Populus euphratica (Euphrates poplar): 105142234
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Entry
105142234 CDS
T05872
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peu03009
]
105142234
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
90S particles
Other 90S particles
105142234
Pre-60S particles
Other pre-60S particles
105142234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
RIX1
Imm3
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
105142234
NCBI-ProteinID:
XP_011048061
UniProt:
A0AAJ6VIH5
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MKHKKPEPVPETQLKNDTEICQQLLSRYSTSTAPQHRHLLATAAALRSILTAESLPLTPS
AYFSAAINNLSDSKTLDSTAIAALLSFVSIVVPLIEEKGIKDAKVKEAVAVLVEVAAERE
GVGVGSLGCVVKCLGVMILGFCDLEKWDSVKAGFESLIKFSVDKRPKVRRSAQECLEKVF
KSFRSSSVVKEASKLVFSLFKNYMPVALTLSESRIFDESKEETLSKLEHLEVIHMLNLLK
VTVPYLSVKISSKVLPELVKLLRSDFSVLTRQIFQNIEAFFVSSSDEVIGPHQENIIDSL
SGYLSLGQKNPVDTVLSAATLLRTILDKLRAGGSSSWMSNGHKIFGSTAGLLTDEATASQ
ASDIMKELINHYIDPKEVVINESQSLDDSSQESEEANMIKLTCAVMENILNSCDGIPNEH
LLGVISVLFKKLGDISHIFMKNIILKLADLMNDVGCDKPDTNHLQNCMGSAVVAIGPENL
LMLLPISIDPDNFTCSNIWLVPILKDHVVGASLGYYMEHIVPLAKSFKQAGQKVRKSVIG
QDLQAHAHGLWGLLPAFCRYPVDTHKKFGALAELMITSLKKYSFMHQNIAVALQVLVNQN
RSVMLSKSDGGASNDNEVKVSVLECQNVATCSKKTATKNIKALASCSSKLLHALADLFVD
SQSGKPSYIKDAIACLASISNSSVTQKVFMSLLKRFRFVTGEGEFQQPKSDGDELIEEEV
RNLNVQEKDVHRCVMMELASSLVVGAKTDFIDLIYNFVVFIFRATDVTGHCEAYHTLSRI
LQEHAWFCSSRFVELIDLLLGLKSPADVATLKNRFACFHILIVHALEMNSEEKNTKAFLM
LNEIILILKDAREEARKVAYDTLLFISSSLCNSSCATSREAYQRLINMITGYLSGSSPYI
TSGAVSALSVLLYNDTEICLKVPDLVPSLLSLLQNKALEVIKAVLGFTKVLVSCLHAKDL
QNFLSDIIIGVLPWSSVSRNHFRSKVTVILEIMIRKCGSSAVELDIPEKHKSFFKTVLQN
RHHKSTSKEAGKNETEKTPADISPKRVRKPKNKELGSVPGRTGSVHPGKRKREKKHNENP
PTSSKPGISTGDGSGREGAKRARHFEHEKSIKVRSEDGWKKRNFNKEQTGDGKRKMEHRD
TNKKGKASFRGPSSASKLHKPQKAWKKQKLNN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaaaaacccgaacccgtacctgaaacccaattgaaaaacgacacagaaatc
tgccaacaactactctcccgatactccacctctacagcaccgcagcaccgccacctcttg
gcaactgccgccgcactccgttccatacttaccgccgaatcacttcctttaactccctcg
gcttacttctctgccgcaatcaacaatctctccgattcgaaaactctagactccacagca
attgcggcgttactttcgtttgtttcgattgtggtgcccttgattgaagagaaggggatt
aaggatgcgaaggtgaaggaggcggtggcggtgttagtggaagttgcggcggagagagaa
ggagtgggagtggggagtctgggctgtgtggtgaagtgcttgggggttatgattttaggg
ttttgtgatttggagaagtgggattctgtgaaagcagggtttgaaagtttgattaaattc
tccgttgataagagaccaaaggtgaggaggagtgcccaagaatgtcttgagaaggttttc
aagtcttttagatcttcttctgttgttaaggaagctagcaaattggtcttttcgttgttc
aaaaattacatgcctgtagcacttacattgagtgagtcaaggatttttgacgagtctaaa
gaagaaacattatcaaagctggaacatctagaggtcattcatatgctaaatcttctgaag
gttactgttccgtatctctcggttaaaatcagttcaaaagttttgccagaactagttaag
cttttgaggtctgatttctcagtgctaacgaggcagatttttcaaaatattgaagcattt
tttgtgagttcaagtgatgaagtgattggtccgcatcaggagaacattatagattctctt
