Populus euphratica (Euphrates poplar): 105139583
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Entry
105139583 CDS
T05872
Name
(RefSeq) zinc finger CCCH domain-containing protein 24 isoform X1
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peu03016
]
105139583
Transfer RNA biogenesis [BR:
peu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105139583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
zf-CCCH
RRM_1
Methyltransf_4
Ubie_methyltran
MTS
Methyltransf_15
Methyltransf_11
PCMT
Torus
PrmA
Motif
Other DBs
NCBI-GeneID:
105139583
NCBI-ProteinID:
XP_011044369
UniProt:
A0AAJ6Y6M5
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MASSSPKNQLSSSSETLNLPTETSLTQTNPMNAQDSPIPPEQQIQPSNSQDDTTTTTGEK
RKREKTTTTTTEAEAEAETEAEAETETETDPSLNPFYKTSLCSYFRRHMGASCSHGSACK
YAHGEEELRPRPDNTWDPTSERAKKAIKLDTTNNNDSKEEDEDEEIMMTDIAADGDGDGG
CLDTGLSKCLVHLPRKWLSDHLRKFLSDQGILFKSAKKKKGMSVGFLSFEDAEQLKKAIE
ELEGRSIGNKNIKVADVIPRQFEQKIKSAMAAPQNIPQTMEPALDGENAGICRPSDAIGD
GDGNNDNSTQAGSSCQAKCARDVATPLAHMPYDDQLEHKKNSIMQMLKKLTRNARKACPN
GVSLPEWILRSREIGGLPCELEGILESPLRNGYRNKCEFSVGYSLQGKPTVGFMLGNFRE
GVTAVEEPLGCPNVSSVACKYTSIFQEFLQQSGLPIWNRFKNTGFWRQLTVREGRLPRKA
ADIAIPEANISEVMLIVQVSSAGFDDDMITIELRGLAHAFTTGAAGSAPPLPLTALVIQD
HQGLSNVAPADAPLRTLLLPNANANGGSEVQATSSVAEARIHDYISNLRFSISPTAFFQV
NTLAAEKLYSLAGDWAGLGPDSLLFDICCGTGTIGLTLADRVGMVVGIEMNASAVSDAHR
NAEINGITNCRFVCAKAEDVIGSLLKEYLDVPQKEGEQLNASEIRDKEIAIIEVNNAPMD
DVLDSSKNPSHDLGNGEGASGHSENGGQEIQSQLQKSCTSKEGSSPMLHFKNVVAIVDPP
RGGLHPTVIKVLRTHSRVRRLVYISCNPETLVANAIELCTPSPEKVEKGNRNRAWRKMSS
AGLARHRVKSMPISEPFRPVKAVAVDLFPHTSHCEMVMLLER
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcatctccaaagaaccaactctcttcttcttctgaaaccctaaacctcccg
accgaaacttcccttacccagaccaacccaatgaacgcccaggattcacccatcccccct
gagcaacaaatacagccgtccaacagccaagatgacaccaccaccacaactggggagaag
cgaaagcgagagaagacaacaacaacaacgacagaagcagaagcagaagcagaaacagaa
gcagaagcagaaacagaaacagaaacagacccttcactcaatccattctataaaacctcg
ctctgttcctacttcaggcggcacatgggggcctcctgtagccacggcagtgcgtgtaag
tacgcgcacggcgaagaggagttgaggccccgcccggataacacctgggatcctacctcg
gagcgtgccaagaaagctatcaagctggacaccaccaataataatgatagtaaggaagaa
gatgaagatgaggagatcatgatgactgatattgctgctgacggtgatggtgatgggggt
tgtttggatactgggcttagtaaatgcttggtacatttgccccgcaagtggctttctgat
catttgaggaagtttctaagtgatcaagggattcttttcaaatctgctaagaaaaagaaa
ggcatgtccgtgggtttcctaagtttcgaggatgctgagcaattgaaaaaagcaatcgag
gagctggaaggaagatctattggaaacaagaatataaaggttgccgatgtcattccccga
caatttgagcagaaaatcaaatcagcaatggctgcccctcaaaacattccgcagacaatg
gaacctgcattggatggagaaaatgctgggatctgtagaccttcagatgctattggggat
ggtgatgggaataatgacaattcaacacaagctggttcaagctgtcaggccaaatgtgcc
cgtgatgtcgcaacacctcttgctcatatgccttatgatgatcagttggagcacaagaag
aactctatcatgcaaatgctcaaaaaacttacaagaaatgcacgcaaagcttgtcctaat
ggagtttctcttccagaatggattctcagatctagagaaataggtggtcttccatgtgaa
ctagagggtatacttgaatcaccacttagaaatggatatcgtaataaatgcgagttttct
gttggatattctcttcaaggaaaacctactgtgggttttatgctaggaaactttagggaa
ggtgtgacagctgtagaagaacctctgggctgccccaatgtttctagtgttgcctgcaag
tacacgtcaatctttcaggaatttttgcaacaatctggcctgccaatttggaatagattt
aagaatactggattctggcgtcaactaacggttcgagaaggaagattaccaaggaaagct
gctgatattgcaattcctgaggccaacatatcagaggtcatgcttattgttcaggtctcc
tctgctggctttgatgatgacatgataaccattgaactaagggggttggctcatgcattt
accactggagctgctggaagtgctccacctttgcctttaacagctttggttattcaggat
caccaaggactatcaaatgttgcaccagctgatgctccattgcgcacgctactccttcca
aacgcaaacgcaaatggtggttccgaggttcaagcaaccagtagtgttgctgaagcaaga
attcatgattatataagtaatcttcggttctctatatcaccaacagcttttttccaggtt
aacacccttgctgcagagaaactatactctcttgctggggattgggctggtctgggtcca
gatagcttgctatttgatatatgctgtgggacaggaacaattggcctcactttagcagat
cgtgttggtatggttgttggcattgaaatgaatgcttctgcagtttcagatgctcatcgg
aatgctgaaattaatggcataacaaactgtagatttgtttgtgcaaaggcagaggatgtg
attggctctttattgaaggagtatctagatgtgcctcagaaagaaggtgaacagctgaat
gcatctgaaatcagggataaagaaatagcaatcattgaagttaacaatgctcccatggat
gatgtcctagactctagcaagaacccaagccatgatcttggaaatggtgaaggtgcttct
gggcattcagaaaatggtggacaagaaatccaaagtcaacttcagaagagttgcacatca
aaagaagggagttctccaatgttgcattttaaaaatgttgttgccattgttgatcctccc
cgtggtgggctgcatcccactgtgattaaagttctgagaactcattcacgtgtacggaga
cttgtttacatttcttgcaatcctgaaaccttagtggccaatgctattgagctctgcacc
ccttctcctgagaaagttgaaaaagggaatagaaacagggcatggaggaagatgagcagt
gctggtttggcacggcacagagtcaagtctatgcccatttcagagcctttccgacctgta
aaagccgtggctgttgatcttttcccacatacctcacattgcgaaatggtgatgcttctg
gagaggtaa
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