Populus euphratica (Euphrates poplar): 105141709
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Entry
105141709 CDS
T05872
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105141709
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105141709
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
105141709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
HHH_5
Cdd1
AAA_22
TTC3_DZIP3_dom
DNA_pol_lambd_f
IMS_HHH_1
HHH
Motif
Other DBs
NCBI-GeneID:
105141709
NCBI-ProteinID:
XP_011047325
UniProt:
A0AAJ6VFM4
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MREVTASSLPPKSSSSLYKYCLVHYSLIIALQKPNRNLLFLFRLYPAPASPEIRITKERT
SCSIMDSYALKSVSDLPPPFRSIFSFRYFNSLQSECFPVCYHSDVNMVISAPTGSGKTVL
FELCTLRLLSRFISEGRFVHVKGMLKTIYIAPSKALVQEKLRDWTQKFGSLGINCLELTG
DNEFYNTRTIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIGLLLIDEVHLLNDPRGAA
LEAIVSRIKMLAHNPEMKSSPLSCVRFLAVSATIPNIEDLAEWLNVPVQGIKRFGEEMRP
VKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMHYSRGKSALVFCSTRKGAQEGALKLSQT
AMTFGYSNPFIKDKEQQERLREASLSCSDKQLQSYILYGVGYHNGGLCLKDRSLIEGLFL
KGDIKILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTVLQMCGRAGRPPFD
DTGIVIIMTRRETVHLYENLLSGCEMVESQLLSCVTEHLTAEIVQLTVSDIARAIEWMKY
SYLYVRIKKNPEHYAVNKGISRDRIEKQMQEITVQKVNELSHHQMIWTDKDGFLLKPLEP
GRLMTRYYLKFNTMKHVMQTPENCSLEDALNVICHAEEIAWIQLRRNEKKLLNDINIDKD
CRIRFHINGDKQKRKKRIQTREEKIFVLANDCLTGDPSVHDLSLTQDMNSICSNGCRIAR
CMKEYFIFKRNYKGAINSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGIKSFD
TLAEADPRRIEILTGRKFPFGNHIKDSLLSLPPKVNMSIEENECHRRGMSKFVVTLTRLS
QPLQSSKRHYADMIVGTEEDNLIHFHEKIRVDEFSSPYSATILLSIPQQKKLTLKANLIF
EEYIGLDFHQKLLLMKESNPETNKNRCKQPSLFPPPGDVCVIDEESETTSYGPAEMHCNL
TKSKTINNSMPSFKLIDEDLELGVEGEPGFEIQNDSCKIISEQTIFEHIREKAKNFPLLT
TPSNVCSPSSEAMLLTRKRPRDKAIELDSEPNATEETEGSKISLALLNVTSEQGERERYG
HDSNKLMTPKHHTSPGRFVADLVDDSGGLPSKVETSGLNGPTQDTIFDHIRKKAQYFPAL
SRTMQFDSVAGTKEYSFENQPDFCITASQVVKEVNTDRSTGDTIIISDSETRRGIDAYST
EPGSWVKDDKFSRSPHGERGSSSAPPKVEMLPYDISMIKHNTRLAGSRNSTAYGRKKQSS
PNGSKRRCCSLEMAGKNSEVDSFLGFTSVFSFL
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaggtgactgcttcctctctcccgccaaaaagctcttcaagtctgtataaatat
tgcctagttcattactctttaattatagctctgcaaaaacctaatcgaaatcttctattt
ctctttcgcctttaccctgcccctgcgtctccagaaattaggatcaccaaggaaaggact
agttgttcgataatggattcgtatgcgctcaagtccgtgtcagatctaccaccgcccttt
cgttcgatttttagcttcaggtattttaattcattgcaaagtgaatgtttccctgtctgc
taccattcagatgtaaacatggtgatctcagcaccaaccggtagtggtaaaacagtgctc
tttgaactgtgcacactgaggcttctgtcaaggtttatctctgaaggcaggtttgtgcat
gtcaaaggaatgctaaaaacaatctacatagccccatctaaggctttagttcaagaaaaa
ctccgtgattggacccaaaagttcggatcactggggataaattgcctggagctgactggt
gacaatgaattctacaacacaaggactatacaagaagcagacattattctaactactcct
gagaaatttgatgctgtcactcggtatcgcataaaggatggtggcttgagctttttcagt
gacattggcctgcttcttattgatgaagttcacctactgaatgatcctcgtggagctgct
ttagaggcaattgttagtagaataaagatgctagctcacaatcctgaaatgaaatccagt
cctctatcttgtgttcgttttttagcagtttcagcaacaattccaaatatcgaggatctt
gctgagtggcttaatgttccagtccaaggtattaaaaggtttggagaagaaatgaggcct
gtaaagttgacaaccaaagtttttggctatgctcccgcaaaaaatgattttctatttgaa
