Populus euphratica (Euphrates poplar): 105139152
Help
Entry
105139152 CDS
T05872
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105139152
03036 Chromosome and associated proteins [BR:
peu03036
]
105139152
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105139152
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105139152
SLIK complex
105139152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
105139152
NCBI-ProteinID:
XP_011043801
UniProt:
A0AAJ6VA70
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MMQFFRNYTNEAVSQSVLEGKRQGRGVGRMLGNEDVDMTSSERELDMNTDVQYESEPDDV
VRLQGNVAADHDAGVNNSELQPSGRKNVAGKWGSSFWKDCQPMGNPGASDSGQDSKSEGR
NAEGSEDNESNGRDDRLDSEDEEGQKEAGKGGKGHSDVPADEMLSDEYYEQDGEDQSDSV
HYRGFSQSVDLSSRLQKKPVPIKINVSRRSRGLHNSEGYDDNNNDGDADYEEEEVEDDPD
DVDFDPDYGIASGHTGDKDKDWEGEDSDEDNNSDDLVISDGDDDDGSYYTKKPKSRQHVK
GGRNTKSAKENKSLHASGRQKRGKPSFEEDEYSAEDSDSDSDAVSKNMTKRGAHLRKSNA
RSTMSTSIGGRNNEVRTSSRSVRKVSYVESDESEEIDEGKKKKAQKEEVEEEDGDSIERV
LWHQPRGMAEDAMRNNRSTAPILLSHLFDSAPDWKEMEFLIKWKGQSHLHCQWKSFSELQ
NLSGFKKVLNYTKKVMEDVRYRRKFTREEIEVNDVSKEMDLDLIKQNSQVERIIADRITK
DSSGNIVPEYLVKWQGLSYAEATWEKDVDISFAQDAIDEYKAREAAIAVQGKMVDLQRKK
GKASLRKLEEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLG
FLQNGQQISGPFLVVVPLSTLSNWAKEFRKWLPNMNVIVYVGTRASREVCQQHEFYNDKK
VGRPIKFSTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNKL
LITGTPLQNSVEELWALLHFLDPDKFRSKDDFIHNYKNLSSFNEIELANLHMELRPHILR
RVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFQDLNKGVRGNQVSLLNIVVELK
KCCNHPFLFESADHGYGGDISTNDSSKLERIILSSGKLVILDKLLVRLHKTKHRVLIFSQ
MVRMLDILSQYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGIN
LATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVL
DHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEDNDEERKKRLLSMDID
EILERAEKVEEKEAGGEDGNELLGAFKVANFCSAEDDGSFWSRWIKPDAVTEAEEALAPR
AARNIKSYKEDNQPERSNKRKKKGLEASEPQERVQKRRKADYSTPLASMIEGASAQVREW
SHGNLPKRDALRFSRAVMKFGNLNQIDLIVEEVGGTVAAAPPEEQIELFDALVEGCREAV
EVGNLDPKGPLLDFFGAAVKANDLLSRVQVLQLLAKRISRYENPIAQFRVLTDLKPSNWS
KGCGWNQIDDARLLLGIHFHGFGNWEKIRLDERLGLSKKIAPAELQHHETFLPRAPNLKE
RANALLEMELAAVGGKNANAKGGRKPSKKERENVLNFTAARGRDKKVKPGSVMVSVQTNK
NRPQRPQRVEQLAKEEGEMSDNEELCEQFKEVKWMEWCEEVMFDEIKTLKRLSKLQTTSA
DLPKEKVLSKIRNYLQLIGRRIDQIVFEYEAELYKQDRMTMRLWKYVSTFSNLSGERLRQ
IYSKLKQEQEEDAGVGPSHANGAAYGSVDKDGDSNNFPPLSRNFERQRGYKNASAYPMSE
PTNRGHDAGKFEAWKRRRRAEADVQPQFQPPLQRPISNGTRLSDPNSLGILGAGPADNRP
FIERPFRARQTGFTPKQNFTSGIK
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatttttcaggaactatacaaacgaagcagtttcacagagtgtcctagaagga
aagaggcaaggtcggggtgtaggtagaatgttgggcaatgaggatgttgatatgacttct
agtgaaagagaattggatatgaacacagatgtgcaatatgaaagtgaaccggatgatgtg
