KEGG   Populus euphratica (Euphrates poplar): 105141480
Entry
105141480         CDS       T05872                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu04120  Ubiquitin mediated proteolysis
peu04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105141480
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    105141480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:peu04121]
    105141480
Enzymes [BR:peu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105141480
Ubiquitin system [BR:peu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105141480
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105141480
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd EIF3I zf-C3HC4_2 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C zf-C3HC4 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_WDR75_1st zf-C3HC4_3 zf-RING_2 WD40_like zf-RING_UBOX Beta-prop_DCAF12 zf-C3HC4_4 zf-RING_5 Beta-prop_SCAP Beta-prop_WDR35_TULP_N U-box WDR90_beta-prop_4th zf-rbx1 DUF1664 Beta-prop_IFT122_2nd zf-RING_6 zf-RING_10 Baculo_p24
Other DBs
NCBI-GeneID: 105141480
NCBI-ProteinID: XP_011047014
UniProt: A0AAJ6VG26
LinkDB
Position
Unknown
AA seq 602 aa
MGGESSMGALVPSVNSKGTNSKMQPPTEELDKDMLCPICMQIIKDAFLTSCGHSFCYLCI
TTHLRNKNDCPCCYHYLTNNHIFPNFLLNKLLERTYARQAAKNASPYEHLRQALQQGCEV
SVKELDGLLTLLAEKRRKMEQEEAERNMRILLDFLCSLRKQKLDELNEIQTDLQYIKEDI
NAVERQRIELCRAKDRCSLKLRMFADDPNSLFVTQSGPVASKKKWAQAQFNDLQECYLQK
RRNWVRQAYKEEEKDTDIMNREGYNPGLEDFQSVLTNFTRYSRLRAVAELRHGDLFHSAN
IVSSIEFDRDDELFATAGVSRRIKIFEFSSVMNEPADVHCPVVEMSTRSKLSCLSWNKYT
KNHIASSDYEGIVTVWDVTTRQSIMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKIWC
TQQEASVLNIDMKANICSVKYNPGSSIHVAVGSADHHIHYYDLRNISQPLYVFSGHRKAV
SYVKFLSSNELASASTDSTLRLWDVKDNLALRTFRGHTNEKNFVGLTVNSEYIACGSETN
EVFVYHKAISKPAAWHRFSTDLENGEDDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL
AE
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgggtggagagagctctatgggggcacttgtcccctctgtgaattctaagggaacaaac
tccaaaatgcaaccaccaacggaggagttagacaaggatatgctctgtcctatttgcatg
cagataattaaggatgcttttctcacttcctgtggacatagcttctgttacctgtgtatt
actactcatttaagaaacaagaatgattgtccttgttgttatcattacctcaccaacaac
catatctttcctaattttttgctcaataagttattggagagaacgtatgctcgtcaagca
gccaagaatgcatcaccttacgaacaccttcgccaggcattacaacagggttgtgaagtc
tcagttaaagagctagatggccttttgaccctccttgcagagaagaggagaaagatggag
caagaagaagcagagagaaatatgcggattttgcttgacttcttgtgcagcctcaggaag
caaaagcttgatgagctcaatgagattcaaacagacctgcagtacattaaggaggacata
aatgctgtagagaggcaaaggatagagctatgcagggcaaaggacagatgctcactgaaa
cttaggatgtttgctgatgatccgaattctttgtttgttactcaatcaggaccagttgca
tctaaaaagaaatgggcccaagcacagttcaatgatttgcaagaatgttacttgcaaaag
cggagaaattgggttagacaagcatataaagaggaagaaaaggatacagatattatgaac
agagaagggtataatccaggtcttgaggatttccaatctgtgctgaccaattttactcga
tacagtcgattgagggccgttgctgaactgagacatggtgaccttttccactctgctaat
attgtgtcgagcatagaatttgatcgtgatgatgaactgtttgctactgctggagtttct
aggcgcattaagatttttgagttttcctcggtgatgaacgaaccggcagatgtgcattgt
cctgttgtggaaatgtccacgcgatctaaacttagttgcctaagttggaacaagtatacg
aaaaatcatattgctagcagtgattatgagggtatagtaactgtttgggatgtaactact
cgccagagcataatggaatacgaggagcatgaaaagcgagcttggagtgttgatttttca
cggactgaaccttcaatgcttgtatctggcagcgatgactgcaaggtcaaaatttggtgc
acccagcaagaagcaagtgttcttaacattgatatgaaggcaaatatttgttctgtcaag
tataatcctggatccagcattcatgtggcggtgggatctgctgatcatcatattcactac
tatgacttgagaaacattagccaaccgctttatgtatttagtggacatcggaaagctgtt
tcatatgtgaaattcctgtctagcaacgaactggcttctgcatctacggatagcacattg
cgattatgggatgtaaaggataatctagcattgcggacatttagaggccatacgaatgag
aagaattttgtgggtctcacagtgaacagcgaatacattgcttgcggcagcgaaacaaac
gaagtgtttgtgtatcacaaggccatctctaaaccggcagcttggcatagatttagtacg
gatttggagaacggtgaggatgatgctggatcgtatttcattagcgctgtgtgttggaaa
agtgatagccctacaatgctaaccgcaaatagtcaaggaaccattaaagtgcttgttctt
gctgaatga

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