Populus euphratica (Euphrates poplar): 105141262
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Entry
105141262 CDS
T05872
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105141262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105141262
04121 Ubiquitin system [BR:
peu04121
]
105141262
03036 Chromosome and associated proteins [BR:
peu03036
]
105141262
03400 DNA repair and recombination proteins [BR:
peu03400
]
105141262
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105141262
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105141262
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105141262
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105141262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-HC5HC2H
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_6
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-HC5HC2H_2
RTT107_BRCT_5
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105141262
NCBI-ProteinID:
XP_011046744
UniProt:
A0AAJ6VFJ5
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MIRSAVSESSSHYQTSIQRERRASYKMGDPTHLEKMGRELKCPICLSLFDTAVSLTCNHV
FCNSCIVKSMKSGSDCPVCKVPYRRREVRAAPHMDNLVSIYKSMEIASGFNIFVTQNQPP
STKLSDVQKQVGDDTDRGREDIGWICQDMLEEQLDISRQKDSRKLDESNMELCGPIKSKP
SFPTKKRVQVPQCSLSGTSAQPEKLQTGSREIKKYDFKNDSSVSRKNPVVDGKGERMLSP
FFWLRDEDGEKSSQHTDLDQLLDITPPNVPTFSDIKDSDDENPPESSSKGAACGNESHVA
DFFDSEMFEWTQRACSPEIFSSPAKMQAEKTHKVDANTNEERSAESKNCTDTKPRVGISE
DILANLSSPIVKSANYQIGRNTSKKRGRNAKNTTLRNCARKNADKDGRLKGENVSSVSVR
ENLDQADENKVTGQLSISFDKKQGRSNLKRKKNGKESRKISLRCKERKLDSVEINMIKGV
YSIHNQMDKDEHAHDYFLPVPVLEDKKPSEVKGKPGKQGEEVRSALCPEHNQELKCKKNM
EVSLDGIIEDGLVNDHQEGADNVFAEEAQSTENITGNTARATESAEKVQASLNTGILDDL
ATLKDHCQENGAAMLNCKLNYIIQCAFCLSSEVSEASGEMIHYNNGIPVGADYNGGSRVI
HSHKNCAEWAPNVYFEGDNAINLEAELARSRRIKCCCCGLKGAALGCYEKSCRKSFHVPC
AKWTHQCRWDTENFVMLCPLHASCKLPNESKQSQERRKNCISKGQTPRQYNQVTFKHDIN
MHKSRKSCLTDDKLVLCCSALTVGEKEIVSEFESLSGVTVLKNWDSSVTHVIASTDENGT
CRRTLKVLMGILKGKWIVNIEWVKACIKAMKFVEEMRYEITADVHGIRDGPRNGRLRVLN
KQPNIFEGFKFYFMGDFIPSYKGYIQDLLVAGGGTILHRKPISGAQGTFVLDSEPPTFII
YSLEMPDKWDPSKKNMILNRRQSDAEALASSTGAKAVSNKWVLNSIAACKLQSLAQ
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgataaggagcgccgtcagtgagtcttcttctcactatcaaacttcaatccagagagaa
aggcgagcgagttacaaaatgggagatccaactcacctcgagaaaatgggcagggagctc
aagtgccccatctgcttaagtctttttgacactgcagtctcgcttacatgcaatcatgtt
ttctgcaattcatgtattgtgaaatcgatgaaatcaggttccgattgtccagtctgtaaa
gtgccataccggcgcagagaggttcgcgctgctcctcatatggataacttggtcagcatt
tacaaaagcatggaaattgcttcaggattcaatatattcgtcactcagaatcaaccacca
tcaactaaattatcagatgtacaaaagcaagtaggagacgatacggaccgtggcagagaa
gatattggttggatttgtcaggatatgctggaggagcaacttgatatatccagacaaaaa
