| Entry |
|
|---|
| Name |
(RefSeq) regulator of nonsense transcripts UPF3-like isoform X1
|
|---|
| KO |
| K14328 | regulator of nonsense transcripts 3 |
|
|---|
| Organism |
peu Populus euphratica (Euphrates poplar)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:peu00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105142111
03015 mRNA surveillance pathway
105142111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:peu03019]
105142111
Messenger RNA biogenesis [BR:peu03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105142111
mRNA cycle factors
P-body specific factors
105142111
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
518 aa
MKVGQSDKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSFRPGKSSQKHQSCSRAYID
FKRPDDVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYL
EFLEFIAKPVENLPSAEIQLERREAERAGVAKDAPIVTPLMDFIRQKRAAKSGPRRILSN
GKPSRRAGGSGSPSSSSSKRGSEKKRGSTTMYVLRDTAKGTSGKEKSIYAQVPKLDDRRL
SKAVTLGSGSGTEVSEEETAVSGITDTGKKKILLLKGKEKEISLVTGITSQQQSISTSDR
NIISSTALKSQRHESSGRVIKSILLHKDSRRIQSSGVQSEPQMQTSNLEKDKRPPRPPHT
LVLKDANGTPDDQAVANDLHGFPNEKQERRTRNKDRPDRVVWTLRRSEGSCASDESLSSS
ASLSTQSGFDSSQVNHGDVKVDTLNLRSGEVKALGSGRSNHSSLDNGSQKHSGRRGPPHP
VRDADGSTVEGKTVKRGGASGYGSHEKQVWVQKSSSGS |
|---|
| NT seq |
1557 nt +upstreamnt +downstreamnt
atgaaggttggtcagtctgacaagaccaaagtggtggtccgccacttgccaccgggggtt
tctcagccgatgttcgtcgagcaaatcgaccttgctttctctggccgttacaactggctc
tcctttcgtcctggcaagagcagccagaagcatcaatcctgttctagagcctatattgac
tttaaaaggcctgacgatgttattgactttgctgagttctttaacggccacctatttgtt
aatgagaaaggcactcagtttaaagctattgtcgagtatgctccttcacagcatgtccca
aagcagtggtctaagaaagatggtcgtgaaggcaccatattgaaagatcctgagtatttg
gagttccttgaatttattgcaaagcctgttgagaatcttccaagtgctgaaatacagttg
gagagaagagaagctgaaagagctggtgttgcaaaagatgctcccattgttaccccttta
atggactttattcgacagaaaagagctgctaagagtggacctcggaggattttgtccaat
gggaaaccaagcagaagggctggtggcagtggaagtccgagctcttcctcatcaaaacga
ggttctgagaagaagagaggttcgacaacaatgtatgtcttaagggacactgcgaaaggc
acaagtggaaaagagaaatcaatttatgcgcaggttcccaagctagatgatcggcgacta
tctaaagctgtaactttaggttctggatctgggactgaagtatcagaagaggaaactgca
gtttctggaattactgataccgggaagaagaaaatcctgcttctgaaagggaaagagaag
gagatttcactggttactggcatcacatcccagcaacagagcatatcaacatctgataga
aatatcattagttcgaccgcattaaagagccagcggcatgaatcctctggaagggtaatc
aaaagcatactcttacacaaggattcgcgtcgaattcaatcctctggagtccagtctgag
ccacagatgcaaacctcaaatctagaaaaggacaagcgtcctcctcggcccccacataca
ttggttttgaaggatgcaaatggaacaccagatgaccaggctgttgcgaatgatttgcat
ggttttccaaatgagaagcaggaaaggcgaaccagaaataaagatagacctgatcgtgta
gtgtggactctccgcagatcagagggatcctgtgcaagtgatgagtccttgtcatcatct
gcatctctatctacacagtcagggtttgattcttcacaagtaaaccatggagatgttaaa
gtggacaccttaaatttgaggagcggagaagtaaaagcacttggaagtgggcggagtaat
cattcttctttagataatggatcacagaaacattctggtcgtcggggaccaccacatcct
gtgagggatgctgatgggtccactgttgaggggaagactgttaaaagaggtggtgcttct
ggttatgggtcccatgagaagcaagtctgggttcagaagtccagttctggttcctag |
|---|
