Populus euphratica (Euphrates poplar): 105140831
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Entry
105140831 CDS
T05872
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105140831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105140831
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
105140831
SWR1 complex
105140831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-GeneID:
105140831
NCBI-ProteinID:
XP_011046129
UniProt:
A0AAJ6VED2
LinkDB
All DBs
Position
Unknown
AA seq
2025 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALEAPREPRRPKAHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKKLKEEEQRLRKVALNISKDVKKFWVKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDKLSEQYAAQDKPRIAYNKGDDANIPEQVN
DEPQLDSTDNDDEYDVQSEDEVEDDEHTIEEDEALITAEERQEELEALHNEKDIPLEELC
NRYTVEKGSRESSENGAKPSANGEDHCERKGNNMSAASDMEISCSPVNASRRCGKNNGAL
PIPDNDLLEIRTNETRNQLSISDDPAKERVPYDFSDEQEDGDFNLAAQEEKDDETTLLEE
EELAKADSRNPIDEISLLQKESEIPLEQLLARYTKEPNNEVSEDESECASLLSDNVSNSP
GHEDELKQLDNSMDGIFERGNHPLVEELEKGNEKISEDGSESENRIADAAAAARSAQPTG
NTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLA
HLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKCKRQGWLKPNSF
HVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPL
QNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPITGMVEGQERVNKEVVDRLHNVLRPFIL
RRLKRDVEKQLPMKHEHVIYCRLSRRQRNLYEDFIASSETQATLATANFFGMISIIMQLR
KVCNHPDLFEGRPIISSFDMAGIDMQLSSSVCSVLSPGPFSSVDLCALGLIFTHLDFSMA
SWEYDEVKSIATPSRLIKERSNLDSIEVGPGSKHLKKLPGTNIFEEISKSLLEERLREVK
QRAASIAWWNSLRCQKKPIYSTTLQELLAVKRPIYDVHRHKTERLSYLYFSKLGDVILSP
IERFQKMIDLVESFMFAIPAARTPVPVFWCSQTRTPVFLHSTYEEKCSEMLLPLLSPIRP
AIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEVFMNLYG
YTYMRLDGSTQPEERQTLMQRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDSDWNPA
MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKK
LDPMELFSGHKTLQSKKMQREKNHKNGNEVSLSTADVDAALKYAEDEADYMALKKVEQEE
AVDNQEFTEDAIGRLEDDEFVNDDDMKADEPTDHEMTTYSKDGAVNLKENGCIEERAVTL
TGNEDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRYAVRFLELWDPIIDKGALESQV
GFEETEWELDRIEKYKEEMEAEMDDDEEPLVYERWDADFATEAYRQEVEALTQHQLLEEQ
EAEANDKEGAEDEHLDAMVRYKMPRNPKFKSKKKPKKAKFKSLKKESLTSELKHVKEEES
METLSVDDDDDGTYSDTMSPCSSMWRKRKKAESAIGIDKTRSKKKTKKFKKGPETCTFNV
DSDLSGKQHDKSMELKPYEVVVSDIEQKPASRSKMGGKISISTMPVKRVLMIKPEKLKKG
NVWLKDCVPPPDSWKPQEDAVLCAVVHEYGPHWSLVSETLYGMTAGGFYRGRYRHPVHCC
ERFRELIHRYVLFSPENPINNEKMSNMVSGKALLKVTEDNIRMLLNVVAEQPDHELLLQK
HFTALLSSVWRVKSRVENQQNMPSSRNALYDSGRVFNSSVNPLPWNSLRESGKRMKFTNL
GQGTKLLAAALHDASSRRPGDRVSNSNVNEEAPAIGEKLEITLEFQKEENDYLVPFPPLI
SLSIPGSAPWMSVNKDRAAAHHLRASTSIAENRFRDAARASSSVLPANDLKLLLASKTQS
LGKHKLSVSESTKPPRSKTRKTLLEQNEGHAEPIMQPLSVRDPKLRFDLPPAVIQDDKDE
FSISCMEKELSVETGISEAVPHNYVPDLISGLDDYSLLPEYTDIG
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaaggcccgaggtctaagcttgatcacgagaccagagctcggcgtcaaaag
gcactggaagctccgagggagccgcgtcgccctaaggctcactgggatcacgtcttggag
gaaatggtttggttatcgaaggactttgagtcggagaggaaatggaaattggcacaagcg
aagaaagtggctttaagagccagtaagggcatgttggatcaggccaccagaggagagaag
aaactgaaggaagaggagcagcggctgcgaaaagttgctcttaatatttcaaaggatgta
