KEGG   Populus euphratica (Euphrates poplar): 105142066
Entry
105142066         CDS       T05872                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03082  ATP-dependent chromatin remodeling
peu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105142066
   03083 Polycomb repressive complex
    105142066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:peu03036]
    105142066
Enzymes [BR:peu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105142066
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105142066
   HDAC complexes
    Sin3A-HDAC complex
     105142066
    BRAF-HDAC complex
     105142066
    REST complex
     105142066
    SHIP complex
     105142066
    MiDAC complex
     105142066
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105142066
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105142066
  Chromatin remodeling factors
   NuRD complex
    105142066
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105142066
NCBI-ProteinID: XP_011047817
UniProt: A0AAJ6VHD3
LinkDB
Position
Unknown
AA seq 419 aa
MLDTNGGASLPSTGTDAEKRRVSYFYEPTIGEYYYGQGHSMKPHRIRMAHNLIINYALHH
RMEINRPFPAGPEDIGWFHSDDYVEFLSSVSPQSASDPAHGRQLKRFNIGEDCPVFYGLF
EFCQASAGGSIGCAVKLNRGDADIALNWAGGLHHAKRSEASGFCYVNDIVLGILELLKVH
KRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGHIKDIGVGKGKNYALNIP
LKDGMDDDCFRALFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF
IRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPEYTLHADP
SNMENLNTPKDMERIRNILLEQLSRLPNAPSVPFQTTPATTEVPEEDEENMDQRPKRHV
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgctggacactaatggaggcgcatctctaccatcaacaggaacagacgcagaaaaacgc
cgagtcagctacttctacgagcccacaatcggtgaatactactacggtcaaggccactca
atgaaaccccacagaatccgaatggcacacaacttgataatcaactacgctctccaccat
cggatggaaatcaaccgtccattcccagcaggtcctgaagacatagggtggttccattct
gatgattacgtggaattcttgtcttcagtgtcaccacaatcagcgagtgatccggcacat
gggaggcagttgaagaggtttaatattggtgaagattgtccggttttttatgggttattt
gagttttgtcaggcctctgctggtggctcaattggctgtgctgttaagcttaatagaggg
gatgctgatattgctttgaattgggctggtggcttacatcatgcgaagaggagtgaggct
tctgggttttgttatgttaatgatattgttcttggcattctcgagttgctcaaagttcat
aagcgtgtattgtatgtagatattgatgtccaccatggcgatggtgttgaggaagcattc
tatactactgacagggttatgactgtgtccttccataaatatggagatttctttccaggg
acggggcacatcaaggacattggagttgggaaagggaagaactatgccctgaatattcct
ttaaaagatgggatggatgacgattgttttcgtgctctgtttcggccacttatccaaaaa
gtgatggaggtttatcaacctgatgcagttgttctccaatgtggagcagattcattatct
ggtgataggttggggtgtttcaacctgtctgttaagggccatgcagactgccttagattt
attagatcttttaatgttcctctgatggtcttgggtgggggtgggtatactatcaggaat
gttgcccgttgctggtgctatgagacagcagttgcagttggggtggaaccagataacaaa
ttgccttacaatgagtattacgagtactttggccctgaatacacacttcatgctgaccca
tccaatatggagaacctaaacacacccaaagacatggagagaataaggaacatactgcta
gagcaactttctagactgcctaatgctcccagtgtacctttccagacaacaccagctaca
actgaagttccagaagaggatgaagagaacatggatcaaagaccaaagcgtcatgtatga

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