Populus euphratica (Euphrates poplar): 105141074
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Entry
105141074 CDS
T05872
Name
(RefSeq) uncharacterized protein LOC105141074
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105141074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105141074
03019 Messenger RNA biogenesis [BR:
peu03019
]
105141074
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105141074
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105141074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
PI-PLC-C1
Gln-synt_C-ter
DUF8009
Motif
Other DBs
NCBI-GeneID:
105141074
NCBI-ProteinID:
XP_011046467
UniProt:
A0AAJ6Y8J8
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MEPFFNSRRPRHHKQKGNTTPYNQQGFSANPSLTNSMQPQLGLVNPQIPTPFNHSNTPLR
NGQAMPNMPPLINQQHGLVSGPNDLAILQLQNQVNKLNALKMLMNQVNQLQGELFGPGFS
NLPQQINQNMGLLQNPMQNMMNPVMPMQMPMTSQVGSFNVPSSSHQVVGAQSPNFFVNQQ
VKPNQPNFVMPTTGANGSKQFSFENQQMQGNLSATQKNQNFVMPAVGTNGSNPLHVATQQ
VEGISPASQQSEKFAMPPMAANGPKPLPAATQQVQGNPFTSQQSQNLQPSAYNRWQGNPA
KNGQGSTPYPKRGIFSGKNFKNNPQREQSQSGHQKSEFHRMDNGKRKLGFSNKHGGKGKG
NERAAKFGRSDPSNQATEQKRTHIYTEQEIKQWRESRRKHFPTKTNIEKKQTEKLIDSGV
IDKEANFRRKQLKEILAKQAELGVEVAEIPPEYMLDSEKLGVEVAETPLSYLLDSEKLGV
EAAEIPPHHLLDSEKQEHGREDNRRSMTKKGRFWNKHDRRGRYKRKGRSDMQLGLENEDR
KPTLLEKLLCADIKRDKHRLLQVFRFMVVNSFFKDWSDKPLKFPLVAVKEDGCKDEPLEE
KPSLVGKEDSEVPNNTIAEDFGDRDDGDEHDAQVEPGNGFVMGKCDLVDEVYRVEEGEII
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaacctttcttcaattcccgtcgtcctagacaccacaaacaaaagggcaacactact
ccttataatcaacagggattttcagcaaatccttctttaacaaattcaatgcaacctcag
ctgggtttagtcaatcctcaaatcccaactccttttaatcattcaaatacccctttaaga
aatggacaagccatgcctaatatgccacctttaatcaatcaacaacatggtttagtgagt
ggacctaatgatctggctatccttcagttacaaaatcaggtcaacaagttgaatgcttta
aagatgttgatgaatcaagtaaatcaattgcaaggagagctgtttggtcctggtttctcc
aatttgcctcaacaaatcaatcaaaatatgggtttgttgcaaaatccaatgcagaatatg
atgaaccctgttatgcctatgcaaatgccaatgacttctcaagttggttcctttaatgtc
ccttcaagtagtcaccaagtggtaggtgctcaaagtccaaactttttcgtaaatcaacaa
gttaagccaaaccagccaaattttgtaatgccgacaaccggtgcaaatggatcgaaacaa
ttctcttttgaaaatcagcaaatgcaagggaacttgtctgcaacacagaaaaatcagaac
ttcgtaatgcctgcggtgggtacaaatgggtcaaatccattgcatgttgcaactcagcaa
gtggaagggatctcgccagcatcacaacaaagtgagaaatttgcaatgcctccaatggct
gcaaatggaccaaagcctttgccagctgcaactcagcaagtgcaagggaacccatttaca
tctcagcaaagtcagaacttgcaaccctctgcttacaataggtggcagggtaatcctgct
aaaaatggccagggtagtactccatatcccaaacgaggaatcttttctggcaaaaacttc
aaaaataatccacaaagagagcaatcacaatcagggcatcagaaatccgagttccatcgc
atggataatggaaagagaaagcttgggttttctaataaacatggtggaaaagggaaaggc
aatgagagggcagctaaatttggtcgctctgatccttcaaaccaagctacggaacagaaa
agaactcatatatacacggaacaagaaatcaaacaatggcgtgaatcacgtaggaagcac
ttcccaacaaaaaccaacatagagaagaagcagactgaaaagctaatagactctggggtc
attgataaagaggccaactttcgtcgcaagcaactcaaggagattttggcaaagcaggct
gagctaggagttgaagttgctgaaataccaccagaatacatgttagattcagagaagtta
ggagttgaagttgcagaaacaccactaagctatctgttagattcagagaagctaggagtt
gaagctgcagaaataccaccacaccatctgttagattcagagaaacaagagcatggaagg
gaagataacagaaggtccatgactaagaaggggagattctggaacaagcatgatagaaga
ggaagatacaagagaaaaggtcggtccgacatgcagcttggattagaaaacgaggatagg
aagccaacgctgttggagaagcttctttgtgcagatataaagagggataagcaccggttg
ttgcaggtttttaggttcatggtggtgaactctttcttcaaggattggtcagataagcct
ttgaagtttcctttggtagcggttaaagaagatggttgcaaggatgagccactggaagaa
aaaccttcacttgttggcaaagaagactccgaagttccgaacaatacaatagctgaggat
tttggtgatagagatgatggcgacgaacatgatgctcaagtggagccagggaatggtttt
gtcatgggaaaatgtgatcttgttgacgaagtttatagggttgaagaaggagaaatcatt
gactaa
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