aagaaattctgggttaaaatagaaaagctggtactttacaagcatcagatggagcttgat
gagaagaagaaaaaggcacttgataagcagcttgagtttcttctaggacaaactgagagg
tactctacaatgttagcagaaaatctagtggacaaactatcagagcaatatgctgcacaa
gataaaccgagaattgcatacaataaaggagatgatgctaatatacctgagcaagtcaat
gatgagcctcagttggacagtacagacaatgacgatgagtatgatgtgcaatctgaagat
gaagtggaagatgatgagcatactattgaggaagatgaggctcttataactgcagaggaa
agacaagaagaattggaagctctgcacaacgaaaaagatattccactcgaggagctttgt
aaccgttatactgtagagaaaggtagcagagaaagtagtgaaaatggagctaagccatct
gcaaatggggaagaccattgtgagaggaaaggaaacaatatgtctgctgctagtgacatg
gagataagctgctcacctgttaatgctagtcgtcgttgtgggaaaaataatggggccttg
cccattccagacaatgacttattggaaatcaggaccaatgaaaccagaaatcagttaagt
atttctgatgatccagccaaagaacgtgtgccatatgatttcagtgatgaacaggaagat
ggtgatttcaatcttgctgcacaagaagagaaggatgacgagacaaccttgttggaggag
gaagagctggcaaaagcagattcaaggaatcccatagatgagatctcattgctgcaaaag
gagagtgaaatccctttggaacaattgcttgcaaggtataccaaggagcctaacaatgaa
gtttcagaggatgaatctgaatgtgcatctttattatcagacaatgtgtcaaattcccca
ggccatgaagatgaactgaagcagctggataactcaatggatggaatttttgaacgtgga
aaccatcctcttgtagaagaactagaaaagggaaatgaaaaaatttctgaagatggaagt
gagagtgagaataggattgctgatgctgctgctgctgcaagatctgcacaaccaacaggc
aatacattctcaacaactaaagtgcgcacgaagttcccttttcttcttaagtatcctctt
cgtgaatatcaacatataggccttgattggcttgttacaatgtatgagaaaagattaaat
gggattctagctgatgaaatggggcttggaaagacaatcatgactattgctttgcttgca
caccttgcatgtgaaaagggaatatggggtcctcatctgattgtggttcccacaagtgtc
atgcttaactgggaaacagagtttcttaaatggtgtcctgccttcaagattttaacatat
tttggcagtgcaaaagagcgtaaatgcaagaggcaaggttggctgaaaccaaactccttc
catgtatgcataacaacttacagactggttatacaggattcaaaagtcttcaaaaggaag
aaatggaagtatttaatattggatgaagctcatctgattaaaaattggaagtctcagaga
tggcaaactcttttaaacttcaattcaaaacgacgaatcttattaactgggacacctctg
cagaatgatctcatggaactctggtcactgatgcatttcttgatgccccatgtctttcaa
tctcatcaggaattcaaggactggtttagcaatccaataactgggatggtggagggacaa
gaaagagtgaacaaagaagttgttgatcgtttgcataatgttctccgtccattcatcctc
cgtcgattgaaaagggatgtggagaagcagctgcccatgaaacatgagcatgtcatctac
tgtagactttctaggaggcagcgtaacttgtatgaggatttcattgctagctcagagaca
caagctacccttgccactgccaacttttttgggatgatcagtatcataatgcaacttcga
aaagtttgtaaccatcctgacttatttgagggtcgtccaattattagttcttttgacatg
gctggtatagacatgcaattaagtagttctgtttgttcagtgctttcacctgggccattt
tcatctgtagatctttgtgctttggggcttatatttactcatcttgattttagcatggcc
tcttgggagtatgatgaagtaaagtccattgcaactccatcaagattaattaaagagcgt
tccaacctggatagcatagaagttggaccgggatctaaacatttgaagaagttgcctgga
acaaatatttttgaagagattagtaagtcattattggaggagagattaagagaagtgaag
caacgggcagcatctattgcatggtggaattccttgaggtgtcagaaaaaacccatatac
tcaacaaccctacaagaacttcttgcagtgaagcgtcccatctatgatgtccatcgccat
aaaactgagcgactctcctacttgtacttctctaagctgggtgatgttattctctcacca
attgaacggttccagaagatgattgatctcgtggaatcatttatgtttgcaattccagca
gcacgtaccccagtacctgtcttctggtgtagtcagactagaactccagtgtttcttcat
tcaacttatgaggagaaatgctctgaaatgttgttacctcttctttcacctattagacct
gcaattgttcggagacaactttatttcccagacaggcgtctaatacagtttgactgtggt
aaattgcaggagcttgcaattttgctaaggaagttgaagtcagaaggacaccgggtatta
atattcacacagatgactaagatgcttgatattttggaggttttcatgaatttgtatggc
