KEGG   Populus euphratica (Euphrates poplar): 105140556
Entry
105140556         CDS       T05872                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105140556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:peu03041]
    105140556
   03036 Chromosome and associated proteins [BR:peu03036]
    105140556
Spliceosome [BR:peu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105140556
 Complex B
    105140556
 Complex C
   U2 SnRNP specific factors
    105140556
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    105140556
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N Htt_N-HEAT_1 HEAT_2 HEAT_ECM29 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd UME Adaptin_N DUF1249
Other DBs
NCBI-GeneID: 105140556
NCBI-ProteinID: XP_011045727
UniProt: A0AAJ6VC64
LinkDB
Position
Unknown
AA seq 1264 aa
MDPEIAKTQEERKKMEQQLASLTSLTFDRDLYGGVDREAYETSIPATDDEEPDMGLNEVA
QRLASYTAPKSVLKEMPRGGDDSEETDGFRKPSRIIDREDDYRRRRLDRIISPERHDPFA
AGEKTPDPSVRTYSDVMMEESLKKQKEELLRKIANKKKEEEEARAEKEEKVASSVPKRSN
RWDQSKEDDGKVVKKAKTGSDWDLPDATPGIGRWDATPTPGRIGDATPGAGRRNRWDETP
TPGRVVDSDATPAGGVTPGATPAGVAWDATPKGMVTPTPKRQKSRWDETPASMDSATPAL
GAVTPSLGGVTPGPTPLGAIDMATPTPNALAMRGAITPEQYNLLRWEKDIEERNRPLTDE
ELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYSIPDENRGQQFDLGQEPP
AGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTD
KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL
LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI
PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV
RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAMY
ANYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRSDILPEFFRNFWVR
RMALDRRNYRQLVETTVEIADKVGVKDIAGRIVEDLKDESEPYRRMVMETIEKVVANMGA
SDIDSRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL
NNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI
VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF
ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA
ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVTEAIEGMRVA
LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPILEDEQDNVYSRPEL
MMFV
NT seq 3795 nt   +upstreamnt  +downstreamnt
atggatcctgaaatcgccaaaacccaagaagaacgcaagaaaatggaacaacaacttgcc
tctttaacctctttaacctttgatcgtgacttgtatggtggagtcgaccgtgaggcttat
gaaacgtcgattccagcgaccgatgatgaagaacccgacatgggccttaacgaggttgct
cagagactcgcttcgtatactgcaccgaaatccgttcttaaagaaatgcctcgtggcggt
gatgatagcgaagaaactgatgggtttaggaagccatcgagaattattgatcgcgaggat
gattataggaggaggagattggatagaattatttcgccggagaggcatgatccttttgct
gccggtgagaagacgccggatcccagtgtgaggacttattcggatgttatgatggaagaa
tctttgaaaaagcagaaggaggagttgttgaggaagattgccaacaaaaagaaggaagaa
gaggaggcgagggctgaaaaggaggaaaaggtggcgagttcagtgcctaaaaggagcaat
aggtgggatcaatcgaaggaggatgatgggaaagtggttaagaaggcgaagacaggttcg
gattgggatttacctgatgctacaccgggaattgggcgatgggatgcgacacctactccg
gggaggattggagatgctacacctggtgctgggagaaggaataggtgggatgagactcct
acaccggggagagtggttgattcagatgctactcctgcaggtggggttacgccaggggct
actcctgctggtgttgcttgggacgctactcctaaaggaatggttacccctaccccgaaa
aggcaaaagtctcgttgggatgaaactcctgctagtatggatagtgcgactcctgctctt