gttaggttgcaaggtaatgtagctgccgaccatgatgctggtgtgaataattcagagctg
cagccttctggaaggaaaaatgtggctggaaaatggggttccagtttttggaaggactgc
caacccatgggtaatcctggggcatccgattctggacaggattccaaatcagagggtaga
aatgcagaagggtcagaagataatgaatcaaatggaagggatgatagattagattcagaa
gatgaagaggggcaaaaagaagcgggtaagggggggaaaggccattctgatgtccctgca
gatgagatgttgtctgatgaatactatgagcaggatggggaggatcaaagtgactcggtg
cattatagggggttcagccagtctgttgatttgagttctaggctgcaaaaaaagccggtt
cctatcaagattaatgtctccaggaggtcaagaggtttgcacaatagtgaaggttatgat
gacaataataatgatggcgatgctgattatgaggaagaagaagttgaagatgatcctgat
gatgtggactttgaccctgattatggcatcgccagtgggcacacaggggacaaggataaa
gactgggagggtgaagattcagatgaagataataacagtgatgatttggtcatctcagat
ggtgatgacgacgacggttcttattacacaaagaaacctaagagtaggcaacatgttaaa
ggtgggcggaatacaaaatctgccaaagagaacaagtcattgcatgcttctggacgacaa
aagagagggaaaccatcatttgaagaagatgagtattcagcagaggattctgacagtgat
agtgatgctgtttcaaagaacatgaccaagagaggtgcacatcttcgtaaatctaatgcc
cggtcgactatgtcaacaagcattggtggaagaaacaatgaggttcgaacttctagcagg
tcggttcgtaaggtgtcatacgttgaaagtgatgaaagcgaagaaattgatgaagggaaa
aagaagaaggcccaaaaggaagaagttgaagaagaagatggtgactccattgaaagggta
ctgtggcatcagccaaggggcatggctgaagatgcaatgaggaacaatagatcaacagca
cctattctcttaagccacctgtttgattctgctcctgattggaaagaaatggagttcttg
ataaagtggaaaggccagtcacatttgcactgccaatggaaatcattctctgaattacaa
aatctgagtggttttaagaaggtactgaactacactaaaaaagtgatggaagatgtgagg
tacaggagaaaatttacacgtgaggagatcgaggtgaatgatgtgagcaaggaaatggat
ttggatctaatcaagcaaaatagtcaggtggagagaattattgctgatcgaatcactaaa
gatagctccggaaatattgtgccagagtatttagtcaagtggcaaggactctcttatgct
gaagctacttgggaaaaggatgtagacatttcttttgcacaagatgctattgatgagtac
aaggcacgtgaggctgcaattgctgtacaggggaaaatggtggatctacagcgtaagaaa
ggaaaagcaagtttaaggaagcttgaagaacagcctgaatggttgagaggaggaaagctt
cgtgattaccagctcgagggtttgaattttctagttaacagttggagaaacgatacaaat
gttattttagctgatgaaatgggtcttggaaaaacggtccagtcagtttccatgctcgga
tttttgcagaatgggcagcagatctctgggccttttcttgttgttgtacctttatccact
ttgtctaactgggctaaagaatttagaaagtggcttcccaatatgaatgttatagtatat
gttggtacacgtgctagtcgagaggtctgtcagcagcatgaattttacaatgataagaaa
gttgggcggcctataaaattcagtactctgctgaccacatatgaagttgttttgaaggat
aaggcagtgctttctaagatcaagtggaattatttaatggtcgatgaagctcataggtta
aagaacagtgaagcgcagttgtacacaactcttttggaatttagcaccaagaacaagttg
ctaattactggcactccattacagaacagtgtggaagagctatgggctttgcttcatttc
cttgatcctgacaagtttaggagcaaggatgattttattcacaattataagaatcttagc
tcttttaatgaaattgagctcgctaatcttcacatggaattgaggcctcacattctcaga
agagtcatcaaggatgtggagaaatccttgcctccaaaaatagagcgtattctgagggtt
gaaatgtctcctctacagaaacaatactataaatggattttggaacgtaacttccaggac
ctgaacaaaggagttcgtgggaatcaggtctcacttctgaatattgtggtagagttgaag
aaatgctgcaatcatcctttcctatttgaaagtgcagatcatggttatggcggggacatc
