KEGG   Populus euphratica (Euphrates poplar): 105139150
Entry
105139150         CDS       T05872                                 
Name
(RefSeq) protein RRP45A-like isoform X1
  KO
K03678  exosome complex component RRP45
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105139150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peu03019]
    105139150
Messenger RNA biogenesis [BR:peu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105139150
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 105139150
NCBI-ProteinID: XP_011043789
LinkDB
Position
Unknown
AA seq 462 aa
MDGRLANAWRLTVNEKKFIETALVSNLRIDGRNPLEYRKISIKFGREDGSSEVHLGQTHV
MGFVTGQLVQPYQDRQNEGMLLIFTEFSPMADPSFEPGHPGESAVELGRIVDRGLRESRA
VDTESLCVLSGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGGDGQEV
TVHPPEEREPLPLIVHHLPIAITFAFLGSEGKMVVDPTHNEEAVMGGRMTVTVNAIGDIC
SIQKAGGEGVPQSVIMHCLQLASMSAESITKKINNAVEAYSTERALRKIKRHPTAAGNVS
VAGSDVKEQNKTVEQVGGSELSRHHMERLKLVSEETCSSRSNDNDGDIKSSEQGGTTRAE
SNAVSFLGGPSSWDPYLKGVDDDSLKANVASPGISMQHMEQKESKENSPKMDTEKPTEDI
KQATLATDTSGTALETNGGKTLKDAVKPKNKRRKRASSMNAS
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggatggaagattagcgaatgcatggagattaacagtgaacgagaagaaattcatagag
actgctttggtttcaaaccttagaattgatggtcgcaatcctcttgaatatcgtaaaatt
agcatcaagtttggcagagaagatgggtcatcggaggtgcatctaggacaaactcatgta
atgggttttgtgactggtcaattagttcaaccttatcaagaccgacagaatgaagggatg
cttttgattttcacagagttctctccaatggctgatccttcatttgagccaggccaccct
ggggaatctgcagtggagttgggtcgaatagtagatcgtggtctaagggagagcagggct
gtggatacagaatctctttgtgttctttcgggaaaattagtgtgggccattcgtattgac
cttcatatcttagataatgggggaaatcttgttgatgccgccaatattgctgctttggcc
gctctcttaacatttcgaagaccagaatgcactttaggtggtggtgatggtcaggaagta
acagtacatccaccagaggaaagagaaccgcttcctttgatagtccaccatctccctata
gcaataacttttgcatttttaggcagtgagggaaaaatggtggttgatcctacccacaat
gaggaggctgttatgggtggaagaatgactgtaacagttaatgcaattggtgatatttgt
tcaattcagaaagctggaggggagggcgtcccacagagtgttattatgcattgtttgcaa
cttgcttctatgagtgctgaatccataacaaagaagataaataatgcagttgaagcatac
agcacagagagagcattgcgcaagatcaagcgccaccctactgctgctggcaatgttagt
gtagctggtagtgatgtaaaagagcaaaataaaactgttgagcaggtgggaggtagtgag
ttgtcgaggcatcatatggagagattgaagctggtatctgaggaaacctgcagcagtaga
agtaatgacaatgatggtgatatcaaatcatctgaacaaggtggaacaactcgagcagag
agcaatgctgtgagttttcttgggggtccatcaagctgggatccttatttgaagggtgtt
gatgatgattccctgaaagctaatgtagcctcacccggaatatcaatgcagcatatggaa
caaaaagaaagtaaggaaaatagtcccaaaatggacacagagaaaccaacagaagatatt
aaacaagccactttagctacagatacatctggaactgcactggaaacgaatggagggaaa
actttgaaggatgctgtgaagcccaagaacaagaggagaaagagggcttccagcatgaat
gcaagttag

DBGET integrated database retrieval system