Populus euphratica (Euphrates poplar): 105139077
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Entry
105139077 CDS
T05872
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105139077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105139077
Spliceosome [BR:
peu03041
]
Common components
Common spliceosomal components
SR proteins
105139077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
105139077
NCBI-ProteinID:
XP_011043695
UniProt:
A0AAJ6V8S1
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MELVERGSHGGLLSCKGFAIFFRYKKMSGRFSRTIYVGNLPADIRESKVEDLFYKYGRIL
DVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGSRLRVELAHGGRGPSSNDRRGG
YGGGGGGGGGGGGGGARLGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD
GDGTLGLVDYTNHEDMKYAIRKLDDTEFKNPWARAYIRVKQYEGSPSRSRSRGRSRSRSR
SRSRSRSRSPRRNRSKSLERSVSRSRSRSRSRSKTRSASPLKSSRPKSRSRSKSESPTKA
RSGSA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgtggagcgtggttcacatggaggattgctctcttgcaaaggctttgctata
ttcttccgatacaaaaaaatgagtggtcgtttttctcgtacaatctacgttggcaactta
cctgcagatataagagaatcgaaagttgaagatctgttttacaagtatggccgtatcctg
gatgttgaattgaagattccacctcggcccccttgttattgttttgtcgagtttgagaat
gctcgggatgctgaagatgcaataaggggccgtgatggctataactttgatggttctcgt
ttaagggttgagcttgcccatggtggtagaggaccatcctcaaatgatcgtcgtggtggg
tatggtggtggtggtggtggtggaggaggagggggtgggggtggggctcgacttggcatc
tcacgccattctgaatttcgagttattgttcgtggtcttccttcttctgcttcctggcaa
gatttgaaggatcatatgcggaaagcaggagatgtgtgttttgctgaagttactcgtgat
ggtgatggaactttaggccttgttgattatacaaatcatgaagacatgaaatatgccatt
cggaaacttgatgatactgagtttaaaaatccctgggccagagcttatattcgggtgaag
caatatgagggctctccatcaaggagccgaagccgtgggcggagcaggagcaggagccga
agcaggagcaggagcaggagcaggagtccgaggaggaaccgaagcaaatcattggaacga
tctgtttcaaggtcaaggtcaaggtcaaggtcaaggtcaaaaactagatctgcttcacct
ctcaaatcatccagaccaaaatcaaggtccaggtcgaagtctgaatctcccaccaaggca
cggtcaggcagtgcctga
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