KEGG   Populus euphratica (Euphrates poplar): 105141557
Entry
105141557         CDS       T05872                                 
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105141557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peu03021]
    105141557
   03041 Spliceosome [BR:peu03041]
    105141557
   03036 Chromosome and associated proteins [BR:peu03036]
    105141557
Transcription machinery [BR:peu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     105141557
Spliceosome [BR:peu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105141557
 Complex B
    105141557
 Complex C
   U2 SnRNP specific factors
    105141557
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     105141557
    TFTC complex
     105141557
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A
Other DBs
NCBI-GeneID: 105141557
NCBI-ProteinID: XP_011047104
UniProt: A0AAJ6VG87
LinkDB
Position
Unknown
AA seq 1397 aa
MAVSEEECSNAKVRSSSSPSSSSSSAPSNGVHYLAKSVLRGSAVLHAIYGHFRSSFSYDI
VFGKETSIELAIIGEDGIVQAICEQPLFGTIKDMAVVPWNDKFHARTPRVHGKDRLVVIS
DSGKLTFLTFCNEMHRFFPLTHIQLSNPGNSRHQLGRMLAVDSSGCFVATSAYEDQLALF
SLSASGGSEIIDERILYPPENEGNANVARSIQRPLTSGTIWSMCFISRDSSHPSKEHNPV
LAIILNRRGALLNELLLLRWDIRDHAISYISQFVESGPLAHDIVEVPRSNGFALMFRVGD
VLLMDLRDALHPRCVCRTSLNYFPLAVEEQNFVEDSRVTDFDDDGSFNVAARALLELQDY
DPMCIDGEGSNVKSTLKHACSWSWEPDNDKNPRMVFCADTGEFFMIEISCDAEDLKVNLS
DCLYKDLSCKTLLWVEDGFLAALVEMGDGIVLKMENESLQYVSPIQNVAPILDMSIVDYH
DEERDQMFACCGVAPEGSLRIIRSGIIVEKLLKTAPIYQGITGTWTVGMKVADLHHSFLV
LSFVEETRVLSVGLSFTDVTDLVGFQPDVCTLACGLVGDGLLVQIHQTAVRLCLPTKAAH
PEGIPLSSPVCSSWFPANMGINLGAVGHDLIVVSTSNPCFLYILGVRCLSPFHYEIFEMQ
HLRLLNELSCISIPQKYFERRRSSFMNHAVDSCAAALPVGVDTGNTFVIGTHKPSVEVVS
FVPGDGLRIIASGTISLTSSLGTAISGCIPQDVRLVLADRFYVLSGLRNGMLLRFEWPSA
SSMFSVEIPSHGCSLGSCMLSSDTAISNTAAISLEPEMLAVDSIDNTMDDLPINLQLIAT
RRIGITPVFLVPLSDSLDSDMIALSDRPWLLHAARHSLSYTSISFQPSTHATPVCSVECP
KGILFVADNSLHLVEMVHSTRLNVQKFHLGGTPRKVQYHSESKLLLVMRTELSNDNDTCS
SDICCVDPLSGSIVSSFKLERGETGKSMELVKIGNEQVLVIGTSLSSGPAIMPSGEAEST
KGRVIVLCLENLQNSDSGSMTFCSKAGSSSQRTSPFREIVGYAAEQLSSSSLCSSPDDTS
CDGVKLEETETWQLRFVSATSLPGMVIAICPYLDRFFLASAGNSFYVCGFANDNKRVKKF
AVGRTRFMIMSLTAYHTRIAVGDCRDGILFYAYHVESKKLEQLYCDPSQRLVAGCVLMDV
DTAVVSDRKGSIAVLSRSDRFECTGSPECNLTLNCAYYMGEIAMSIRKGSFTYKLPADDI
LTGCDGAITKMDASNNTIMASTLLGSIIVFIPLSREEFELLEAVQSRLVVHPLTAPVLGN
DHHEFRSRENPVGVPKILDGDMLAQFLELTSSQQEAVLSLPLGQLDTIKTNLKPFSTLPI
SVSQVVQLLERVHYALN
NT seq 4194 nt   +upstreamnt  +downstreamnt
atggcagtatcagaggaagagtgctctaatgcaaaggtcagatcatcatcatcaccatct
tcttcttcatcctctgcgccatctaacggcgttcactacttagctaagtccgttctgaga
ggcagcgctgttttacacgctatttacggtcacttccgttcctcgttctcttacgacatc
gtttttggcaaggagacgtcaatagagttggcgataataggggaagatggaattgtgcag
gcaatatgtgaacaacctttatttggcacgattaaagatatggctgttgtaccttggaat
gacaagttccatgcgcggactccacgggtgcatggaaaagaccgtttggttgttatatct
gattctgggaagcttacatttctcacgttttgcaatgaaatgcacaggttttttccttta
acacacattcaactttcaaatcctggaaactcaagacatcaacttggaagaatgctagcc
gtagattccagtggctgttttgtcgctactagcgcatatgaagaccaattggctttgttt
tccctttcagcatctggtggcagtgagatcattgatgagagaattctttatcctcctgaa
aatgaagggaatgcaaatgttgccagaagtatccagagaccactcacatctggtaccata
tggagtatgtgcttcatttcgagggattctagccatccaagtaaggagcataatcctgta
ctagccattattctaaataggaggggagcgctcctaaatgaactgctgttattgagatgg
gacattagagaccatgctataagctacatttcacagtttgttgaatctggaccgctagcg
catgacatcgttgaagttcctcgttccaatggatttgcacttatgttcagggttggtgat
gttctcctaatggatcttagagatgctctccacccacgttgtgtctgtagaacaagcttg