ggggcggttactcctagtcttggtggtgtgactcctggacctactcctcttggtgcaatt
gatatggctactccaactccgaatgcacttgccatgcgcggggcaataacgcctgagcag
tataatctgctgaggtgggagaaggatattgaggagaggaataggccattgactgatgag
gagttggatgctatgtttcctcaagaagggtacaagattttggagccaccagcttcttat
gtgcctattaggacaccagcaaggaagttgttggctaccccaacaccaatgggcactcct
ctttattctattcctgatgagaacagagggcaacagtttgatctagggcaggagcctcct
gctgggttgccatttatgaaacctgaggattatcagtattttggtgctttgttgaatgag
gaagatgaggaggagttgtccccagaggagcagaaagagaggaagattatgaaactttta
ctgaaagtgaagaacgggacacctccacagaggaagactgctttgaggcagttgacggat
aaggctagagaatttggtgctgggccattgttcaacagaattttgccactgcttatgcag
cctaccttggaggatcaggaaaggcatcttctggttaaggtgattgatagggttttgtat
aaattggatgagttagttaggccttatgttcataagattcttgttgttattgaaccactc
ttgattgatgaggattattatgcccgtgtggaggggagagaaattatttctaatttgagt
aaagcagctggtttggccactatgattgctgctatgcgtcctgatattgataatattgat
gagtatgttaggaacacaacggcaagagctttcagcgttgtcgcttcagctctcgggatt
cctgcattgttgcccttcttgaaagctgtgtgtcagagtaagaaatcctggcaagctcgt
catactggaatcaaaattgttcaacagattgctattttgattggctgtgctgttcttccc
catttgaggtctcttgtggaaatcatagaacatggtctgaatgatgagaatcagaaggtg
aggactatcactgccttgtccttggctgctcttgctgaggctgctgccccatatggcatt
gaaagctttgattctgttctgaagccattgtggaagggcattaggtcacaccgtggcaag
gtcttggctgccttcttgaaagcaattggttttattattcctctcatggatgctatgtat
gccaattactacaccaaggaagtcatgtttattctgatacgtgagtttcaatcacctgat
gaagaaatgaagaagattgtgttgaaggtggttaagcaatgtgtgagtacagagggcgtg
gaggctgaatatatacgttctgatattcttcccgagttctttaggaacttctgggttaga
aggatggccttggataggagaaattataggcaactcgtggaaacaactgttgagattgct
gacaaggttggtgttaaagatattgctggcagaattgttgaggatctgaaagatgagagt
gaaccatacaggcgtatggttatggaaacaattgagaaggttgttgcgaacatgggtgca
tctgatattgattctaggttggaagaacttttgattgatggcattctctatgctttccaa
gagcagaccagtgatgatgctaatgtgatgcttaatgggtttggtgcagttgtcaattct
cttggacagagggtgaaaccttaccttccccagatttgtggtaccattaagtggcgcttg
aacaacaagagcgctaaagtgagacagcaagctgctgatcttatttcaaggattgctgtt
gtcatgaaacaatgtcaggaggaacaactgatgggtcatcttggtgttgtgttgtatgaa
tatttgggagaagaataccctgaagttcttggatcaattctaggagctctcaaagcaatt
gtcaatgtcattggaatgaccaaaatgactcctcctattaaggacttgcttccaagactg
acaccaattctgaagaataggcatgagaaagtccaggagaactgtattgaccttgttggt
cgaattgcagatcgtggagctgagtttgttcctgccagggagtggatgaggatttgtttt
gagcttcttgagatgcttaaggcccacaagaagggcattcggcgtgctactgtgaacact
tttggttacattgctaaggccattggaccgcaggatgtcttggcgactctgttaaataac
ctcaaggtccaggagcgccaaaatcgtgtttgcacaactgttgccattgctatagttgca
gaaacctgttcaccttttacagtcttgcctgccttgatgaatgaatatcgtgtcccagag
cttaatgtgcagaatggtgtcttaaaatccctctctttcctgttcgagtacattggcgaa
atgggtaaagactatatctatgcagtgactccattacttgaggatgcactcatggaccga
gatttagttcacaggcagactgcagcttccgctgttaagcatatggctttgggtgtggct
ggtttgggttgtgaagatgcattggtccacttgcttaactatgtgtggcccaacatattt
gagacttcccctcatgtgataaatgccgtcactgaagccattgaaggaatgagggtggcc
ttaggtgctgctgttgtgttgaactactgtcttcaggggctgttccatcctgcccggaag
gtcagggaagtatactggaagatatacaattcactgtatattggtgcacaggatgctctt
gtggcagcttatcctatactggaggatgagcaggataacgtctatagcaggcccgagttg
atgatgtttgtataa

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