Populus euphratica (Euphrates poplar): 105140697
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Entry
105140697 CDS
T05872
Name
(RefSeq) regulator of nonsense transcripts UPF2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105140697
03015 mRNA surveillance pathway
105140697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105140697
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105140697
mRNA cycle factors
P-body specific factors
105140697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Xpo1
DUF2828
Motif
Other DBs
NCBI-GeneID:
105140697
NCBI-ProteinID:
XP_011046308
UniProt:
A0AAJ6YA86
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MDHHEDESRGGSVTPRKQDDEEAVARLEEMKKSIEAKVALRQSNLNPQRPDSGFLRTLDS
SIKRNTAVIKKLRQINEEQKEGLMEELRNVNLSKFVSEAVTSICDAKLRTSDIQAAVQIC
SLLHQRYKDFSPSLVQGLLKIFFPGKSGEDLDVDKNSKAMKKRSTLKLLLELYFVGVTED
SSIFINIIKDLTSIENLKDRDTTQTNLTLLASFARQGRVFLGLPLSGQETQEEFLKGLSI
TTDQKKIFRKAFHTYYDVVAELLQSEHASLRQMEHENAKMLNAKGELSDDNVSSYEKLRK
SYDQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDASSPAAGKDTSLLEALWDDEDTR
AFYECLPDLRAFVPAVLLGEAEPKANEHSAKTQDQPSELAPESDQGQPTQDMAEVSTESG
PLQEGKSTEKGKDKEEKDKEKVKDPEKEKGKEKDAERKGEIEKEKLKSLEGTNLDALLQR
LPGCVSRDLIDQLTVDFCYLNSKSSRKKLVRALFSVPRTSLELLPYYSRMVSTLSTCMKD
VSSMLLQMLEEEFNSLINKKDQMNIETKIRNIRFIGELCKFRIAPASTVFSCLKACLDDF
THHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLC
KPPERSARVSKVRPPLYQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFMKVH
KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRIAHMRFLGE
LYNYEHVDSSVIFETLYWILVFGHDTPEQDVLDPPEDCFRIRMVIILLETCGHYFDRGSS
KRKLDRFLIHFQRYILSKGSLPLDVEFDLQDLFAELRPNMIRYSSIEEVNAALIELEENE
RTVSTDKLNSEKHSDTDKPLCRTASNTISANGQSILNGNEENGSHEDIGGSDTDSGSGTI
DQDGHDEEELDEENHDGGVDTEDEDDDGDGPASEEEDEVHVRQRVAEVDPLEAASFEQEL
RAVMQESMEQRRQELRGRPALNMAIPMNLFEGSAKDHHGRVVGGESGDEDEEAGGNKDVQ
VKVLVKRGNKQQTKQMYIPRDCSLVQSTKQKEAAEFEEKQDIKRLVLEYNDREEEENNGL
GTQTLNWMPGGTSRVTSRGSTWEGSSGRGTGSRYRHHHHSGSGLHGRRR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccacgaagatgagagccgtggtggaagtgtaactcctagaaagcaagacgac
gaggaagcggttgctcgactcgaggaaatgaagaaatctatcgaggcaaaagttgctctt
cgtcaaagcaatttgaatcctcaaaggccagattcaggatttctcaggacactggattcc
agcattaagcgcaatactgctgttatcaaaaaattaaggcagataaatgaagaacagaag
gaaggactgatggaagagttgcgaaatgtgaaccttagcaaatttgtcagtgaagctgtg
acatccatttgtgatgcaaaacttagaacttctgacatacaagcagctgttcagatctgt
tcactgcttcatcaacggtacaaagacttctcaccaagcctggtacaggggctcttaaag
atcttttttcctggaaaatcaggggaagacttggacgtggacaagaactcaaaggctatg
aagaagcgaagcaccttaaaactgcttttggaactttactttgttggagttacagaagac
agcagtattttcatcaatattattaaggatcttactagtatagaaaacttgaaggacaga
gatactactcagacaaacttgactctccttgctagttttgctcgacaaggaagagtcttt
ctggggcttcccctatctggacaagaaacccaggaagagtttctcaagggccttagcatc
accactgatcaaaagaaaatcttcaggaaagcctttcatacatattatgatgttgtcgcc
gaactacttcaatcagagcatgcttcacttcgtcaaatggagcatgaaaatgcaaagatg