tacacttacatgcgtttagatggatccactcaaccagaagagagacaaacattaatgcag
cgtttcaacacaaatcccaaaatctttatcttcattttatcaacccgtagtggaggtgtt
ggcatcaatcttgttggggcagatactgtaatattctatgatagtgactggaatcctgct
atggatcaacaggcccaagaccgctgccatcggataggacagacacgtgaagtacatatc
tacaggttaatcagtgagagcaccattgaagaaaacatcttaaagaaagccaatcagaag
cgtgctcttgatgatctagttatacagagtggagggtacaatacggaatttttcaagaag
ctggatcctatggaattattctcagggcataaaacacttcagagtaagaaaatgcagagg
gagaaaaaccataagaatggaaatgaggtgtctttgtctactgcagatgtggatgctgct
ctgaaatatgctgaagatgaagcagattacatggcattgaagaaagtcgaacaggaagag
gctgtagacaaccaagagtttactgaagatgccattgggagattggaagatgatgaattt
gtgaatgatgatgatatgaaggctgatgagcctacagaccatgagatgacaacttatagc
aaagatggtgcagtgaatttaaaagagaatggttgcattgaagagagagctgtaactctt
actggcaatgaagatgttgatatgttggctgatgtcaaacagatggcggcagcggcagcg
gctgctggacaagctatctcatcctttgagaatcagctacgtccaatcgaccgatatgca
gttcggtttctggaattgtgggatccaattatagacaaaggagccttggaatctcaagtt
ggttttgaggagactgaatgggagcttgatcgtattgagaagtacaaggaggaaatggaa
gctgagatggatgatgacgaggaaccattggtgtatgaaagatgggatgccgattttgcg
actgaggcataccgacaagaagttgaggcattaactcaacatcaactgttggaagaacag
gaagctgaagcgaatgacaaggaaggtgcagaagatgaacatttagatgctatggtcagg
tataaaatgccacgtaatcctaaatttaagtctaagaagaaaccaaagaaagccaagttc
aaatctctgaagaaagaatctttgacttctgaattgaaacacgtgaaagaggaggaatca
atggaaactttgtctgtagatgatgatgatgatggtacatattcagatacgatgtctcct
tgttccagcatgtggagaaagcgtaagaaagcagaatcagcaattggtattgacaaaacg
aggtcaaagaagaagactaagaaattcaaaaagggtcccgaaacatgcacttttaatgta
gattcagacctgtctggaaagcagcatgacaaatctatggaactaaaaccatatgaggtt
gtggtttctgatattgagcagaaaccagctagcaggagcaaaatgggagggaaaatatcc
atcagtaccatgccagtgaaacgggttttgatgataaagccagagaagttgaagaagggg
aatgtttggttgaaagattgtgttccaccacctgattcatggaagccacaggaggatgca
gttttatgtgctgttgtacatgaatatggtccacattggagcttggtcagtgaaactctg
tatgggatgactgctggtgggttttatcggggaagataccgccatccagttcattgttgt
gagagatttagggagctaatccacagatatgttttattttctccggaaaatcctattaat
aatgaaaagatgagcaacatggtctctgggaaggcccttctcaaagtaaccgaggataac
atacggatgttgttaaatgttgttgctgagcagccagaccatgagttacttctccagaag
cacttcacagccctgctttcttctgtgtggagggtgaaatctcgtgttgaaaatcaacaa
aacatgccatcatctcgaaatgccctttatgacagtggaagggttttcaattcttctgtc
aatccgttaccttggaactccttgagggaatcaggaaaaagaatgaaattcactaatttg
ggacagggtaccaagttgctggcagctgcactccatgatgccagcagtagaaggccaggt
gatagagtttccaattccaatgtgaatgaagaagctcctgctattggtgagaagctggaa
ataacattggaattccaaaaggaggaaaatgattatttggttccattcccacctctaata
agtttgtcaatacctggctcagcaccatggatgtctgtaaataaggatagagcggcggct
caccatctcagggcatccacaagcatagctgaaaatcgattcagggatgcagcaagagct
tcatcatctgtgttaccggcaaatgatttgaagttgttgctggcctcaaagactcagtcc
ttggggaagcacaagctatctgtctctgagtcaaccaagcctcctaggtcaaagacgagg
aaaactttgctggagcaaaatgaaggacacgccgagccaataatgcaaccactgtcagtt
agggatcccaaattaaggtttgacctgccaccagcagtcattcaggatgataaggatgag
ttttctatttcatgcatggaaaaggaactttcagtggaaacggggatctccgaagctgtc
ccgcataactatgttcctgatttgatatcgggtcttgatgattattctttgttgccagaa
tacaccgacattggatag
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integrated database retrieval system