aattattttccccttgcagtggaggagcagaattttgttgaagacagtagagttactgat
tttgatgatgatggttcattcaatgttgctgcacgtgctttactggagcttcaagattat
gatcccatgtgtattgatggtgaagggagcaatgtaaaatcaactttgaaacatgcatgc
tcttggagttgggagccagataatgataaaaaccctaggatggttttttgtgcggacaca
ggagaattttttatgattgagatttcttgcgacgcggaagatcttaaagttaatctttca
gattgtctttacaaagacctatcatgtaagacacttttgtgggttgaagatggattcctg
gcagcacttgtggagatgggagatgggattgtcctgaaaatggaaaatgaaagcctacaa
tatgtaagtcctattcaaaatgttgcacccatcttggatatgtccattgtggattatcat
gatgaggagcgtgatcaaatgtttgcttgctgtggagtcgcacctgaggggtcattaagg
attattagaagtggtatcattgttgaaaagctactgaagactgctcctatatatcaaggc
attactgggacctggactgttggaatgaaagtagctgatttgcatcattcttttcttgtt
ctatcatttgttgaggagactagggtactctcagttggattaagttttactgatgtgacg
gatttggttggttttcagcctgatgtctgtactctggcatgtggtctggtcggtgatggg
ttgctggtccaaattcatcaaactgcagttagactttgtttgcctaccaaggctgcccat
ccagaaggtattcctttgtcttccccagtttgctcatcttggtttccagctaacatgggt
atcaatttgggggctgttggacatgacttgattgttgtttctacttctaatccttgtttc
ctatatattctcggggtgagatgtctttcaccatttcattatgaaatatttgaaatgcaa
catttgagattgctgaatgagttatcctgcatctccattcctcaaaaatattttgagcga
agacgatcaagttttatgaaccatgcagttgatagttgtgcagctgcccttccagttggg
gttgacactggcaatacctttgttatcgggacacataaaccttcagtggaagttgtgtct
tttgtgcctggtgatggcctaaggattattgcttctggaacaatatcattaacaagttct
ttgggaaccgccattagtggttgcatccctcaagatgtaaggcttgtactggctgatcgg
ttttatgttctttctggtttaaggaatggaatgttgcttcgatttgaatggccttctgcc
tcttcaatgttttcagtggaaattcccagtcatggatgttctcttggttcctgtatgcta
agttctgatactgctatatcaaatacagctgcaatttctttagagccagaaatgcttgct
gttgattcaattgacaacacaatggatgaccttcctattaatctgcaattgattgccacc
cgtcgcatcggcattactcctgttttcctggttcctttgagtgattctcttgactcagat
atgattgctctcagtgatcggccatggttattgcatgctgcaaggcacagcctctcttac
acttcaatctcctttcagccttcaacacatgcaacacctgtatgctctgttgaatgcccc
aagggaattttatttgttgcagacaacagtcttcatttggtggaaatggtgcatagcacg
aggcttaatgtgcaaaagtttcatcttggaggcactccacggaaggtccaataccatagt
gaaagcaagttgttacttgtaatgaggactgaactaagcaatgacaatgatacatgttca
tctgatatatgttgtgttgacccactgagtggttcaattgtgtcatcatttaaacttgaa
cgtggagaaacaggaaaatccatggagctggtgaagattggaaatgaacaggttctggta
attggaaccagtctgtcttctggcccagctatcatgcctagtggtgaagccgaaagtacc
aagggtcgagtaatagttctctgcctagaaaacttgcaaaattcagatagtggctcaatg
acattctgctcaaaggcagggtcatcttctcaacgaacatcaccatttcgtgaaattgtt
ggttatgctgctgagcagctatcaagcagtagtctttgcagtagcccagatgatactagc
tgcgatggagtcaaacttgaagaaactgaaacatggcagttgcgatttgtttctgccaca
tcattgcctggaatggtgattgcaatttgtccatatcttgaccgttttttcttggcatct
gctggtaattctttttatgtatgtggttttgcaaatgataataaaagagtgaaaaagttt
gctgttggaaggacacgttttatgataatgtccttgactgcatatcacaccagaattgct
gttggtgattgccgcgatggtatccttttctacgcttatcatgtggagtccaaaaaactg
gagcaactttattgtgacccgtctcagagattagttgctggttgtgtccttatggatgtt
gatacagcagtggtttcagatcggaagggaagcattgctgtgttgtcacgttctgatcga
tttgaatgtactggaagtccagaatgcaacttgacattgaattgtgcttattatatgggt
gagatagcaatgagcatcaggaagggatcatttacatataaactccctgctgatgatata
ttaacggggtgtgatggtgctattacaaagatggatgcatctaacaatactatcatggcc
agcacactcttaggaagcataatagtttttattcctctatcaagggaggaatttgaactt
ctagaagctgtccaatctagacttgtggtccatcccttaactgctcctgtcttaggaaat
gatcaccatgagttccgaagccgtgaaaaccctgttggagtgcccaagatacttgacggc
gacatgctagctcagttcctggagctaacgagctcacagcaagaggcagtgctatcatta
cctcttggacaactagatacaattaaaacaaatttaaaaccattttctaccttgcccata
tcagttagtcaggttgtgcaacttcttgagcgggttcattatgccctcaattaa

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