSNVFKNRDSVGKAKSFDCDNI
VDDVIAEFAPDEADRERRRRGQLIMKNATPIKSENRFFDNGNDVNFMAKAELDRDFINYK
SGVDEKKEGIVEVKEKGEDKLSNPVKQEVVSVLEVKADEAVVKKDGGRTLNAKISHEERD
PALSATAGWKEVMSGKNGGEAVGGAGVVEEVKSGANCEEQSEFELDGDGSLPFYILDAYE
EIFGANMGTIFLFGKVKAGNTYHSCCVVVKNMHRCVYAIPNSSTFHTDEISMLEKEVEES
RISSTDFHKKLQDMAYELKNEVASQLLSLNVSSFSMAPVKRRYAFERSDIPAGENYALKI
NYPFKEPPLPADLKGETFCALLGTHCSALELFLVKRKVKGPSWLSVSKFATCPASQKVSW
CKFEIIVESPKDIQVSSSSNSKIEIPPVVVAAINLKTVINEKQNVNEIVSASVICCHKAK
IDTPMLASEWKKPGMLSHFTVVRKLDGGIFPMGFSKEVTDRNTIAGSNVLAIESSERALL
NRLMIALHKLDSDFLVGHNISGFDLDVLLHRTQACRVPSSTWSKIGRLKRSVMPKLTKGN
AIFGSGASPGILSCIAGRLLCDTYLASRDLLKEVSYSLTQLAKTRLNKDRKEIAPHDIPT
MFQTSKSLIELVEYGETDAWLSMELMFHLSILPLTRQLTNISGNLWGKTLQGARAQRVEY
LLLHAFHAKKYIVPDKMSSRVKEAKMTKRRINNGIEERNADEFDTDAAYFENDNKQSDHG
KRKKGPAYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSMDGLVPRLP
SSKTTGVLPELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTANSMYGCLGFSNS
RFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIPKAKAIAGK
VIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDMVRRDWS
LLSKELGDFCLAQILSGGSCEDVIESIHNSLMKVQEDMRSGQVALEKYVITKTLTKPPEA
YPDAKNQPHVLVALRLKQSGYTAGCSAGDTVPYIICCEQGAGASAVSLTGIAQRARHPDE
LKCDDGKWIIDIEYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQSKSSESVPS
SSLLFAADDEERYQSCEPLILSCPSCSGTFHCPPVFTSICTSILEKSKNPQIEESISNFW
HRLCCPKCPAEGDLGRISPAIMANQVKRQAEGFVSTYYKGVMMCDDETCKHTTRSVNLRL
VGDSERGTVCPSYPRCNGRLVRKYTEADLYKQLSYFCHLLDTACCIEKLQADAGTRILVE
KALMKIRPVVDMALSTVKKMRDRCAYGWVQLDGLAVTV
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagcagccagaagtgttaaatgggaagcgaagaagaggagcagaagccacc
gccagatccgaagcccttgagcgactcaaagcgctccgtcgtggtggcaggagatctgaa
aatggcggcgggtacgccatcaaaatggaagatccaatctatgattccgtccccgaggac
gagtataacagtctcgttgctcgccgccgcgaggaagctcagggtttcatcgttgacgat
aacggcctgggttacggggacgaaggtgaagaagaggactggtctcaggccggattacct
ccgtcgtcggatgaatcggacggcgagggtttgaataagagtagatctagaaagaagaaa
agtgaaaagaaagagaaagagaaagagaaagagaaagatgtgaagaaaggtaatgcttcg
ttgacggctgctgcggcggcgattatggggaaaacgaagatatcggctatgtttacatca
aatgtttttaaaaatagggattctgttggtaaggcaaagagttttgattgtgacaatatt
gttgatgatgttatcgcggagtttgcacctgatgaagctgatagagaaaggcgtagaaga
ggacagttgattatgaagaatgctacaccaattaagagtgaaaatcgattttttgataac
ggtaatgatgttaattttatggctaaagctgaattggatagggattttattaattataag
agtggtgttgatgagaaaaaggagggaattgtggaagtgaaagagaagggagaggataaa
ttgtctaatccggttaaacaggaggttgtaagtgttttggaagtgaaagcagacgaggca
gttgtgaagaaggatggtggacgtacacttaatgcgaagattagtcatgaggagagggat
ccagctttgagtgcgacagccgggtggaaggaggtgatgagtggtaagaatgggggtgag
gctgttggtggcgctggggtagtggaggaggttaaaagtggagcaaattgtgaggagcaa
tctgagtttgagctggatggtgatgggtcattacccttctacattcttgatgcttatgaa
gagatttttggtgcgaacatgggcacgatctttttgtttgggaaggtgaaagccggaaat
acatatcatagttgctgtgtggttgtaaagaatatgcacagatgtgtttatgcaattcca
aatagttctacatttcatactgatgagataagcatgctagagaaagaggttgaagagtca
cggatttcttccacggatttccataaaaagctgcaagacatggcatatgaactaaagaat
gaagttgcaagccaattgttaagtctcaatgtttcaagtttcagcatggctccggttaag
aggagatatgcatttgagcgctctgatataccagctggagagaattatgcactcaagatc
aactatccatttaaggaacctccgctcccagcagatctgaaaggggaaactttctgtgct
ttgctaggaactcattgcagtgctttagagctttttctcgttaaaaggaaggtaaaggga
ccttcgtggctttcagtttcaaaatttgcaacttgcccagcttctcaaaaggtgagctgg
