Populus euphratica (Euphrates poplar): 105139604
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Entry
105139604 CDS
T05872
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105139604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105139604
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105139604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105139604
NCBI-ProteinID:
XP_011044407
UniProt:
A0AAJ6V9M9
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MASTGGAAPGTYTPTPTKKTQRSSFFSDSDVDWLRPDGRGFHQCRPAFFRTGAVNSAAGS
AYAEFGNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSCTTFATPARGLGLDNKEFSSMLH
KALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSVSC
LGRNLIIDPILEKESFQDGSLMITCMPSRYEVTQLSVTGEWSTAKLNEAMHLCLDACSKL
DKIMRACLKEAASASLD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacaggtggtgctgccccaggcacttacactcccactcccaccaagaaaacc
caacgttcttcattcttctctgactctgatgtcgactggcttcgtcccgatggtcgtggt
ttccaccagtgccgacctgcttttttcaggactggtgcggtgaattctgctgcaggatct
gcatatgctgaatttggaaatacaaaggtcatcgtttctgtgtttgggcctagagaaagt
aagaaagcaatggtgtacagtgatgtgggcaggcttaattgcaatgttagctgtaccaca
tttgccacccctgctcgtggactgggattagataataaagagttctcttccatgcttcat
aaggctttggaaggtgcaatcatgttggaaacttttcccaagacaactgtggatgtgttt
gcattggtgttagaatctggcggcagtgatcttcctgttgtaatatcttgtgcaagcctt
gccttggcggatgcagggattatgatgtatgaccttgttgctggagtttctgtgtcttgt
cttggtagaaacctcatcattgatccaattttggaaaaggaaagttttcaagatggaagc
ctgatgatcacttgcatgccttctcgttatgaggtcacgcagctttctgttacaggggaa
tggtcaactgcaaaactgaatgaggcaatgcacctttgcttggatgcttgctcaaagctg
gacaagataatgagggcatgtttgaaagaggctgcctcagcttcactggattag
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