gattcaaggaaacttgatgaatccaacatggaattatgtggtcccattaaatcgaaacct
tcgtttccaaccaagaaaagagttcaggtgccacaatgctctctttcaggcacatcggca
caacctgagaagctacaaactggatcaagagaaataaaaaaatatgacttcaaaaatgat
tcatcagtctcaaggaagaaccctgttgtcgatggaaagggagagcgcatgctatcgcct
ttcttctggttgagagatgaagatggagagaagtcaagtcagcatactgacctggatcag
cttctggatatcacaccaccaaatgttcctactttcagtgatatcaaagactcagatgac
gaaaacccccctgaatcatcctcgaaaggggcagcgtgtggcaacgaatcacatgttgca
gatttttttgacagtgagatgtttgaatggacgcaacgagcttgctctcctgagattttt
tcaagcccagcaaagatgcaggctgaaaaaacacacaaagtggatgcaaatacaaatgaa
gaacgtagtgctgaaagcaaaaactgcaccgataccaaaccgcgagtgggtatttctgaa
gacatactggccaatctatcctctccaatagttaaaagtgcaaattaccaaatcgggcgt
aatacttccaagaagagaggcaggaatgctaagaacacaacattaaggaattgtgctcgg
aagaatgcagataaggatggtaggttgaaaggagagaatgtttcttctgtttcagttaga
gaaaatttggaccaggctgatgaaaacaaggttactggtcagctgtctatttcatttgat
aagaaacaaggtcgcagtaatcttaaaaggaagaagaatggaaaagagagtagaaagatc
agtctccggtgcaaggaacgaaagctggattctgttgagataaacatgattaaaggagtc
tattcaatacacaaccaaatggacaaagatgaacacgcccatgattactttttacccgtc
cctgtgcttgaagataaaaagccctcagaagtcaaggggaaacctggcaaacaaggggaa
gaagtcaggtctgcattgtgtccagaacataatcaagaattaaaatgtaagaaaaacatg
gaagtttcattagatggtatcatagaagatggattagtcaatgaccatcaagaaggtgct
gacaatgtctttgcagaggaagctcagtccactgaaaatattaccggcaacaccgcaagg
gcaactgaatctgctgagaaggttcaagccagtcttaatactggaattcttgatgatttg
gcaacattaaaggatcattgccaagaaaatggagcggccatgcttaactgcaaacttaat
tatattattcaatgtgctttctgtctttcttcagaagtctcagaggcttcaggagagatg
atccactacaacaatggcatacctgtgggggcagattataatggtggatccagggtcata
cactctcataaaaactgtgctgagtgggcacctaatgtctacttcgagggtgataatgca
attaaccttgaagctgaattagctagaagtcggagaattaagtgttgctgctgtggactc
aaaggtgctgctcttggatgttacgagaagagttgtcgcaagagtttccatgttccttgc
gcaaagtggacccaccaatgtcgatgggatactgaaaattttgtcatgttatgccctctt
catgcttcttgtaagttgcctaatgaaagcaaacaatctcaagagaggagaaaaaactgc
atttcaaaaggacaaacaccaaggcaatacaatcaagttactttcaaacatgacatcaat
atgcataaaagtcggaaatcatgtttaacggatgacaagttggttctttgctgttcggct
ctcacagttggagaaaaggaaattgtttctgagtttgagagtttatctggagttacagtc
ttgaagaattgggattcaagtgtcactcatgtcattgcatcaacagatgaaaatggaaca
tgcagaagaacccttaaagttttgatgggtatcttgaaggggaagtggatagtgaacatt
gaatgggtcaaggcttgtatcaaagccatgaaatttgttgaagagatgcgatatgaaatt
actgctgatgttcacggaatcagggatggtccacgaaatggaagactaagagtcctgaac
aagcaaccaaacatttttgagggatttaagttctatttcatgggagattttattccttct
tacaagggatatatacaagatcttttagttgctggtggaggaacaattctgcacagaaaa
cccatttcgggagcccagggaacctttgtactggactctgaacctccaactttcataata
tacagcctcgagatgcctgataaatgggatcctagcaagaagaatatgatattaaaccga
aggcagtctgatgcagaagctctagctagttcaaccggagcaaaggcggtaagcaataaa
tgggttttgaactctatagcagcctgcaaattgcaaagtttggctcaataa
DBGET
integrated database retrieval system
