Populus euphratica (Euphrates poplar): 105139848
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Entry
105139848 CDS
T05872
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105139848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105139848
Membrane trafficking [BR:
peu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105139848
Hops complex
105139848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
105139848
NCBI-ProteinID:
XP_011044765
UniProt:
A0AAJ6VCX0
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MANVSVAAEWQLLINRYYRKPELYPMRWKHIDLSRNKVACAPFGGPIAIIRDDSKIVQLY
AESALRKLRIFNSAGILLSETVWKHPGGRLIGMSWTEDQTLICIVQDGTIYRYNVHCEVL
EPNFSMGKECFEQNVVDCVFWGNGVVCLTEAGKLFCVPDFKQIKPCKLAEVGIGAEELPQ
CMAVIEPQYTVSGNVEVLLGVGSGIVIVDEDEVRFIDEEKIGGVVLKIAVSHNGRFLACF
MHDGRLVVMNTEFRDFFQYQCESALPPEQMAWCGLDSVLLYWDDVLLMVGPSEDSVSYIY
DEPVIFIPECDGVRILSNTSMEFVQRVPDSTVSIFKIGSTSPASLLFDALDHFDRRSAKA
DENLRLIRASLPEAVEACIDAAGHEFDVSRQRMLLRAASYGQAFCSNFQRDHIQEMCKTL
RVLNAVRDPEIGIPLSIEQYKLLSAPILIGRLINAHQHLLALRISEYVGMNQEVVIMHWS
CTKITASLAIPDAVLLEILLDKLKLCKGISYAAVAAHADRSGRRKLAAMLVDHEPRSSKQ
VPLLLSIAEEDTALMKATESGDADLVYLVLFHIWQKRPALEFFGTIQARPLARDLFIAYA
RCYKHEFLKDFFLSTGQLQDVAFLLWKDSWELGKNPMGSKGSPLHGPRIKLIEKAHNLFS
ETKEHTFESKAAEEHAKLLRIQHELEVSTKQPIFVDSSISDTIRTCIALGNHRAAMRVKT
EFKVSEKRWYWLKVFALVTIRDWEALEKFSKEKRPPMGFRPFVEACIDVDEKAEALKYIP
KLADPRERAEAYARIGMAKEAADAASQAKDGELLGRLKLSFAQNTAASSIFDTLRDRLSF
QGVS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtctccgtcgcggcggaatggcaactactaattaaccgatactaccgaaaa
cctgaactctacccgatgcgatggaaacacatagacttaagtcgcaacaaggtagcctgc
gctcccttcggcggtccaatcgctataatccgcgacgattccaaaatcgtccagctctat
gccgaatccgccctccgaaaactccgaatttttaactccgccggtatcctcctctccgaa
accgtctggaaacaccccggaggtcgattgatcggcatgtcatggaccgaagaccaaacc
ctaatttgcatagttcaggacggcacgatctaccgttacaacgtccactgcgaggttctg
gaacctaatttctctatggggaaggaatgctttgaacagaatgttgtggattgcgtgttt
tgggggaacggtgtcgtgtgcttgacggaagctgggaagttgttctgtgttcctgatttt
aagcagattaagccctgtaagcttgcagaagtagggattggagctgaggaattgccacaa
tgtatggcagttattgaaccgcagtatactgtttcgggtaatgtggaggtcttgttagga
gtaggaagtggaattgtgattgttgatgaggatgaggtgaggtttattgacgaggaaaaa
attggtggtgttgtgctgaaaattgctgtttcccacaacgggagatttttggcgtgtttt
atgcatgatggaagacttgttgttatgaatacagagtttagggatttttttcagtatcaa
tgtgagtctgctcttccaccagagcaaatggcttggtgtggattagatagcgtgttgctt
tattgggatgatgtgcttttgatggtgggaccttctgaggattctgtatcatatatttac
gatgaacctgtgatttttatccctgagtgtgatggagtgaggatattgtcaaatacgagt
atggagtttgtacaaagggtgcctgattctactgtgtctatatttaagataggaagcacg
tcacctgcgtcattgttgtttgatgccttggatcattttgacaggcgaagcgcgaaggct
gatgagaatttgagattgatacgtgcatccttgcctgaggctgttgaagcatgtattgat
gctgctggtcatgaatttgatgtttcccggcagcggatgctgctaagagctgcaagttat
ggtcaagccttttgcagcaattttcaacgtgaccacattcaagagatgtgcaaaactttg
cgggtcttaaacgctgtacgcgatcctgagattggcatccctctaagtattgagcagtat
aagttgctttcggcacccattctgattggtcgtttgattaatgctcaccaacatcttctt
gcactgcggatatcagaatatgttggaatgaatcaagaagtagttataatgcattggtca
tgcacaaagataacagcttcattagccattcccgatgcagtcctccttgaaatcttactt
gataagctgaaattatgcaagggaatctcctatgcagctgttgctgctcatgcagatagg
agtggccgccggaagttggctgctatgcttgttgatcatgaaccacgctcctcaaaacag
gttcctttattgttaagtatagcagaggaagatacagctctaatgaaggcaactgaaagt
ggtgacgctgaccttgtttaccttgtcctttttcatatctggcaaaagaggccagccttg
gagttttttggaacaatacaggccagacctctggctcgtgatttatttatagcttatgcg
cggtgttataagcatgaattcttgaaagacttcttcttatcaacaggacaacttcaagat
gtggcttttctcctatggaaagattcgtgggaactagggaaaaatccaatgggcagtaaa
ggatctccacttcacggtccacgcataaaactcattgaaaaggcccacaatctattttca
gagaccaaggaacatacctttgagtcgaaagcagcagaagagcatgcaaagctactgaga
attcaacatgagttagaagtctctacaaagcagcccatctttgtagattcaagcatcagt
gatacaattcgaacatgtattgcattgggaaatcatagagctgcaatgagagttaaaaca
gagtttaaggtttctgagaagagatggtactggcttaaagtttttgctttggtaaccatt
agagactgggaagccctggaaaagttttcgaaggagaagagaccaccaatgggtttcagg
ccatttgtggaagcatgcattgatgtggatgagaaagctgaagcactgaaatatattcca
aaacttgcagatcccagagaaagagctgaggcatatgctcggattggcatggcaaaggaa
gctgctgatgctgcttctcaggcaaaagacggtgaattgcttggtcgattgaaattgagt
tttgcacaaaatacagcagcttcatcaatttttgacaccctacgtgatcgtttgtccttc
caaggcgtctcatag
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