aagcgccttcaaaactatatttttgatattttgatgcactattcaagagggaaatctgct
ctagtattttgctcgacaaggaaaggggcacaggaaggagcattgaaactatctcagaca
gcaatgacctttggttattcgaatcctttcattaaagacaaagaacagcaggaaaggcta
agggaagcttcgctttcatgcagcgacaaacaactgcagtcttatatcctatatggtgtt
ggttatcacaatggcgggctttgcctgaaagatcggagccttattgagggtctgtttctt
aagggtgatattaaaattctgtgcaccactaacacccttgctcatggaatcaacttacca
gcacatacagtagtcataaaatcaacacaacacttcaacaaggaaaaaggtctttatatg
gaatatgatcgttccacggtgctacagatgtgtgggagggcaggtcggccaccatttgat
gatacagggattgttataatcatgacaagaagagaaacagttcatttgtatgaaaatctc
ttgagtggatgtgaaatggtggaatcacaattgctttcatgtgtgacagagcacttgaca
gcagagatagtacagttgactgtttctgatattgcacgggcaattgaatggatgaagtac
tcgtacttgtacgttaggataaaaaagaaccctgagcattatgctgttaacaaaggaatt
tctagagaccgcatagaaaagcaaatgcaagagattactgttcagaaagttaacgagtta
tcacaccaccaaatgatctggactgacaaagatggttttctactgaagccactagagcct
ggacggttgatgaccaggtactatttgaaattcaacacaatgaagcatgtcatgcagacc
ccagaaaactgcagcttggaagatgcgcttaatgttatatgccatgccgaggaaattgca
tggatacaacttagacgcaatgagaaaaagcttctgaatgatatcaacattgataaagat
tgtcgaattcggtttcacatcaatggggataagcagaaacggaaaaagcgtattcaaact
agagaggagaagatatttgttttggcaaatgactgcttgactggggatccttctgttcat
gatttatccctaacccaggacatgaattctatatgttcgaatgggtgtagaattgctagg
tgcatgaaagagtattttattttcaaaaggaattacaaaggagccatcaactcaaccctt
ctagcaaaatcattatatcagaaactctgggatgatagtccatacttgctgaagcaatta
cctggcattggaatggtgactgctaaggctctacattcaatgggaattaaatcatttgac
acgctagctgaagctgatccaaggagaatagagattctcactggccgtaaattccccttt
gggaaccacatcaaggattctctcctatcattacctccaaaagtcaatatgagtattgag
gaaaatgagtgccataggcgaggcatgtctaagtttgttgtgacattgactaggctgtca
caaccactccagtcatctaaacgacattatgctgatatgattgtcggtacagaagaagat
aacctgattcactttcatgagaaaataagagtggatgagttctcaagcccctatagtgca
acaattctcctgtcaatcccgcaacagaaaaagctgactttgaaggctaatcttattttt
gaagaatacattggtcttgatttccaccaaaaacttctgttgatgaaggaaagcaatcca
gaaacaaacaaaaacagatgcaagcagccttccctgtttcctccacctggggatgtttgt
gtcatagacgaggaaagtgaaacgacatcttatggtccagctgaaatgcattgcaatttg
acaaaatctaaaacaataaacaattcaatgccaagtttcaaactcattgatgaggatctg
gaattgggagttgaaggcgagcctggttttgaaatccaaaatgacagttgtaaaatcata
tctgaacaaacgatatttgagcacatacgtgaaaaggccaagaatttccctctcttgact
actccaagcaatgtttgttctccctcatcagaggccatgctccttacaagaaaacgtcca
cgtgacaaggccattgaacttgatagcgaaccgaatgctacggaagagacagaaggaagc
aaaatctcactagctttgctcaatgtgacttcagaacaaggagagagagaacggtatgga
catgatagcaacaagctcatgactccgaagcatcacactagccccggaaggtttgttgca
gaccttgtggatgattcaggtgggcttccttctaaagttgaaacaagtgggctcaatggt
ccaacacaagatacaatatttgatcacataaggaaaaaagcccagtattttccagcgttg
tcaagaaccatgcagtttgactctgtagctgggacaaaggaatattcgtttgagaatcaa
cctgacttttgcattactgcttcgcaagttgtgaaagaggtcaacactgatagatctacc
ggagataccataatcatttcagattcggaaaccaggagaggcatagatgcatacagtaca
gagccaggatcatgggttaaagatgataaattttctcggagtccccacggagagcgcgga
agttcgagcgctcctccgaaagtcgaaatgttaccttatgacatttctatgataaaacat
aatacgcggctagcaggctcaagaaactccacggcgtacggcaggaagaagcagtcttct
ccaaacggatccaaaagacgctgctgctcattggaaatggctggtaaaaatagcgaagtg
gactcatttcttgggtttacgagtgtcttttcatttctctga
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