tgcaagtttgagatcattgtcgaatctccaaaggacatacaagtttcttcttcttcaaat
agcaaaatagagattcctccagtggttgttgctgcaataaatctgaaaactgtcataaat
gaaaagcagaatgtgaatgaaatagtctctgcttctgtcatctgctgtcacaaggccaag
attgacactcccatgttggcctccgagtggaagaaacctggcatgctgagccattttact
gttgttcgcaagcttgatggagggatattcccaatgggattttccaaagaggttacagac
agaaacacaattgctggatcaaatgtcttagctattgaaagcagtgaaagagctttgtta
aatcgtctgatgattgcattacacaagttagatagtgattttcttgttggacataatata
tctggttttgacctggatgttctcctacataggacacaggcttgccgggtgccaagtagc
acatggtccaaaataggacgtctcaagcgttctgtgatgcctaaacttacaaaaggaaat
gccattttcggctctggagcaagtccagggatcctgtcttgcattgctggccggctttta
tgtgatacatatttggcttcccgtgatttattaaaagaggttagttattccttgacacaa
cttgctaagactcggctgaacaaagaccgcaaggagattgcaccacatgatattcccaca
atgttccagacatcaaagtcccttattgaactagttgaatatggtgagacagatgcatgg
ttatctatggaactcatgtttcatttgagcattcttcctctcacacgccagctgaccaat
atcagtgggaatctctgggggaaaactcttcaaggtgccagggcacaaagagtagagtat
cttctattgcatgcattccatgcaaagaaatatattgtcccagacaagatgtcttctcgt
gtaaaggaagcaaaaatgacaaagaggagaattaataatggcattgaggagagaaatgct
gatgagtttgacactgatgctgcctatttcgaaaatgacaataaacagagtgatcatggg
aaaagaaaaaaaggtcctgcctatgcaggtggattggttttggagcctaaaaaaggttta
tatgacaaatatgtattgcttctggatttcaatagtctttacccctcaattattcaggaa
tacaatatctgcttcacaacagttgaaaggtctatggatggattggttcctcgtttacct
tccagtaaaacaactggagttctgcctgagttgctgaaaaatttagttgagagaagaaga
atggtgaagtcatggatgaagaatgcatctggtctcaaagtccagcagcttgacattcag
caacaagcgctaaagcttactgcaaatagtatgtatggatgccttgggttttccaattca
agattctatgcaaagccacttgcagaactaataactctacaaggaagggagattttacaa
agtactgttgatcttgttcagaataatttgaacttggaggtgatctatggtgatacagat
tcaattatgatttatagtggactagatgatattccaaaagcaaaagctattgcagggaaa
gtcatccaggaggttaacaagaagtacaggtgtctagaaattgatcttgatggcttgtac
aaaagaatgcttcttcttaagaagaagaaatatgcagctgttaaggtgcaattcaaggat
gggacaccatatgaggttattgaacgtaaaggtcttgacatggttcgtcgtgactggagc
ttgctatcaaaggaattgggagatttctgcctggctcaaattttgtctggagggtcatgt
gaggacgtaattgaatcaatacataactccctcatgaaggtccaggaagatatgaggagt
ggacaagtagcccttgagaaatatgtcatcacaaagacattgactaaaccacctgaagcc
tatcctgatgccaaaaatcaacctcatgttctggtagcactaaggttgaagcaaagtggc
tatacagctggttgctctgctggtgatacagtaccgtatataatttgctgcgagcagggt
gcgggtgcttctgcagtaagtttaacagggatagcccagcgtgcaagacatcctgatgaa
ttgaaatgtgatgatggaaaatggattatagacattgagtactatttgtcacagcaaatt
catcctgtggtatcacgtttatgtgcttcaatccagggtacaagcccagagcgtttggct
gattgcttggggcttgactcatccaagttccaaagtaaatcaagtgaatctgtcccttct
agctcactcctgtttgctgctgatgatgaggaaagatatcagagttgtgagccgctaatc
ttgtcatgtcccagctgctctggtacttttcactgtcctcctgtcttcacttccatttgt
acgtcaattcttgagaaatcaaaaaacccacaaatcgaagaatctatatccaatttctgg
catagattgtgttgccctaaatgcccagcggaaggtgacttgggcagaatatctcctgca
attatggccaatcaggtcaaaaggcaagcagaggggtttgtttccacatactataaaggc
gtcatgatgtgtgatgatgaaacttgtaagcataccactaggagtgtcaacctgaggctg
gttggtgattccgagagaggaacagtttgtccaagctatccacgctgcaatgggcgtcta
gtgagaaagtacacggaagcagatttgtacaagcaactgtcgtatttctgtcacttgctc
gacactgcttgctgcattgaaaagttgcaggcggacgcaggcactagaatactggtagaa
aaggcgctgatgaaaatccggccagtggtcgatatggcactttcaacagttaaaaagatg
agggacagatgcgcttatgggtgggtgcagttggatggccttgcagtcacagtataa
DBGET
integrated database retrieval system
