Populus euphratica (Euphrates poplar): 105142066
Help
Entry
105142066 CDS
T05872
Name
(RefSeq) histone deacetylase 6-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
peu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105142066
03083 Polycomb repressive complex
105142066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105142066
Enzymes [BR:
peu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105142066
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105142066
HDAC complexes
Sin3A-HDAC complex
105142066
BRAF-HDAC complex
105142066
REST complex
105142066
SHIP complex
105142066
MiDAC complex
105142066
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105142066
Heterochromatin formation proteins
Other heterochromatin formation proteins
105142066
Chromatin remodeling factors
NuRD complex
105142066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105142066
NCBI-ProteinID:
XP_011047817
UniProt:
A0AAJ6VHD3
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MLDTNGGASLPSTGTDAEKRRVSYFYEPTIGEYYYGQGHSMKPHRIRMAHNLIINYALHH
RMEINRPFPAGPEDIGWFHSDDYVEFLSSVSPQSASDPAHGRQLKRFNIGEDCPVFYGLF
EFCQASAGGSIGCAVKLNRGDADIALNWAGGLHHAKRSEASGFCYVNDIVLGILELLKVH
KRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGHIKDIGVGKGKNYALNIP
LKDGMDDDCFRALFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF
IRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPEYTLHADP
SNMENLNTPKDMERIRNILLEQLSRLPNAPSVPFQTTPATTEVPEEDEENMDQRPKRHV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctggacactaatggaggcgcatctctaccatcaacaggaacagacgcagaaaaacgc
cgagtcagctacttctacgagcccacaatcggtgaatactactacggtcaaggccactca
atgaaaccccacagaatccgaatggcacacaacttgataatcaactacgctctccaccat
cggatggaaatcaaccgtccattcccagcaggtcctgaagacatagggtggttccattct
gatgattacgtggaattcttgtcttcagtgtcaccacaatcagcgagtgatccggcacat
gggaggcagttgaagaggtttaatattggtgaagattgtccggttttttatgggttattt
gagttttgtcaggcctctgctggtggctcaattggctgtgctgttaagcttaatagaggg
gatgctgatattgctttgaattgggctggtggcttacatcatgcgaagaggagtgaggct
tctgggttttgttatgttaatgatattgttcttggcattctcgagttgctcaaagttcat
aagcgtgtattgtatgtagatattgatgtccaccatggcgatggtgttgaggaagcattc
tatactactgacagggttatgactgtgtccttccataaatatggagatttctttccaggg
acggggcacatcaaggacattggagttgggaaagggaagaactatgccctgaatattcct
ttaaaagatgggatggatgacgattgttttcgtgctctgtttcggccacttatccaaaaa
gtgatggaggtttatcaacctgatgcagttgttctccaatgtggagcagattcattatct
ggtgataggttggggtgtttcaacctgtctgttaagggccatgcagactgccttagattt
attagatcttttaatgttcctctgatggtcttgggtgggggtgggtatactatcaggaat
gttgcccgttgctggtgctatgagacagcagttgcagttggggtggaaccagataacaaa
ttgccttacaatgagtattacgagtactttggccctgaatacacacttcatgctgaccca
tccaatatggagaacctaaacacacccaaagacatggagagaataaggaacatactgcta
gagcaactttctagactgcctaatgctcccagtgtacctttccagacaacaccagctaca
actgaagttccagaagaggatgaagagaacatggatcaaagaccaaagcgtcatgtatga
DBGET
integrated database retrieval system