tctgggtatttatctctgggacaaaagaatcctgtggacactgtattgtctgccgccacc
ctgctaagaactattttagataaacttcgagctggaggatcaagctcttggatgagtaat
ggacataaaatttttggttctacagcaggtcttttgactgatgaggctactgcatcacag
gcttcagatataatgaaggagttgatcaaccactatatagatccaaaagaagtcgtgatt
aatgaaagtcaatcacttgatgattcaagtcaagagagtgaagaagcaaatatgataaaa
ttaacatgcgctgtcatggagaatattctgaattcatgtgatggaattccgaatgaacac
cttttgggagtcatatctgttttgttcaagaagcttggagatatatcgcatatcttcatg
aagaacatcatccttaagcttgcagacttgatgaatgatgttggttgtgataaaccagac
acaaatcatcttcaaaattgcatgggatccgcagtggttgccattggtccggagaacttg
cttatgctcctacctatctccattgatcctgacaattttacatgttcaaatatctggttg
gtacccatattgaaagaccatgttgttggagcttcgctagggtattatatggagcacatc
gtgcctcttgcaaaatcctttaagcaagctggtcagaaagttagaaaatcagtaattggt
caagatctgcaggctcatgctcatggcctctggggactgcttcctgccttttgtcggtat
cctgttgatactcacaaaaagtttggagctttggctgaacttatgattacttctcttaag
aagtactccttcatgcatcagaatatcgctgttgccttacaggttctcgtgaatcaaaac
agaagtgtgatgttgtctaaaagtgatggtggtgcctcaaatgacaatgaagtaaaagtt
tctgttttagagtgccaaaatgtagccacttgttccaaaaaaactgcaaccaaaaacatc
aaagctttggcatcatgttcttcaaagttgcttcatgctctagctgacttatttgttgat
tcacagtctgggaagccctcgtatataaaggatgctattgcatgcttggcttctatcagc
aattcttctgtcacccagaaagttttcatgtcactgcttaagaggtttcggtttgtaact
ggtgaaggtgaatttcaacagccaaagagtgatggtgatgaattgattgaggaagaagta
cgcaacttgaatgtacaagagaaagatgtacataggtgtgtgatgatggagcttgcatct
tctctcgttgttggagccaaaacagatttcattgatctgatatataactttgttgtcttc
atctttcgggctactgatgtaactggtcattgtgaagcataccacactctgagcagaatt
ttacaggaacacgcatggttttgttcttctcggtttgtggagctgattgacttattactt
ggcctgaaatctcctgctgatgttgcaactcttaaaaatcgatttgcttgtttccatatt
ctcatagttcatgcattagagatgaactcagaggagaaaaatacaaaggcttttcttatg
cttaatgagatcatactcatcttgaaggatgcaagggaagaagctaggaaagtggcttat
gatacactcctttttataagttcctccttgtgcaactcatcttgtgccacttccagagaa
gcttatcaaagactgatcaacatgataacaggttatctctctggttcgtctccctacatc
acaagtggagcagtatctgcactgtctgtactattatataatgatacagaaatctgtctt
aaagtgcccgatcttgttccctctctcttatcattgctgcaaaacaaagctctggaagtc
ataaaagctgttttgggcttcacaaaagtattagtatcttgcttgcatgcaaaagacctg
cagaattttctatctgacatcatcattggagttcttccctggtcttctgtctctagaaac
catttcagatcaaaggttacagtcatactggagattatgatacggaagtgtggttcttct
gcagttgagttagatatcccagagaaacataagagttttttcaagactgttttgcagaat
cgccatcataagtcaacttccaaggaagctggcaaaaatgaaacagaaaaaacgcctgca
gatatatcacctaagagggtgaggaagccaaagaacaaggaattgggttctgtacctggg
agaactggctcagtgcatcccgggaagagaaagagggagaagaaacacaatgagaaccct
cccacctcaagcaagcctggtatatcaactggtgatggtagtggacgtgaaggggctaaa
agagcaaggcactttgagcatgaaaaatcaatcaaggttcggtcagaggatggttggaag
aagaggaattttaacaaagagcaaactggtgatgggaaaagaaagatggagcatagggac
acgaacaagaaaggcaaagcgtcatttcgtggacctagttctgcttccaaattacacaaa
ccccagaaagcatggaagaaacagaaactcaacaactga
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