Populus euphratica (Euphrates poplar): 105140400
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Entry
105140400 CDS
T05872
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04142
Lysosome biogenesis
peu04145
Phagocytosis
peu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
105140400
04142 Lysosome biogenesis
105140400
04148 Efferocytosis
105140400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105140400
Membrane trafficking [BR:
peu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105140400
Hops complex
105140400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS18_solenoid_2nd
Pep3_Vps18
VPS18_solenoid_1st
Clathrin
VPS18_RING_C
zf-RING_11
zf_RING_Vps8
zf-RING_Vps41
RPN1_RPN2_N
Nup54_57_C
zf-rbx1
TXNDC16_2nd
Motif
Other DBs
NCBI-GeneID:
105140400
NCBI-ProteinID:
XP_011045511
UniProt:
A0AAJ6VDM1
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MDQSRQVFTVDLLERYASKGRGVITCMAAGNDVILLGTSKGWLIRHDFGAGGSSDFDLSS
GRPGDQSIHRVFVDPGGSHCIATVIGGGGAETFYMHAKWSKPRVLGRLKGLIVNAVAWNR
QLITEAPVLFWSSISELHFFIKQRRAMHFAWLSGAGIYHGGLNFGAQHSYINGDENFVEN
KALLDYSKLSDGADAVKPSSMAVSEFHFLLLIGNKVKVVNRISEQIIEELQFDQTSESVS
RGVIGLCSDATAGLFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALANCRDPLQRDQ
VYLVQADAAFTSRDFLRAASFYAKINYILSFEEVTLKFISVGEQDALRTFLLRKLDNLAK
DDKCQITMISTWATELYLDKINRLLLEEDNALDKRSSEYQSINQEFCAFLGDCKDVLDEA
TTMRLLESYGRVEELVYFASLKEQYEIVIHHYIQQGETRKALEVLQKPAVPIDLQYKFAP
DLIVLDAYETVESWMTTKNLNPRKLIPAMMRYSSEPHAKNETHEVIKYLEFCVHCLHNED
PGVHNLLLSLYAKQEDDDALLRFLQCKFGKGRENGPDFFYDPKYALRLCLKEKRMRACVH
IYSMMSMHEEAVALALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRENI
RKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLEDYNNQIEQLKQEMNDATHG
ADNIRNDISALAQRYAVIDRDEECGVCKRKILIVGGDYRMSRGYTSVGQMAPFYVFPCGH
AFHVHCLIAHVTCSVNGTQAEYILDLQKQLTLLGDGARKDMNGGITEDSITSMTPADKLR
SQLDDAIASECPFCGELMIRQISLPFILSEEALLVNSWEIKPQNNLANMRTLSLPV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcacggcaagtattcaccgtcgatctcctagaacggtacgcatcaaaaggc
cgtggtgttatcacctgtatggcagcaggaaacgatgtcatcttattaggtaccagcaaa
ggttggcttattcgacacgatttcggcgccggcggttcttccgattttgatctttctagt
ggacggcctggcgatcaatctatacatagagtgtttgtggatcctggtggtagccactgt
atcgccaccgttattggtggaggtggtgcggagacgttttatatgcatgctaaatggagt
aagcctcgtgtgcttgggaggttgaaaggtttgatcgttaatgctgttgcttggaatcgg
caactgattactgaagctcctgtgctgttttggtcatctatcagtgaattgcattttttt
atcaagcaaagaagagcaatgcattttgcatggctttctggagcaggtatctatcatggt
ggcttaaattttggagcgcagcatagttacataaatggtgatgagaattttgtggagaat
aaggctcttttggactattcaaaattaagtgatggtgctgatgcagttaaaccgagttca
atggcagtttctgaatttcatttcttacttcttattggaaacaaggttaaggttgttaac
agaatcagtgagcaaattatagaggagcttcagtttgaccaaacatcagaatcggtttca
aggggtgttatcggattatgcagtgatgccactgctggcttgttctatgcatatgaccaa
aattctatttttcaggtatctgttaacgatgaagggagagatatgtggaaggtgtatcta
gacatgaaagaatatgctgcagctttagcaaattgccgagacccactccagagagaccaa
gtatatttagtgcaggcagatgctgctttcacctccagggattttctaagagcagcatct
ttctatgcaaaaattaattacatattatcatttgaggaagttacgttgaagtttattagt
gtaggcgaacaggatgctttgcgaacttttttgttgcggaagcttgataatcttgccaag
gatgacaagtgccaaataacaatgatttccacatgggcaactgaattgtacttggataag
ataaatcggctactcttggaagaggataatgctttggataaacgtagttctgagtaccaa
tcaatcaatcaagagttttgtgcttttctcggtgactgcaaggatgtcttggatgaggca
actactatgagacttctagagagctatggaagggttgaagaactagtgtattttgctagt
ctgaaggaacagtatgaaattgtaattcaccactatattcagcaaggagaaacaaggaaa
gcattggaagtgcttcagaaacctgctgttccaatagaccttcagtacaagtttgcccca
gatctcattgttctcgatgcatatgaaacagttgagtcatggatgaccacaaaaaacctg
aacccaagaaaactgattcctgcaatgatgcgttattcaagtgaacctcatgcaaagaat
gaaacccatgaagtcatcaaatatttggaattctgtgttcattgtttgcataatgaggat
cctggagttcacaacttgcttctttctctctatgctaaacaggaagatgatgatgcactt
ttgcgtttcctacaatgcaagtttgggaaaggacgagaaaatggtccggatttcttctat
gatcccaagtatgccttgcgcctttgcctcaaagaaaagcggatgcgtgcctgtgttcac
atatacagcatgatgtccatgcacgaagaagcagttgctcttgctctacaggttgacccc
gagcttgcaatggctgaagctgacaaggtggaagatgatgaagatttgagaaagaagctt
tggcttatggttgccaagcatgtcattgaacaagaaaagggaactaaaagggagaatata
aggaaggcaatagcatttctcaaggaaactgatggccttctaaagattgaggatatatta
ccattctttccagactttgccctaattgatgacttcaaggaggcaatttgctcatcattg
gaggattacaacaaccaaatcgaacaactaaaacaggagatgaatgatgctacacatggc
gctgacaacataagaaatgatattagtgcacttgctcaaagatatgctgtcattgaccgt
gatgaggaatgtggggtttgtaagcgcaaaatcttgattgtgggtggggactaccgtatg
tctcggggctatacatcagtaggacaaatggctcccttctatgtatttccatgtgggcat
gcctttcatgtgcattgcttgattgcccatgtgacatgttcggtcaatggaactcaagca
gaatatatactggatctgcagaagcagcttacattgcttggtgacggagcgaggaaagac
atgaatggtggcataaccgaggattccattactagcatgactcctgcagataagctccgt
tctcagctggatgatgcaattgcaagcgaatgtccattttgtggtgaattgatgatccgt
cagatctctttgccttttatactctctgaagaagcactgctggttaattcatgggagata
aaaccacaaaacaaccttgcgaacatgaggaccctctctttaccggtatga
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