agtactaatgatagcagtaaactggagaggattatcttaagcagtggaaagctagttata
cttgacaaactacttgtcagattgcacaagacaaaacatcgtgtcctgattttttcccag
atggttagaatgttggatatactgtctcagtacatgtcactcagagggttccagtttcaa
aggcttgatggtagcacgaaggctgagttgcgtcagcaggcaatggaccatttcaatgca
cctggcagtgatgatttctgcttccttctttcaactcgggctggtgggttaggcatcaat
cttgcaactgctgacacagttataatatttgattcagactggaatcctcagaatgacctg
caggcaatgagtagagctcataggattgggcagcaagaagttgttaacatctatagattt
gtgacaagcaaaagcgttgaggaagatatcctagagagagctaagaaaaagatggttctt
gaccatttggtgatccaaaaactgaacgcagagggtagattggaaaagaaagaagcaaaa
aaagggagttattttgacaaaaatgagctctcagcaattttaagatttggggccgaggaa
ctttttaaagaggacaatgatgaagaaaggaagaaaagactcttgagcatggatattgat
gaaattcttgaacgagcagagaaagttgaagagaaggaagctggaggagaggatgggaat
gaattgttgggtgcttttaaggttgcaaatttttgtagtgctgaagatgatgggagtttc
tggagtcgatggataaaaccagatgctgtaactgaggctgaagaagctttagctcctcgg
gctgcaagaaatattaagagttacaaggaggataatcaacctgagagaagtaacaaacgg
aaaaagaaaggtttggaagcatcagaaccacaggagagagtgcagaagcgtcgcaaagca
gattattctaccccactagcatcaatgattgagggagcatctgctcaagtaagagaatgg
tctcatgggaatctgcctaagagagatgctttacgtttttctcgtgcggtgatgaagttc
gggaacttgaaccaaatagacttgatagttgaggaggttggtggaacagtggcagcggcc
ccccctgaagaacagatagagctttttgatgctttggttgaaggttgtagagaagcagtt
gaagttggaaatctggacccgaagggccctttgttggatttttttggtgccgctgtgaag
gcaaatgatctattgagccgtgtgcaagtacttcagctgctagcaaagcgaattagccgt
tatgaaaatcccattgcacaatttcgagttttgacggacctgaagccttcaaactggtct
aagggatgtggctggaatcagattgatgatgcgaggttgcttctgggaatacactttcat
ggatttggcaattgggagaagatacggttagatgaaaggcttggcctttcgaagaagatt
gctcctgcagaactccagcatcatgagacctttctaccacgtgctccaaatttgaaggaa
cgtgctaatgcactcctggagatggaacttgcagctgttggtggaaagaatgcaaatgct
aagggtggtcggaagccctccaagaaggagagagagaatgttttgaacttcactgcagct
cggggcagggacaagaaagtgaagcctgggtctgtaatggtgagtgtacaaacaaacaag
aacaggcctcagagaccccagagagttgaacagttagcaaaagaggagggtgagatgtca
gacaatgaggaattatgtgagcagttcaaggaagtaaaatggatggaatggtgtgaagaa
gtcatgtttgatgaaattaaaaccctgaaacgtcttagcaagttgcagactaccagtgct
gaccttccgaaggaaaaggtgctttcaaaaataaggaattatttacagcttattggacgg
agaatagaccaaattgtcttcgaatacgaggcagagctttataaacaagatagaatgact
atgcgattatggaagtatgtttcaactttttcaaatttatctggtgagagacttcgtcag
atttattcgaaacttaaacaagagcaagaggaagatgcaggggttggaccatctcatgcc
aatggtgctgcatatggttctgttgacaaagatggtgattccaacaattttccacccctt
tctcgtaattttgagaggcaaagagggtataaaaatgcatcagcctatccaatgtcagaa
ccaacaaacagaggtcacgatgctgggaaatttgaagcatggaaacgacgcagaagagct
gaagctgatgttcaaccccaatttcagccccccttacaaagacctattagtaatggtacc
cgtttatctgaccctaattcgttggggattcttggggctggaccagctgataataggcct
tttattgagagaccttttcgagcacgtcaaactggttttactccaaaacaaaatttcact
tcaggtataaagtag
DBGET
integrated database retrieval system
