Entry |
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Name |
(RefSeq) splicing factor 3B subunit 3
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KO |
K12830 | splicing factor 3B subunit 3 |
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Organism |
peu Populus euphratica (Euphrates poplar)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:peu00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105141557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:peu03021]
105141557
03041 Spliceosome [BR:peu03041]
105141557
03036 Chromosome and associated proteins [BR:peu03036]
105141557
Transcription machinery [BR:peu03021]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105141557
Spliceosome [BR:peu03041]
Complex A
U2 snRNP components
U2 snRNP specific factors
105141557
Complex B
105141557
Complex C
U2 SnRNP specific factors
105141557
Chromosome and associated proteins [BR:peu03036]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105141557
TFTC complex
105141557
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1397 aa
MAVSEEECSNAKVRSSSSPSSSSSSAPSNGVHYLAKSVLRGSAVLHAIYGHFRSSFSYDI
VFGKETSIELAIIGEDGIVQAICEQPLFGTIKDMAVVPWNDKFHARTPRVHGKDRLVVIS
DSGKLTFLTFCNEMHRFFPLTHIQLSNPGNSRHQLGRMLAVDSSGCFVATSAYEDQLALF
SLSASGGSEIIDERILYPPENEGNANVARSIQRPLTSGTIWSMCFISRDSSHPSKEHNPV
LAIILNRRGALLNELLLLRWDIRDHAISYISQFVESGPLAHDIVEVPRSNGFALMFRVGD
VLLMDLRDALHPRCVCRTSLNYFPLAVEEQNFVEDSRVTDFDDDGSFNVAARALLELQDY
DPMCIDGEGSNVKSTLKHACSWSWEPDNDKNPRMVFCADTGEFFMIEISCDAEDLKVNLS
DCLYKDLSCKTLLWVEDGFLAALVEMGDGIVLKMENESLQYVSPIQNVAPILDMSIVDYH
DEERDQMFACCGVAPEGSLRIIRSGIIVEKLLKTAPIYQGITGTWTVGMKVADLHHSFLV
LSFVEETRVLSVGLSFTDVTDLVGFQPDVCTLACGLVGDGLLVQIHQTAVRLCLPTKAAH
PEGIPLSSPVCSSWFPANMGINLGAVGHDLIVVSTSNPCFLYILGVRCLSPFHYEIFEMQ
HLRLLNELSCISIPQKYFERRRSSFMNHAVDSCAAALPVGVDTGNTFVIGTHKPSVEVVS
FVPGDGLRIIASGTISLTSSLGTAISGCIPQDVRLVLADRFYVLSGLRNGMLLRFEWPSA
SSMFSVEIPSHGCSLGSCMLSSDTAISNTAAISLEPEMLAVDSIDNTMDDLPINLQLIAT
RRIGITPVFLVPLSDSLDSDMIALSDRPWLLHAARHSLSYTSISFQPSTHATPVCSVECP
KGILFVADNSLHLVEMVHSTRLNVQKFHLGGTPRKVQYHSESKLLLVMRTELSNDNDTCS
SDICCVDPLSGSIVSSFKLERGETGKSMELVKIGNEQVLVIGTSLSSGPAIMPSGEAEST
KGRVIVLCLENLQNSDSGSMTFCSKAGSSSQRTSPFREIVGYAAEQLSSSSLCSSPDDTS
CDGVKLEETETWQLRFVSATSLPGMVIAICPYLDRFFLASAGNSFYVCGFANDNKRVKKF
AVGRTRFMIMSLTAYHTRIAVGDCRDGILFYAYHVESKKLEQLYCDPSQRLVAGCVLMDV
DTAVVSDRKGSIAVLSRSDRFECTGSPECNLTLNCAYYMGEIAMSIRKGSFTYKLPADDI
LTGCDGAITKMDASNNTIMASTLLGSIIVFIPLSREEFELLEAVQSRLVVHPLTAPVLGN
DHHEFRSRENPVGVPKILDGDMLAQFLELTSSQQEAVLSLPLGQLDTIKTNLKPFSTLPI
SVSQVVQLLERVHYALN |
NT seq |
4194 nt +upstreamnt +downstreamnt
atggcagtatcagaggaagagtgctctaatgcaaaggtcagatcatcatcatcaccatct
tcttcttcatcctctgcgccatctaacggcgttcactacttagctaagtccgttctgaga
ggcagcgctgttttacacgctatttacggtcacttccgttcctcgttctcttacgacatc
gtttttggcaaggagacgtcaatagagttggcgataataggggaagatggaattgtgcag
gcaatatgtgaacaacctttatttggcacgattaaagatatggctgttgtaccttggaat
gacaagttccatgcgcggactccacgggtgcatggaaaagaccgtttggttgttatatct
gattctgggaagcttacatttctcacgttttgcaatgaaatgcacaggttttttccttta
acacacattcaactttcaaatcctggaaactcaagacatcaacttggaagaatgctagcc
gtagattccagtggctgttttgtcgctactagcgcatatgaagaccaattggctttgttt
tccctttcagcatctggtggcagtgagatcattgatgagagaattctttatcctcctgaa
aatgaagggaatgcaaatgttgccagaagtatccagagaccactcacatctggtaccata
tggagtatgtgcttcatttcgagggattctagccatccaagtaaggagcataatcctgta
ctagccattattctaaataggaggggagcgctcctaaatgaactgctgttattgagatgg
gacattagagaccatgctataagctacatttcacagtttgttgaatctggaccgctagcg
