KEGG   Populus euphratica (Euphrates poplar): 105140876
Entry
105140876         CDS       T05872                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03082  ATP-dependent chromatin remodeling
peu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105140876
   03083 Polycomb repressive complex
    105140876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:peu03036]
    105140876
Enzymes [BR:peu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105140876
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105140876
   HDAC complexes
    Sin3A-HDAC complex
     105140876
    BRAF-HDAC complex
     105140876
    REST complex
     105140876
    SHIP complex
     105140876
    MiDAC complex
     105140876
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105140876
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105140876
  Chromatin remodeling factors
   NuRD complex
    105140876
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105140876
NCBI-ProteinID: XP_011046214
UniProt: A0AAJ6Y8D3
LinkDB
Position
Unknown
AA seq 467 aa
MEDITGGASLPSTGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYALHR
RMEINRPFPAGPTDIRKFHSDEYVEFLSSVSPQSVGDPAFGRQLKRFNVGEDCPVFDGLF
GFCQASAGGSIGAAVKLNRGDADIALNWAGGLHHAKRSEASGFCYVNDIVLGILELLKVH
RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGHIKDTGAGQGKNYALNIP
LNDGMDDENFRGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF
LRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVEP
SNVENLNSPKDMERIRNILLEQLSRLPNAPSVPFQTTPPTTEVPEEAEEDMDQRPKRRIW
NGEDFESDHDEDEKPEPRFFNADAQPNNKTRDGVDTMEEDKKEHPGL
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggaggacatcaccggaggcgcatctttaccatcaacaggaacagacgcaaaaaaacgc
cgagtcacctacttctacgaacccacaatcggcgactactactacggtcaaggccaccca
atgaaaccccatagaatccgtatggcccacaacttgatagtccactacgctctccaccgt
cggatggagatcaaccgtccgttcccagcaggtcctacagacatacgaaagttccattct
gatgagtacgtggaattcttgtcttcagtgtcgccacaatctgtgggtgatccagcattt
gggaggcagttgaagaggtttaatgttggtgaagattgtccagtttttgatgggttattt
gggttttgccaagcctctgctggtggttctattggtgctgctgttaagcttaatagaggg
gatgctgatattgctttgaattgggctggtggcttacatcatgcgaagaggagtgaggct
tctgggttttgttatgttaatgatattgttcttggcattcttgagttgctcaaagttcac
aggcgtgtactgtatgtagatattgatgtccaccacggagatggtgttgaggaggcattc
tacactactgacagggttatgacagtgtccttccataaatacggagatttctttccaggg
actgggcacattaaagacactggtgctgggcaggggaaaaactatgccctgaatattcca
ttaaatgatgggatggatgatgaaaatttccgtggtctgtttcggcctctaatccaaaaa
gtgatggaggtttatcaacctgatgcagttgttctccaatgtggtgcagattcgttgtct
ggtgataggttggggtgttttaatttgtctgttaagggccatgcagactgccttcgtttt
cttagatcttataatgttcctctgatggtcttgggtgggggtggctatactatcaggaat
gttgcccgttgctggtgctatgagacagctgttgcagttggggtggaaccagataataaa
ttgccttacaatgagtactttgagtactttggccctgattatacacttcatgttgagcca
tccaacgtggagaacctaaactcacccaaagatatggagagaataaggaacatcctgcta
gagcaactttctcgactgcctaatgctcccagtgtaccttttcaaacaacaccacccaca
actgaagttccggaagaggctgaagaggacatggatcaaagaccaaagcgtcgcatatgg
aatggtgaggattttgagtctgatcatgatgaagatgagaaacctgaacctagatttttc
aatgctgatgcacagccaaataataagacaagggatggtgtggatacgatggaagaagac
aagaaagagcatccagggttgtga

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