Populus euphratica (Euphrates poplar): 105141718
Help
Entry
105141718 CDS
T05872
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105141718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105141718
03009 Ribosome biogenesis [BR:
peu03009
]
105141718
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105141718
Spliceosome [BR:
peu03041
]
Complex A
U1 snRNP components
U1 related factors
105141718
Complex B
105141718
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105141718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105141718
NCBI-ProteinID:
XP_011047343
UniProt:
A0AAJ6VFA1
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MAATATASSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTLPKSVSSL
PITSSVQVHQSSHRGYNPSVKEDDRYGRANNAGSKPDAVTRSISNSNQNARGAAIQSENV
PNGTANGLSARVYGSSAGGSGLSGEAYRRRHEITVTGDEVPSPLTSFEATGFPSEILKEV
LNAGFSAPTPIQAQSWPIALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRSCNDPRLGPTV
LVLSPTRELATQIQVEAVKFGKSSRFSCTCLYGGAPKGPQLKELDRGADIVVATPGRLND
ILEMRRVSLNQVKYLVLDEADHMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIA
ADLLVNPVQVNIGNVDELVANKSITQYVELLAPLEKHRRLEQILRSQESGSKIIIFCSTK
KMCDQLARNLTRQFGAAAIHGDKSQSERDYVLSQFRTGRSPILVATDVAARGLDIKDIRV
VINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKHASDLIKVLEGANQQVPPEIR
DMASRGGGGMGRFRRWGSGSGGHDGGRSGRSDFGYGGRGSWGMSNSSSRPERGGGRGNDH
ESRDRYDRGYGDGHDKGHNHNRSPDKGSGWGDRSKGWNRDKSRSRSPDRHDRAPPVRSFH
QAMMEKGRASIPVQIQHERSRSPGGGGGGGSSFHKAIMERGRASPPRQVHRERSRSPYHG
SGGSFHKEMIEQSRSSSYHALQERGRSPSSGHDRGFNAGPRSYVGEEEEEGMIPADEDGM
IPPP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacagcgactgcgtcttccgtgggtccacggtatgcaccggaggacccgact
ctcccgaaaccatggagaggtttggtagatggtaaaaccggttacctttatttttggaat
ccagagaccaatgttactcagtatgagaggcccactctgccgaagtctgtttcgtcacta
cccattacttcttctgttcaagttcaccagtcttctcatcgggggtataatccctcggtt
aaggaagatgataggtatggaagagccaacaatgctggatcaaaacctgatgctgtaacc
aggagtattagcaatagtaatcagaatgcaagaggtgcagcaattcaatctgaaaatgtc
ccaaatggaacagccaatggactctctgctcgggtatatggatcatcagctggaggaagt
ggtttgtctggagaggcttatcgccgccgccatgaaataactgtcactggtgatgaagtg
ccctctcctctaacatcattcgaagctactggctttccttctgagattttaaaagaggta
ctcaatgcagggttttctgccccaactccaattcaggcacaatcatggccgatcgcattg
caaagtagagatatagtggccgttgccaagactggttcgggtaaaacactaggttaccta
attccaggctttatccatctcaagcgcagctgtaatgaccctcgactgggtccaacagtg
ctggtactgtcaccaacaagagaactggcaacacagatacaagttgaagctgtgaagttt
ggaaagtcatcaagattttcctgcacgtgcttgtatggaggagccccaaagggtccccag
ttaaaagaactagacagaggagcagatattgtggttgccactcctggtcgcttgaatgac
attcttgaaatgaggagagttagcctcaatcaggttaaataccttgtattagatgaggct
gatcacatgttggacatgggatttgaaccccagatacgaaagattgtaaaggaggtgcct
gctcgtcgccagaccctcatgtacacagcaacttggccaaaggaagttagaaaaattgca
gcagatcttcttgtcaatcctgttcaggttaatattggcaacgtagatgagcttgtggca
aacaagtcaatcacacagtatgttgaattattggcacccttagaaaagcatagacggtta
gagcagatattgcggtcacaagaatctggatcaaagattattattttttgttcaaccaag
aagatgtgtgaccaacttgctcgcaacctaactcgtcaatttggagctgctgctattcat
ggtgacaaatctcagagcgagagggattatgttctgagtcagttccgaactgggaggtct
ccaatacttgtagctactgatgtagctgctcgaggactagacattaaagatatcagagtg
gttatcaattatgacttccctactggagtggaagattatgttcataggattgggagaact
gggagggcaggggccactggagtggcctacacattctttggtgaccaggatgcaaagcat
gcttcagatctcatcaaagttctggaaggagcaaatcagcaggtccctccagagatacgt
gatatggcttcacgtggtggtggggggatgggaaggtttagacgatggggctctggctct
ggtggtcatgatggggggcgcagtggacgcagtgattttggttatggtggaagaggtagt
tggggaatgtccaactcttctagcagaccagaaagaggtggaggccgtggaaatgaccat
gagtcacgggacaggtatgatcggggatacggtgatggacatgataaaggccacaatcac
aatcggagccctgacaagggatcaggttggggtgatcgcagtaaaggttggaaccgtgat
aaaagccgtagtcggagcccggacaggcatgacagggctccaccagtgcgcagttttcac
caggcaatgatggaaaagggtcgggcttccatccctgttcaaattcagcacgagaggtct
cgatcacctggtggtggtggtggtggtggtagcagttttcacaaggcaataatggaaagg
ggtcgggcatccccaccacgtcaagtccaccgtgagaggtctcgatccccttatcatggt
agtggtgggagtttccacaaggaaatgatcgaacaaagtcggtcatcctcttaccatgcc
ctgcaggagcgggggagatcaccgagcagtggacatgatagaggatttaatgctgggcct
cgttcttatgttggagaagaagaggaggaaggaatgatcccagccgatgaagatggcatg
atacctcctccttga
DBGET
integrated database retrieval system
