Populus euphratica (Euphrates poplar): 105141261
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Entry
105141261 CDS
T05872
Name
(RefSeq) DNA damage-binding protein 1a isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03420
Nucleotide excision repair
peu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105141261
09124 Replication and repair
03420 Nucleotide excision repair
105141261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105141261
03400 DNA repair and recombination proteins [BR:
peu03400
]
105141261
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
105141261
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105141261
TCR (transcription coupled repair) factors
Cul4-CSA complex
105141261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
105141261
NCBI-ProteinID:
XP_011046741
UniProt:
A0AAJ6VFZ5
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTSSQELNLIIAKCTRIEINLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFIEGPWSQNNLDNGADLLIPVPPPFCGVLIIGEETIVYC
SANVFRAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDAKGSYVEVLDRYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVS
FISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTRELR
QEWNAPSGYSINVATANATQVLLATGGGHLVYLEIGDGTLTQAKHAQLECEISCLDINPI
GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFLLNLSTGELKDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFSICSMKNQSNAEESEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVI
KGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCKR
VEELTRLH
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatggaactatgtggtgactgctcacaagcccaccaatgtgacgcactcttgt
gtcggcaatttcaccagttctcaagagcttaatctcatcattgcgaaatgtacccgtatc
gaaatcaatctgcttactcctcagggattacagcctatgttagatgttccaatatatgga
cgaattgcaactctcgaacttttccggcctcatggtgaagctcaggactttttatttatt
gcaacagaaagatacaaattctgtgtacttcagtgggacgcagagacgtctgagctaatt
accagagcaatgggggacgtgtcagaccgtataggtcgcccaacagacaatggtcagatt
ggcataattgatcctgattgtagattaattggactccatttgtatgatgggttgtttaag
gtcattccttttgataataaaggacagctcaaagaggcttttaacataaggcttgaggaa
cttcaagttttggatatcaaatttcttcatggttgttcaaaaccaacgattgttgttctt
taccaggataacaaggatgcccgtcatgttaaaacatatgaggttgctttgaaagataaa
gactttattgagggtccttggtcgcagaacaatcttgacaatggtgctgatttgctaata
ccagttcccccacctttctgtggtgttcttattattggagaagaaacaattgtatattgc
agcgccaatgtttttagagcgatcccaatcagaccttctataacgaaagcatatggaaga
gttgatgctgatggttctaggtatttacttggtgatcatgctgggcttcttcaccttcta
gtcataacccatgagaaagaaaaggtcactggcctcaaaattgagctattgggagaaact
tctatcgcatctaccatatcatatctcgacaatgcttttgtctttattggttcaagctac
ggagattcacagcttgtaaagttaaatctgcaacccgatgcaaaaggttcatatgtagaa
gttctggacaggtatgtcaatttgggaccaattgttgacttctgtgtggtggacctggag
cggcaaggccaaggtcaggttgtcacttgctctggagcctataaggatggttctcttcgg
atagttcgtaatggaataggaatcaatgaacaggcatctgtagagcttcaaggcatcaaa
ggaatgtggtcattaagatctttgactgatgatccatttgacacctttctggttgtaagt
tttattagcgagacaagaattttggcaatgaacattgaggatgagttggaggaaactgaa
atagagggtttctgttcacaagtgcagacattgttctgccattgtgctgtgttcaaccag
cttgttcaagttacatcaagctctgtaagactggtcagttccacaactagagagctcaga
caggaatggaatgctccatcaggttattcaataaatgtcgccactgctaatgccacccag
gttttattggcaactggtggtggccaccttgtctatctggaaatcggtgatgggacactg
acacaggcaaaacatgcacagttagagtgtgagatatcatgcctggacattaaccccatt
ggagagaatcccaactatagtcaactagctgcggttggaatgtggacagacataagtgtc
aggatattttcattgcctgatctaaatctcataacaaaggagccattgggaggagagata
ataccccgttctgttcttctatgttcctttgaagggatatcgtatttattatgtgccctt
ggagacggacacctcttgaacttcctactgaacttgagtactggcgagttgaaagatagg
aaaaaggtgtctttggggacccaacctataacactccgtactttctcatcgaagaatacc
acacatgtatttgctgcatcagataggccaactgtcatttacagcagcaacaagaaacta
ctttacagcaatgtaaacttgaaagaagtcagccatatgtgtccttttaactctgctgca
tttccagacagccttgctattgcaaaagaaggggaacttagcattggcaccattgatgat
atccaaaagcttcacatccgctctattccattgggtgaacatgcacggcgtatatgtcac
caggagcagtctcggactttctccatttgtagtatgaaaaaccaatccaatgcagaagaa
tctgaaatgcattttattcgattgttagatgatcagacctttgagttcatatcaacatac
ccacttgacacattcgagtatggctgctccatacttagctgctccttttctgatgatagc
aacgtgtactattgtgttggaactgcgtatgttttgccagaagaaaacgagccaaccaag
ggccgaatactggttttcatagtggaagatgggaagttgcagcttattgctgagaaggaa
acaaagggggcagtatactctttgaatgctttcaatggcaaactgctggctgctattaat
caaaagatccagttatacaagtggatgctccgagatgatggaacacgtgagctgcagtct
gagtgtgggcatcatgggcacatactagccctctatgtacaaactcgtggagatttcatt
gttgttggtgatctgatgaagtcaatctccttgctaatctataagcatgaggaaggtgct
attgaggagcgagcccgtgattataatgcaaattggatgtctgcagttgagattcttgat
gatgacatttaccttggtgctgaaaataactttaacctattcacagttcggaaaaatagt
gaaggtgccactgatgaggaacgaggccgtcttgaggtggtcggtgagtatcaccttgga
gaatttgtaaatcgattccgacatggttcccttgtcatgcgcttgccagattctgatgtt
ggccagatcccaactgtcatttttgggactgttaatggtgtaattggggtcattgcttca
cttcctcatgagcaatacctctttttggagaagctgcagtcaaacttaagaaaggtgata
aagggtgtcggaggattgagccatgagcaatggagatcattcaacaacgagaagaaaact
gtagatgccaagaatttcttggatggagatcttattgagtcattccttgatctcagccgt
agtcggatggatgagatatccaaggcaatggagatctccgtggaggagctttgtaagaga
gtggaagagctgacaaggctgcattga
DBGET
integrated database retrieval system