ctgaatgctaaaggagagctgagtgatgataatgtttcatcatatgaaaagctgcgaaaa
tcttatgaccaattgtaccgtaatgtgtcatctttagcagaagcacttgatatgcaacct
ccagtgatgccagaagatggtcatacaactagggttactagtggggaggacgcttcatca
cctgcggcagggaaagatacttctctccttgaagctttgtgggatgatgaagatactaga
gccttctatgaatgcttaccagatctcagagcatttgttccagcagtattattgggagag
gcagaaccaaaagcaaatgagcattctgcaaagactcaagatcaaccaagtgagctggca
cctgaatcagatcaaggccaacccacccaagatatggcagaggtttctacagagtctggc
cctttacaggagggaaaaagcacagagaaggggaaggataaggaagaaaaagataaagaa
aaggtaaaagatcctgaaaaggagaaagggaaagaaaaagatgcagagagaaaaggagaa
attgagaaggagaaactcaaaagtcttgaagggactaatttggatgctctgttacagagg
cttcctggttgcgtcagccgtgacctaatcgatcaattgactgtagatttttgttatcta
aattcaaagtcaagtcggaagaagcttgtaagggcattatttagtgtacctaggacatct
ctagaactgcttccatactactcacgcatggtttccacactctcaacatgcatgaaggat
gtctcttccatgctcttacaaatgttggaggaggagttcaattccttaataaataaaaag
gatcaaatgaatatcgagacaaagatcaggaatattagatttattggagagctctgcaag
ttcagaattgcaccagcaagcactgtttttagttgcttgaaggcttgtttagatgatttc
actcaccataacattgatgttgcttgcaatcttcttgagacatgtggccgttttctgtat
cgttctcctgaaactactgtgcgcatggctaatatgttggagatacttatgcgcttgaaa
aatgtcaaaaatttggatcctcggcatagcacccttgtagaaaatgcttactatctgtgc
aaaccacctgaaaggtctgcacgagtgtctaaagtccgtcctcccttgtatcagtacatc
agaaaattattattctccgatctagacaagtcttccattgagcatgtgctccgtcaactt
cgtaaattaccatggagtgaatgtgaggcatatcttttaaagtgttttatgaaggttcat
aaagggaagtatgggcaaattcacttgattgcttctctgactgctggcttaagccgttat
catgatgaatttgcagtggcagttgttgatgaggttttggaggagattcggcttgggctg
gaactaaatgactatgggatgcagcagaggcgcatagcccacatgcgattcttgggggaa
ctatacaattatgaacatgtggattcatctgtgatttttgagacgctgtactggatcctt
gtgtttggtcatgacactccagagcaagacgtgctagatccaccagaggattgtttccgc
atcaggatggttatcattcttctggagacttgtggacactactttgaccgaggttcttct
aagaggaaacttgatcgatttctaatacactttcagaggtatattctcagcaaaggttcg
ctacctcttgatgttgaatttgatttgcaggacttatttgctgaattacgtccaaatatg
atacggtattcatcaattgaagaagtcaatgctgctcttatagaactcgaggagaatgaa
cgaactgtctcaactgacaagctcaatagtgaaaagcactctgacactgacaaaccgcta
tgtaggactgcttccaataccatctctgccaatggacaaagcattttgaatgggaatgaa
gaaaatggatcgcatgaggacattggtggcagtgacactgattcaggcagtggcaccatt
gaccaggatggacatgatgaagaagagttagatgaagagaatcatgatggtggggttgac
acagaggatgaggatgatgatggggatggacctgcttctgaggaggaggatgaagtccat
gtcagacaaagggttgcagaggtggaccctcttgaagcagccagttttgagcaggaactg
agagctgtaatgcaggagagcatggagcagcgcaggcaggaactccgtggtcgaccagca
ttaaatatggcgatacccatgaacttgtttgaggggtctgctaaggatcatcatggaagg
gtggttggaggggaaagtggtgacgaggatgaggaagctggaggaaacaaagatgttcag
gtgaaagttcttgtgaagcgtgggaataagcaacaaacaaagcagatgtacattcctagg
gattgctctcttgtgcagagcacaaaacagaaagaagcagccgagtttgaagagaagcaa
gacatcaagaggctggtgttggagtataatgatcgagaggaggaggagaataatggtttg
ggtactcagactttgaattggatgccaggtggtaccagcagagttaccagccgtggcagc
acatgggaaggaagtagtggaagaggcactgggtcacgttaccggcatcatcatcattca
ggtagcggactccatggcagaagaaggtga
DBGET
integrated database retrieval system