catgacatcgttgaagttcctcgttccaatggatttgcacttatgttcagggttggtgat
gttctcctaatggatcttagagatgctctccacccacgttgtgtctgtagaacaagcttg
aattattttccccttgcagtggaggagcagaattttgttgaagacagtagagttactgat
tttgatgatgatggttcattcaatgttgctgcacgtgctttactggagcttcaagattat
gatcccatgtgtattgatggtgaagggagcaatgtaaaatcaactttgaaacatgcatgc
tcttggagttgggagccagataatgataaaaaccctaggatggttttttgtgcggacaca
ggagaattttttatgattgagatttcttgcgacgcggaagatcttaaagttaatctttca
gattgtctttacaaagacctatcatgtaagacacttttgtgggttgaagatggattcctg
gcagcacttgtggagatgggagatgggattgtcctgaaaatggaaaatgaaagcctacaa
tatgtaagtcctattcaaaatgttgcacccatcttggatatgtccattgtggattatcat
gatgaggagcgtgatcaaatgtttgcttgctgtggagtcgcacctgaggggtcattaagg
attattagaagtggtatcattgttgaaaagctactgaagactgctcctatatatcaaggc
attactgggacctggactgttggaatgaaagtagctgatttgcatcattcttttcttgtt
ctatcatttgttgaggagactagggtactctcagttggattaagttttactgatgtgacg
gatttggttggttttcagcctgatgtctgtactctggcatgtggtctggtcggtgatggg
ttgctggtccaaattcatcaaactgcagttagactttgtttgcctaccaaggctgcccat
ccagaaggtattcctttgtcttccccagtttgctcatcttggtttccagctaacatgggt
atcaatttgggggctgttggacatgacttgattgttgtttctacttctaatccttgtttc
ctatatattctcggggtgagatgtctttcaccatttcattatgaaatatttgaaatgcaa
catttgagattgctgaatgagttatcctgcatctccattcctcaaaaatattttgagcga
agacgatcaagttttatgaaccatgcagttgatagttgtgcagctgcccttccagttggg
gttgacactggcaatacctttgttatcgggacacataaaccttcagtggaagttgtgtct
tttgtgcctggtgatggcctaaggattattgcttctggaacaatatcattaacaagttct
ttgggaaccgccattagtggttgcatccctcaagatgtaaggcttgtactggctgatcgg
ttttatgttctttctggtttaaggaatggaatgttgcttcgatttgaatggccttctgcc
tcttcaatgttttcagtggaaattcccagtcatggatgttctcttggttcctgtatgcta
agttctgatactgctatatcaaatacagctgcaatttctttagagccagaaatgcttgct
gttgattcaattgacaacacaatggatgaccttcctattaatctgcaattgattgccacc
cgtcgcatcggcattactcctgttttcctggttcctttgagtgattctcttgactcagat
atgattgctctcagtgatcggccatggttattgcatgctgcaaggcacagcctctcttac
acttcaatctcctttcagccttcaacacatgcaacacctgtatgctctgttgaatgcccc
aagggaattttatttgttgcagacaacagtcttcatttggtggaaatggtgcatagcacg
aggcttaatgtgcaaaagtttcatcttggaggcactccacggaaggtccaataccatagt
gaaagcaagttgttacttgtaatgaggactgaactaagcaatgacaatgatacatgttca
tctgatatatgttgtgttgacccactgagtggttcaattgtgtcatcatttaaacttgaa
cgtggagaaacaggaaaatccatggagctggtgaagattggaaatgaacaggttctggta
attggaaccagtctgtcttctggcccagctatcatgcctagtggtgaagccgaaagtacc
aagggtcgagtaatagttctctgcctagaaaacttgcaaaattcagatagtggctcaatg
acattctgctcaaaggcagggtcatcttctcaacgaacatcaccatttcgtgaaattgtt
ggttatgctgctgagcagctatcaagcagtagtctttgcagtagcccagatgatactagc
tgcgatggagtcaaacttgaagaaactgaaacatggcagttgcgatttgtttctgccaca
tcattgcctggaatggtgattgcaatttgtccatatcttgaccgttttttcttggcatct
gctggtaattctttttatgtatgtggttttgcaaatgataataaaagagtgaaaaagttt
gctgttggaaggacacgttttatgataatgtccttgactgcatatcacaccagaattgct
gttggtgattgccgcgatggtatccttttctacgcttatcatgtggagtccaaaaaactg
gagcaactttattgtgacccgtctcagagattagttgctggttgtgtccttatggatgtt
gatacagcagtggtttcagatcggaagggaagcattgctgtgttgtcacgttctgatcga
tttgaatgtactggaagtccagaatgcaacttgacattgaattgtgcttattatatgggt
gagatagcaatgagcatcaggaagggatcatttacatataaactccctgctgatgatata
ttaacggggtgtgatggtgctattacaaagatggatgcatctaacaatactatcatggcc
agcacactcttaggaagcataatagtttttattcctctatcaagggaggaatttgaactt
ctagaagctgtccaatctagacttgtggtccatcccttaactgctcctgtcttaggaaat
gatcaccatgagttccgaagccgtgaaaaccctgttggagtgcccaagatacttgacggc
gacatgctagctcagttcctggagctaacgagctcacagcaagaggcagtgctatcatta
cctcttggacaactagatacaattaaaacaaatttaaaaccattttctaccttgcccata
tcagttagtcaggttgtgcaacttcttgagcgggttcattatgccctcaattaa |