Populus euphratica (Euphrates poplar): 105142018
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Entry
105142018 CDS
T05872
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105142018
04121 Ubiquitin system [BR:
peu04121
]
105142018
Enzymes [BR:
peu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105142018
Membrane trafficking [BR:
peu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105142018
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105142018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
Prok-RING_1
DZR
zf-Nse
zf-RING_Vps41
Zf_IFT144_1st
Anti-TRAP
Zn_ribbon_20
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105142018
NCBI-ProteinID:
XP_011047757
UniProt:
A0AAJ6Y9T0
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MSSTTGGVAQLYFCYKCNRTVTITPPATALSCPNCHEGFLEELDSPNPSPNPLDGGLGPA
LLLDDFASIFGGMNPTPRSSTTSTTTTNSSSASPLFQDPDGFNPFVFLQNYLQTMRAGGA
NIQFVIENNPGMGGMDPTGFRVPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAV
ENLPDVKVTEELMQSDSSQCAVCKDSFEPGEVAKQIPCKHIYHKDCITPWLELHNSCPVC
RYELPTDDQDYEQRKGDGSNGVNQNVGGGISSGGSFSDGDNSDGNAQTPRERRFRIPFPW
LFSSGSGRSAGSSAEASNSRSGDNNDGNSRGNTNFGSDTREEDLD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaccaccggcggcgtcgcgcaactctacttctgctacaagtgcaaccgaacg
gtaacaataactccaccagccaccgctctctcatgccctaactgtcacgaaggtttcctc
gaagaactcgattctccaaaccctagccctaaccctttagatggtggtctcggccccgcc
ctcttactcgacgacttcgcctccatttttggtggcatgaaccccactcctcgatcatcg
accacgtcaacaacaacaacaaactcctcctctgcgtcgccactatttcaagatcccgac
ggtttcaatcctttcgtgttcctgcaaaattacctgcaaaccatgagggccggcggagcg
aatattcagtttgtgattgaaaataatcctggtatgggcggaatggaccccaccggattt
cgtgttccggcgaatctcggagattacttcatcggaccagggttagaacaactaattcaa
cagcttgcggagaatgatcctaataggtatggaactccgccggccgcgaaatctgcggtt
gaaaatcttcctgatgtcaaggtaacagaggaattaatgcaatcggattcttcacagtgt
gcagtttgtaaggatagttttgagccaggggaggtagctaaacaaattccttgtaagcat
atctatcataaggattgtatcacgccttggcttgaattgcataattcgtgtccggtttgt
agatatgagttgcctaccgatgatcaggattacgagcagaggaaaggggatgggagtaat
ggggttaatcaaaatgtgggtggtggaattagcagtggtgggtcgtttagtgacggtgat
aatagcgatggaaatgctcagacaccgagagagaggaggtttaggattccatttccatgg
ctgtttagtagtggtagtggtaggtcggctgggtcgtcggcagaggccagcaatagccgg
agtggggacaacaatgatgggaattcaagagggaataccaactttggatctgacactaga
gaagaggatcttgattga
DBGET
integrated database retrieval system
